prot_S-dermatodea_contig90561.17141.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig90561.17141.1
Unique Nameprot_S-dermatodea_contig90561.17141.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length56
Homology
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BLAST of mRNA_S-dermatodea_contig90561.17141.1 vs. uniprot
Match: A0A7S3QIX9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIX9_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.080e-6
Identity = 21/45 (46.67%), Postives = 35/45 (77.78%), Query Frame = 0 
Query:   12 FVPRKGAAVDAPEDYGYLASVLVNGRDRRTEVIILDAADVSKGPI 56
            F  RK  A +  ED GY+ S+L+NG+++++E++ILDAA +S+GP+
Sbjct:  522 FAQRKSDASNGEEDDGYIISILLNGKEKKSEIVILDAAKISEGPV 566
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BLAST of mRNA_S-dermatodea_contig90561.17141.1 vs. uniprot
Match: A0A1Z5K710_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K710_FISSO)

HSP 1 Score: 48.5 bits (114), Expect = 4.660e-5
Identity = 23/45 (51.11%), Postives = 34/45 (75.56%), Query Frame = 0 
Query:   12 FVPRKGAAVDAPEDYGYLASVLVNGRDRRTEVIILDAADVSKGPI 56
            + PRKG  V   E+ GY+ SVL +G+ + +E+IIL+A+DVS+GPI
Sbjct:  490 YAPRKGGEVS--ENSGYILSVLYDGKKKESELIILNASDVSRGPI 532
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BLAST of mRNA_S-dermatodea_contig90561.17141.1 vs. uniprot
Match: A0A547P8V6_9SPHN (Dioxygenase n=3 Tax=Erythrobacter TaxID=1041 RepID=A0A547P8V6_9SPHN)

HSP 1 Score: 47.8 bits (112), Expect = 8.690e-5
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0 
Query:    7 APQSTFVPRKGAAVDAPEDYGYLASVLVNGRDRRTEVIILDAADVSKGPI 56
            A +S  VPRKGAA    ED GYL + L++     +E+ ILDA+DV+KGPI
Sbjct:  415 ASESPMVPRKGAAS---EDDGYLVTFLIDENSGTSELAILDASDVTKGPI 461
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig90561.17141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S3QIX9_9STRA1.080e-646.67Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5K710_FISSO4.660e-551.11Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A547P8V6_9SPHN8.690e-552.00Dioxygenase n=3 Tax=Erythrobacter TaxID=1041 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004294Carotenoid oxygenasePFAMPF03055RPE65coord: 11..52
e-value: 1.0E-5
score: 24.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig90561contigS-dermatodea_contig90561:354..521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig90561.17141.1mRNA_S-dermatodea_contig90561.17141.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig90561 354..521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig90561.17141.1 ID=prot_S-dermatodea_contig90561.17141.1|Name=mRNA_S-dermatodea_contig90561.17141.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=56bp
PRPPPSAPQSTFVPRKGAAVDAPEDYGYLASVLVNGRDRRTEVIILDAAD
VSKGPI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004294Carotenoid_Oase