mRNA_S-dermatodea_contig128.1711.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: D7FPS0_ECTSI (Myosin heavy chain, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS0_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.170e-60 Identity = 98/107 (91.59%), Postives = 104/107 (97.20%), Query Frame = 1
Query: 1 MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKERLEILG 321
M RVREEH+RLQGVV SLN+KISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRV+EAENVLQKNDKVQKLE+ECDWYR+EALRLDSFNTAMKKDLKYMK +LEILG
Sbjct: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILG 107
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: A0A835Z8J0_9STRA (Putative myosin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J0_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.220e-46 Identity = 79/107 (73.83%), Postives = 94/107 (87.85%), Query Frame = 1
Query: 1 MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKERLEILG 321
M RVREEH +Q V+ +LN KIS VL+KQEGDFLAAYRAHMYTVQKELQ+LRQRVV+AE LQ+NDKVQ+LE+ C+WYRREALRLDSFN+AMKKDLK M +++ +LG
Sbjct: 1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVLG 107
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: A0A7S2XXS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXS8_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.250e-43 Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 1
Query: 52 LNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKERLEILGE 324
LN KIS VL+KQE DFLAAYRAHMY VQKELQ LRQR V+AEN LQKNDK+QKLE EC+WYR+EALRLDSFNTAMKKDLKYMKE+LEIL +
Sbjct: 4 LNDKISGVLSKQESDFLAAYRAHMYNVQKELQALRQRAVDAENALQKNDKIQKLEEECEWYRKEALRLDSFNTAMKKDLKYMKEKLEILED 94
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: A0A3F2RK62_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RK62_9STRA) HSP 1 Score: 128 bits (322), Expect = 9.860e-36 Identity = 67/106 (63.21%), Postives = 85/106 (80.19%), Query Frame = 1
Query: 1 MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKERLEIL 318
M VRE+HA+L VV SL++KIS VLA+QE DFLAAYRAHMYTVQKEL +R+++ E V K++K++K+E+E DWYR+EALRLD+F T M KDLKYMKE LE +
Sbjct: 1 MAVVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYTVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAI 106
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: A0A662X445_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X445_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.010e-33 Identity = 68/108 (62.96%), Postives = 85/108 (78.70%), Query Frame = 1
Query: 1 MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKERLEILGE 324
M VRE+HA+L VV SL++KIS VLA+QE DFLAAYRAHMYTVQKEL +R+++ E V K +K++K+E+E DWYR+EALRLD+F T M KDLKYMKE LE + E
Sbjct: 45 MALVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYTVQKELHEMREKIHRNETVENKTEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAIEE 152
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: A0A225W5V9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5V9_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.250e-33 Identity = 68/108 (62.96%), Postives = 85/108 (78.70%), Query Frame = 1
Query: 1 MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKERLEILGE 324
M VRE+HA+L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++KLE+E DWYR+EALRLD+F T M KDLKYMKE LE + E
Sbjct: 42 MAMVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKLEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAIEE 149
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: A0A6A3F344_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F344_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.620e-33 Identity = 66/106 (62.26%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 1 MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKERLEIL 318
M VRE+HA+L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+E+E DWYR+EALRLD+F T M KDLKYMKE LE +
Sbjct: 42 MALVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTIMTKDLKYMKENLEAI 147
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: A0A8J5J7K0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J7K0_9STRA) HSP 1 Score: 122 bits (305), Expect = 4.550e-33 Identity = 63/101 (62.38%), Postives = 81/101 (80.20%), Query Frame = 1
Query: 1 MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKE 303
M VR++HA+L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+E+E DWYR+EALRLD+F T M KDLKYMKE
Sbjct: 45 MAIVRQKHAQLHDVVGSLSEKISSVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKE 145
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: A0A833T8Y6_PHYIN (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T8Y6_PHYIN) HSP 1 Score: 127 bits (318), Expect = 1.700e-32 Identity = 66/108 (61.11%), Postives = 85/108 (78.70%), Query Frame = 1
Query: 1 MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKERLEILGE 324
M VR++HA+L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+E+E DWYR+EALRLD+F T M KDLKYMKE LE + E
Sbjct: 45 MAIVRQKHAQLHDVVGSLSEKISSVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLESIEE 152
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Match: A0A6A3TYV6_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TYV6_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.580e-32 Identity = 66/106 (62.26%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 1 MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVVEAENVLQKNDKVQKLENECDWYRREALRLDSFNTAMKKDLKYMKERLEIL 318
M VRE+HA+L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+E+E DWYR+EALRLD+F T M KDLKYMKE LE +
Sbjct: 42 MALVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTIMTKDLKYMKENLEAI 147 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig128.1711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig128.1711.1 >prot_S-dermatodea_contig128.1711.1 ID=prot_S-dermatodea_contig128.1711.1|Name=mRNA_S-dermatodea_contig128.1711.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=109bp MVRVREEHARLQGVVFSLNQKISQVLAKQEGDFLAAYRAHMYTVQKELQTback to top mRNA from alignment at S-dermatodea_contig128:20054..20862- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig128.1711.1 ID=mRNA_S-dermatodea_contig128.1711.1|Name=mRNA_S-dermatodea_contig128.1711.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=809bp|location=Sequence derived from alignment at S-dermatodea_contig128:20054..20862- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig128:20054..20862- >mRNA_S-dermatodea_contig128.1711.1 ID=mRNA_S-dermatodea_contig128.1711.1|Name=mRNA_S-dermatodea_contig128.1711.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at S-dermatodea_contig128:20054..20862- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |