mRNA_S-dermatodea_contig8986.17066.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8986.17066.1
Unique NamemRNA_S-dermatodea_contig8986.17066.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: D7G3A2_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A2_ECTSI)

HSP 1 Score: 484 bits (1246), Expect = 1.170e-162
Identity = 216/377 (57.29%), Postives = 275/377 (72.94%), Query Frame = 1
Query:    1 DGRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIVESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKEEDWKAIYDLFSANWDFG-ELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIEDLMAPHFTLFDKTGPNTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLY----------ADEATRESAKERSRDLDFGLFPQGE 1098
            DGRWG++ VP VD D+ + LGADV+GRMRSPWNVN R YLTRG GEMCG+ ST FY WP C +HY+LQ+  +SYYGYTW SQYGPHGPVHVW+GGN+DCKK++  V +I+G EY   + GY F+ RK +FRD +FKC G A+   + E++M  G CGCLD D+ + +D+K ++  F++ + F  E T+ + + LA Q+CNG +G+GESSQSSSPLDPTFWS+HPTMERLL+FK+  GT TD+SWPDEVG + G DG  YDVIIST SDTCNGHRGSD+FPY I+ D++ P FT + K  PNT  NR L++LFDPS NAL +IYDNFEW HC+  GYD ++ +             A+ E   E +R   FGLF QG+
Sbjct:  210 DGRWGSVPVPIVDEDERNFLGADVYGRMRSPWNVNSRPYLTRGLGEMCGLDSTEFYSWPGCSSHYDLQDKFNSYYGYTWWSQYGPHGPVHVWVGGNVDCKKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFADFSVSEEDIMTSGQCGCLDYDLHEGDDYKKVWTAFTSFYTFDQEFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGTWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYGKKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASDEEKSESTRVEGFGLFKQGD 586          
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: A0A6H5K0B2_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B2_9PHAE)

HSP 1 Score: 483 bits (1242), Expect = 7.380e-160
Identity = 217/377 (57.56%), Postives = 278/377 (73.74%), Query Frame = 1
Query:    1 DGRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIVESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKEEDWKAIYDLFSANWDFG-ELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIEDLMAPHFTLFDKTGPNTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLY-------ADEATRESAKERSRDL---DFGLFPQGE 1098
            DGRWG++ VP VD D+ + LGADV+GRMRSPWNVN R YLTRG GEMCG+ ST FY WP C +HY+LQ+  +SYYGYTW SQYGPHGPVHVW+GGN+DCKK++  V +I+G EY   + GY F+ RK +FRD +FKC G A+   + E+VM  G CGCLD D+ + +D+K ++  F++ + F  E T+ + + LA Q+CNG +G+GESSQSSSPLDPTFWS+HPTMERLL+FK+  GT TD+SWPDEVG + G DG  YDVIIST SDTCNGHRGSD+FPYGI+ D++ P FT + K  PNT  NR L++LFDPS NAL +IYDNFEW HC+  GYD ++ +         + T  S +E+S+      FGLF +G+
Sbjct:  375 DGRWGSIPVPIVDEDKRNYLGADVYGRMRSPWNVNSRPYLTRGLGEMCGLDSTEFYSWPGCSSHYDLQDKFNSYYGYTWWSQYGPHGPVHVWVGGNVDCKKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFADFSVSEEDVMTSGQCGCLDYDLVEGDDYKKVWTAFTSFYTFDQEFTEEEMRILATQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYGIMSDVITPQFTFYGKKAPNTMQNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASEEEKSKTTRVEGFGLFEKGD 751          
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 6.430e-100
Identity = 161/395 (40.76%), Postives = 236/395 (59.75%), Query Frame = 1
Query:    1 DGRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIVESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKEEDWKAIYDLFSANWD-FGELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIEDLMAPHFTL-----FDKTGPNTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLYADEATRESAKERSRDLDFGLFPQGERRGQLYGERSLRELAKQLKKGKE 1167
            DGRW    +P+V  +   L+  DV+G++R+PWNVNDR+YLTRG GE+CG      + WPTC +HY+L    S +Y + W S Y PHGPVH+W+GG +DC++  + +E ++G    S +   SFI+RK L+RDG+FKC+GRA+   ++EEVM    CGCL  ++ +  D++ IY   S   D  G+     K+ +    C   +  G+  Q+SS LDP+FWS HPTMERL M+ + TG +TD+SWPD    +T  DGTV    +S   ++C GH GSDVFP+G++ D     F +     F+    N  +NR+ ++ FDP +NAL Y+YD F W HCAA GYD  + +   +T++S    +R      F  G  R  +Y   +L+ +A+   K +E
Sbjct:  396 DGRWAFTEIPRVFENNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMEKAFPWPTCTSHYDLATGYSDFYSWVWQSLYDPHGPVHIWVGGVLDCEETYERIEGLVGKIAASQLAEQSFIHRKNLYRDGIFKCDGRADVAQSSEEVMLS-RCGCLGYNLTEGNDYERIYHTMSVIDDVIGDYDADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLWMYVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLL-DTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGDAWQ-SSTKKSKSTSARPA----FEDGVPRAPMYSS-TLKLMAEGKAKRRE 782          
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 9.230e-100
Identity = 159/380 (41.84%), Postives = 227/380 (59.74%), Query Frame = 1
Query:    1 DGRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIVESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKEEDWKAIYD-LFSANWDFGELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIEDLMAPHFTLFDKTG-------PNTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLYADEATRESAKERSRDLDFGLFPQGERRGQLY 1116
            D RW    +P+++ +    L  DV+ ++R+PWNVNDR YLTRG G MCGIP++  Y WPTC+THY+L      +Y Y W S Y PHGPVH+WIGG +DC++    + +++G E    +  +SF++RK L+R+G+F+C G A  G   EE++  G CGCL  D+ +  D++ I+D L  A+   G++ D  K+ +    C      G+  Q+SS LDP+FW  HPTMERL M+ I TG +TDF+WPD     T  DGTV    IS   DTC GHRGSDVFP+G++ D     FT+  KTG        N  +NR++++ FD   N+L Y+YD F+W HC A G + ++ + +   R  +  +SR      F +GE R   Y
Sbjct:  375 DSRWAFTPIPRMEVNNPGELTPDVYLKLRAPWNVNDRAYLTRGMGNMCGIPTSNTYPWPTCETHYDLATSYKDFYSYVWDSLYDPHGPVHIWIGGVLDCEQTYTTIRNLVGEEAAGELAMFSFVHRKNLYREGIFQCSGTAGVGQKPEEILSTGQCGCLGYDLTQGTDYQDIFDRLTMADSIIGDVDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFGLL-DSDTDDFTI--KTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAWENAKARGPSSIKSRPA----FKEGEVRRPRY 747          
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 7.210e-99
Identity = 148/358 (41.34%), Postives = 221/358 (61.73%), Query Frame = 1
Query:    4 GRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQI-VESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKEEDWKAIYDLFSANWDF-GELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIEDLMAPHFTLFDKT------GPNTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLYADEATRESAK 1053
            GRW N+ +PK+       +  DV+ ++RSPWNVNDR Y++RG G+MC   + TFY WPTC++HY L    + +Y + W S Y PHGPVH+WIGG +DC++   + +E ++G E    +   +F++RK +FRDG+F CEG      + +EV++ G+CGC   D+ + +D+  I++      +  G+  ++ K+ L    C+  I  G+  QSSS LDP+FWS HPTMERL M+ + TG +TDF WPD    +T  DGT Y   IS  S+ C GHRGSDVFP+ I+ + +   FT+          G NT +NR+++  FDP +NAL Y+YD FEW HCA  G+D+ + +  +   E+++
Sbjct:  357 GRWANVPIPKMREGNPSKIEPDVYSKLRSPWNVNDRRYISRGMGQMCHARAETFYPWPTCESHYNLATSFTDFYSWVWESLYDPHGPVHIWIGGVMDCEETYGVDIEHLVGEETALDLALMAFVHRKDMFRDGIFSCEGSVAVTESPDEVLESGVCGCHGYDLTQGDDYLQIFESMVFMKELMGDSDENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLWMYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVND-FTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWLAKGDEEASR 713          
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 7.880e-97
Identity = 159/395 (40.25%), Postives = 229/395 (57.97%), Query Frame = 1
Query:    1 DGRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIVESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKEEDWKAIY-DLFSANWDFGELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIEDLMAPHFTLFDKTGP------NTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLY--ADEATRESAKERSRDLDFGLFPQGERRGQLYGERSLRELAKQLKK 1158
            DGRW    +PK+  +    +  DV+ ++R+PWNVNDR YLTRG G+MC      +Y WPTC+THY+L    S +Y + W+S Y PHGPVH+WIGG +DC+K    +  ++GP     +  YSFI+RK LFRDG+F C G A       EV+  G CGC   D+ + +D+++IY ++   +   G+     K+ +    C   +  G+  Q+SS LDP+F++ HPTMERL M+ + TG +TDF+WPD+    T  DGTV    +S   +TC GH GSDVFP+GI+ D     F +  KTG       NT +NR+L++ FD   N+++Y+YD F+W HC A G+D N+ +  A +A   S+  R        F QG  R  +Y     +  A+  KK
Sbjct:  410 DGRWAYTEIPKMKVNDPGAVEPDVYSKLRAPWNVNDRPYLTRGMGKMCDAKVDEWYPWPTCETHYDLATGYSDFYSWVWYSLYDPHGPVHIWIGGVLDCEKTFGAIAELVGPSIAEDLALYSFIHRKNLFRDGIFSCVGSATVVQAPAEVLSSGQCGCRGYDLTQGDDYESIYYNIVDLDDLIGDFDADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFTWPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGIL-DSDTDGFEV--KTGVKGMENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFNDAWNGAAQARPTSSSRRP------SFKQGAPRAPMYNILEEKRAARAAKK 795          
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 1.930e-87
Identity = 144/360 (40.00%), Postives = 199/360 (55.28%), Query Frame = 1
Query:    1 DGRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIVESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKEEDWKAIYDLFSANWD--FGELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIEDLMAPHFTLFD-KTGP-------NTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLYADEATRESA 1050
            DGRW N  +P +DP     L  DV+G +RS W +N   YLTRG G++C       Y WP+C+ H+ L      +Y +   S Y PHGPVH WIGG ++C+  +  V S++G +  + +   +F  RK L+RDG F+CEG A  GT A+E++  G CGCL  D+ + +DWK IY   + ++D   G+  D  K+ +    C   I  G+   + S LDPTFW++HPTMERL MF   TG +TDF WPD    +T  DG +         DTC+GH GSDVFP+    DL+      F  KTG        N  +NR+++ + D   N L Y+YDNF W HC   G D  + + D +T  SA
Sbjct:  336 DGRWANTEIPAMDPSSPGELIPDVYGLLRSRWTINSSPYLTRGLGKLCDGSVVDTYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHGPVHTWIGGVLNCEDTISSVSSLVGEKNANSLSLKTFDQRKNLWRDGFFECEGSAAVGTPADELLSSGKCGCLGYDLSQGDDWKTIYTNSTVDFDDVIGDYDDETKRQVVAAVCASTIFDGDHLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWPDSEFSYTDSDGNIVVETTGIYGDTCHGHGGSDVFPF----DLLDGDDDAFQIKTGMPGNGETGNKLTNREVLAVLDARFNMLPYVYDNFRWDHCLKDGIDFEDAW-DASTSSSA 690          
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 2.090e-87
Identity = 146/368 (39.67%), Postives = 206/368 (55.98%), Query Frame = 1
Query:    1 DGRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTT-FYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIVESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKE-EDWKAIYDLFSANWDF----GELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIEDLMAPHFTLFDKTGP-------NTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLYADEATRESAKERSR 1065
            DGRW    +P + P     L  DV+G +RS WNVN   YLTRG G +C     T  Y WPTC+ HY +    S +Y + W S Y PHGPVH WIGG ++C++ M  V  ++G E  + +  Y+F  RK  +RDG F CEG AE G T ++V   GMCGCL  D+    +DW+ IY  +++  DF     +  D  K+ +  + C   I  G+  Q+ S LDPTFW +HPTMERL MF   TG   D  WPD        D +  + +IS   D C GH GSDVFP+ +++   + H     KTG        N+++NR+++   DP VN L+Y+YD F+W HC   GYD +  + D ++  SA+++++
Sbjct:  370 DGRWAYTKMPAMYPGNPGDLNPDVYGLLRSRWNVNSSPYLTRGMGTLCNTYDVTQIYPWPTCELHYWMATEYSDFYSWVWTSMYAPHGPVHTWIGGVLNCEETMASVSGLVGEENANSLALYAFDQRKNFWRDGFFDCEGTAEAGATEDDVFSAGMCGCLGFDLSSNSDDWQTIY--YNSTIDFDNVISDYDDETKRMVVAEVCASTIHDGDHLQAGSSLDPTFWPMHPTMERLFMFARLTGNTYDLDWPDA-------DASSSNEMISRYGDDCVGHGGSDVFPFNLLD---SDHDGFEIKTGMKGNPEIGNSFTNREVLAAMDPRVNQLSYVYDTFKWDHCLGSGYDFDTAF-DYSSTASAEDKAK 724          
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 1.310e-85
Identity = 133/347 (38.33%), Postives = 189/347 (54.47%), Query Frame = 1
Query:    1 DGRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIVESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKEEDWKAIYDLFSANWD--FGELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIED----LMAPHFTLFDKTGPNTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLY 1023
            DGRW    +P +DP     L  DV+G +RS W VN   YLTRG G++C       Y WP+C+ H+ L      +Y +   S Y PH PVH WIGG ++C+  +  + S++G +  + +   +F  RK L+RD  F CEG A  G  A+E++  G CGCL  D+ + +DWK IY   + ++D   G+  D  K+ +    C   I  G+   + S LDPTFW +HPTMERL MF   TG +TDF WPD    ++  DG       S   DTC+GH GSDVFP+G++ED           L ++   N  +NR+++ + D   N L Y+YD+F W HC   G D  + +
Sbjct:  163 DGRWARTEIPAMDPGSPGELIPDVYGLLRSRWIVNSSPYLTRGLGKLCDGSVVDMYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHAPVHTWIGGVLNCEDTISYISSLVGEKNANSLSLNTFDQRKSLWRDDFFACEGSAAVGAPADELLSSGKCGCLGYDLSQGDDWKTIYTNSTLDFDDVIGDYDDKTKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFYWPDSEFSYSDSDGNTVVETTSKYGDTCHGHSGSDVFPFGLLEDDDAGFKIKTGMLGNEETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYDAW 509          
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 3.270e-85
Identity = 136/348 (39.08%), Postives = 193/348 (55.46%), Query Frame = 1
Query:    1 DGRWGNMAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFYEWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIVESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMCGCLDLDMEKEEDWKAIYDLFSANWD--FGELTDSQKQTLAFQYCNGVIGIGESSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGTVYDVIISTESDTCNGHRGSDVFPYGIIED-----LMAPHFTLFDKTGPNTYSNRDLVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLY 1023
            DGRW    +P +D      L  DV+G +RS W VN   YLTRG G++C       Y WP+C+ H+ L      +Y +   S Y PHGPVH WIGG ++C+  +  + S++G +  + +   +F  RK L+RDG F CEG A  G  A+E++  G CGCL  D+ + +DWK IY   + ++D   G+  D  K+ +    C   I  G+   + S LDPTFW +HPTMERL MF   TG +TDF WPD    ++  DG       ST  DTC+GH GSDVFP+G+++D      +       ++TG N  +NR+++ + D   N L Y+YDNF W HC   G D  + +
Sbjct:  334 DGRWARTEIPAMDLGSPGELIPDVYGLLRSRWTVNSSPYLTRGLGKLCDGSVLDTYAWPSCEEHHNLVMDYDDFYSWVSESMYSPHGPVHTWIGGVLNCEDTISSISSLVGEKNANSLSLNTFDQRKNLWRDGFFACEGSAAVGAPADELLLSGKCGCLGYDLNQGDDWKTIYTNSTLDFDDVIGDYDDETKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFHWPDSEFSYSDSDGNTVVETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGMQGNEETG-NKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAW 680          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8986.17066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3A2_ECTSI1.170e-16257.29Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5K0B2_9PHAE7.380e-16057.56TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LC42_ECTSI6.430e-10040.76TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
A0A6H5J7R8_9PHAE9.230e-10041.84TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5J676_9PHAE7.210e-9941.34TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D8LC46_ECTSI7.880e-9740.25Tyrosinase_Cu-bd domain-containing protein n=3 Tax... [more]
D7FW00_ECTSI1.930e-8740.00Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]
A0A6H5JRR4_9PHAE2.090e-8739.67TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D8LB18_ECTSI1.310e-8538.33ShTK domain containing protein n=1 Tax=Ectocarpus ... [more]
D7G9A4_ECTSI3.270e-8539.08Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8986contigS-dermatodea_contig8986:1487..8816 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score161.8
Seed ortholog evalue6.5e-37
Seed eggNOG ortholog44056.XP_009039156.1
KEGG koko:K14347
KEGG TC2.A.93.1
EggNOG free text desc.symporter activity
EggNOG OGsCOG0385@1,KOG4821@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTyrosinase copper-binding domain
Ec32 orthologEc-07_005640.1
Exons6
Model size1553
Cds size1152
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8986.17066.1prot_S-dermatodea_contig8986.17066.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8986 1505..8433 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925376.7911236-UTR-S-dermatodea_contig8986:1486..15041622925376.7911236-UTR-S-dermatodea_contig8986:1486..1504Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8986 1487..1504 +
1694079891.7092094-UTR-S-dermatodea_contig8986:1486..15041694079891.7092094-UTR-S-dermatodea_contig8986:1486..1504Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8986 1487..1504 +
1622925376.8786304-UTR-S-dermatodea_contig8986:8433..88161622925376.8786304-UTR-S-dermatodea_contig8986:8433..8816Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8986 8434..8816 +
1694079891.8153408-UTR-S-dermatodea_contig8986:8433..88161694079891.8153408-UTR-S-dermatodea_contig8986:8433..8816Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8986 8434..8816 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925376.80451-CDS-S-dermatodea_contig8986:1504..16521622925376.80451-CDS-S-dermatodea_contig8986:1504..1652Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 1505..1652 +
1694079891.7254667-CDS-S-dermatodea_contig8986:1504..16521694079891.7254667-CDS-S-dermatodea_contig8986:1504..1652Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 1505..1652 +
1622925376.8143065-CDS-S-dermatodea_contig8986:2966..31001622925376.8143065-CDS-S-dermatodea_contig8986:2966..3100Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 2967..3100 +
1694079891.7352731-CDS-S-dermatodea_contig8986:2966..31001694079891.7352731-CDS-S-dermatodea_contig8986:2966..3100Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 2967..3100 +
1622925376.8240945-CDS-S-dermatodea_contig8986:3966..41611622925376.8240945-CDS-S-dermatodea_contig8986:3966..4161Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 3967..4161 +
1694079891.7450488-CDS-S-dermatodea_contig8986:3966..41611694079891.7450488-CDS-S-dermatodea_contig8986:3966..4161Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 3967..4161 +
1622925376.8394504-CDS-S-dermatodea_contig8986:5798..59921622925376.8394504-CDS-S-dermatodea_contig8986:5798..5992Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 5799..5992 +
1694079891.7649212-CDS-S-dermatodea_contig8986:5798..59921694079891.7649212-CDS-S-dermatodea_contig8986:5798..5992Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 5799..5992 +
1622925376.8523066-CDS-S-dermatodea_contig8986:6363..64781622925376.8523066-CDS-S-dermatodea_contig8986:6363..6478Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 6364..6478 +
1694079891.7804606-CDS-S-dermatodea_contig8986:6363..64781694079891.7804606-CDS-S-dermatodea_contig8986:6363..6478Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 6364..6478 +
1622925376.8659544-CDS-S-dermatodea_contig8986:8067..84331622925376.8659544-CDS-S-dermatodea_contig8986:8067..8433Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 8068..8433 +
1694079891.8039076-CDS-S-dermatodea_contig8986:8067..84331694079891.8039076-CDS-S-dermatodea_contig8986:8067..8433Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8986 8068..8433 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8986.17066.1

>prot_S-dermatodea_contig8986.17066.1 ID=prot_S-dermatodea_contig8986.17066.1|Name=mRNA_S-dermatodea_contig8986.17066.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=384bp
MAVPKVDPDQADLLGADVFGRMRSPWNVNDREYLTRGCGEMCGIPSTTFY
EWPTCQTHYELQELLSSYYGYTWHSQYGPHGPVHVWIGGNIDCKKDMQIV
ESIIGPEYMSLIIGYSFIYRKGLFRDGLFKCEGRAEEGTTAEEVMQQGMC
GCLDLDMEKEEDWKAIYDLFSANWDFGELTDSQKQTLAFQYCNGVIGIGE
SSQSSSPLDPTFWSLHPTMERLLMFKINTGTMTDFSWPDEVGLFTGDDGT
VYDVIISTESDTCNGHRGSDVFPYGIIEDLMAPHFTLFDKTGPNTYSNRD
LVRLFDPSVNALNYIYDNFEWPHCAAQGYDMNNLYADEATRESAKERSRD
LDFGLFPQGERRGQLYGERSLRELAKQLKKGKE*
back to top

mRNA from alignment at S-dermatodea_contig8986:1487..8816+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8986.17066.1 ID=mRNA_S-dermatodea_contig8986.17066.1|Name=mRNA_S-dermatodea_contig8986.17066.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7330bp|location=Sequence derived from alignment at S-dermatodea_contig8986:1487..8816+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GATGGCCGCTGGGGTAACATGGCTGTCCCCAAGGTTGACCCCGACCAGGC GGACCTCCTCGGCGCCGACGTTTTCGGGCGGATGCGCTCCCCCTGGAACG TGAACGACCGCGAGTACCTAACCCGCGGTTGCGGCGAGATGTGCGGCATC CCCAGCACCACATTCTGTGAGCTCCTGAGATGATTTGCCGCTGATTATCT TGCCACACGTGTGTTATACTGTATGCTCCCTCTGTTTCCGTGTGTTTTGT GTCGATTCCGTACTATTGTGCGATTATACATGGGTGGTTCCGTAGGGGTT TTTTGGATCTCTCGATTTTTTTTCATGTGACCACGAGCGAGCGGGATCGG CAACAATTCGTTCGTGGCCCGGTCGGTTGGTTTGTAATTGTGTTATTAAT AGTCAACCAATCAAAGACTCAAACCGTGTGCTTTGCGTTGGGTGTTGTCT TGCTTGATGCTTGATGTATACATGTATAGAGCTATGTGTGTGTATGGTTC GATCGAGGCTGTTTTTTGTGGTCTGTATCATACAAGCACAAAGTATGCAT TATTTGCCGTTACAGCAGTACCGTATTTTGTTCAGGTGTGGTTTTGCGTT TTGCCGTGACGTGTGATGTGACTGCGGCTGGCTGAATGCATTCGTGTTTT TTCTTTTTCTTTTTTCTTCCCCAGATCGGTTTCATGCGTGTGTGTGCGAG ACTCGTGCGTGCAACAACAGCAATAATAGAACTAGAAGAACCTCAATGTA GCCCTCCCGTTGTTTCCGTTCGATGATGATGCCATAAAAGTATTTACCGC TGGTGTCGCTCGTCGTCGTTGGTGCGTTTGTCAGGGACCGGTGACAGGTG CTTTAGTCCCACTCTCTCGCGAGCGCGTGTTTGTATATACCAACGATTAT CAACAGTACTGTTCGCGTTTATATTTGCGAACGGTGCGCGCGTTTAAGAA GTGCCTGCGCATAAAACCGCCGCGGTCTTGTGTTGTTAACGCTTGCCGAG AGATGTGTGTGCCGGGTAAAAATCGCCTTGTCAAGCGCTCCCGCTCCCGC TCCACATGCAACTTCCGGTCGGCGGCCACGTGAGCTGCTACCCCCCCCCC CCCGGGCATGTTTGGGGATGCGTGGTCGATGTCCGTTTCGATACGACTTG CGTTAAACAGAAGTACCCCCCCCCTCCCGCCCATGGGTTGGCGTCGCAAA CGCAAGGATCATGGCTATCATAGCAGCTGGTACCATTCTTGTGAAAAGCA GCCTGGCCGGCGACAGCCGGGAATATCGCTCCGTCCCGGCGTTGTTGGGA CGCGTGGTATTTGTCCGCCTGGATACGACATGCGTTTAACATAAGTACAA CCCCCCCCCCCCGGACGCCTGTCTTGAGCCTGATGCATTTTTGTTGACGC TTTCTGCCCGCACCCGTCGTCATCCCACGTCCTCTCTTTTCACCCCCCCC CCACCCCTCCCCCCCGCCTTCCCCCCCCAGACGAGTGGCCCACTTGCCAA ACTCACTACGAGCTACAGGAGCTACTGTCATCGTACTACGGCTACACCTG GCACTCCCAGTACGGTCCCCACGGGCCTGTGCACGTGTGGATCGGCGGCA ACATCGACTGCAAGGTCCGTGCATATTCAGAGATAGTTTGTCACGATAGT CGATGACTGGAGATATGTACCGCCGTCGCTCGCCGCCAGCTTTGCGTACG GGTGCGTGCGCACAAGCTTGTCGTTGTGGTTTGCCTGGGGGCGGGGGGGG GGGGGGGGGGGGCGAAGACCCGGGGATTCGAGGAAATTTGCGGCCTTGTG TGTGTGCTTACTATAACGCCCACGCAACAGTCACAATAGTCGAATTAAAT TAACCAGCAGTGCCCCGCGTGTAGGCACCGCCGTTGCCACCGAGCTCTCA CTCACAACTTAGCGGTGCTAGCACCCCCCCCCCCGGCCTCCCAATGCACG TTTATGATCCCCACCGAAACGATACTGTACATGGATTTCCAAAACATAGA GCGAGCGTTGGGGGTCCAACTGTTTTTCAAGCGAGGAAAGATTAACCAAG CTACGCCTATTATGGAGGCGTTCGTTACGTATGATGCCATCGTTGACGAT GTCTATGATGCTGTGGGATCAATTATGGAAATGTTCTTGTCTGTGCGCGA TATCGTGGTGGTTTTAAAATTCTGAAAATTGTGCGCTTTGTGGAGCAATA ACATTTGTCCGTGACTCCATAAAATTTTGTGATTGTGTGTGAGCGTAGGG ACCTGTTTGCGCCATCCTCGTATTTGTAGAACCTCTCATTGCTCGTCCTT GCTACTGTCAATAGTATGCAATATTTCGTTGTGTATTATTGTTTTGACCC TCACCCCTGTCTGTACCACACCCGATTCGCGCCTGTTTCTACCACTTTGT GCGTGCGCAAACAAACGCGCCATGTCCCTCTCCCTTCTCTTTTTGGGCGT CTCGGGAACTCGGGAATCCCATCCCAACAGAAAGACATGCAGATCGTGGA GTCCATCATCGGGCCGGAGTACATGTCGCTCATCATCGGCTACTCGTTCA TCTACCGCAAGGGTCTGTTCCGCGACGGGCTGTTCAAGTGCGAGGGCAGG GCAGAGGAGGGCACTACCGCTGAGGAGGTCATGCAGCAGGGCATGTGCGG CTGTCTCGACCTGGATATGGAAAAGGCGCGTGTTTACGTGTATTAATTTG CCCTACGACTCATTTGTAGACAACTCTGATATGTACATGATTGATTGATT GATTGATTGATTAATTGATTTGCACACGTGCAGACGATCGGTTTATTCCG ACCCGACTTGTGGTCAGATGCGCACAGAGCCAAAGAGAAAACGACTCATC ATAACTCTACTTCTACTAAACAGAATACCGTCACTGGTTCCTACTATAAT AGCACAAGAAGTAAATCATGGGCATGCAGAAATAACAAACTCCAAGAGAC GCTTTCGCCAATATTTTATACGTTTATCCAATATTTGTCAGACCCAACCC TCTTGAGTAGGGCTCCGGCATGGCCTCTACAGTACTTGATTTGCTCATCC CTGACACTTGTCACAAACAGCGTGTACGCCAACCTCAAAGGCGCGTAGTG CATTGAATTACTGCAAATATGAACGCTCTGCCATGCATATATGACTTTTT GGGCCGAATTAATGAACTACGCGATTCTTCCGAGCAATTTTTAACTTTCT CTCTGAGTATTACAAAAACACGCGAGAGTTTGTTCTATCCCTAACCTCCC CCCCCCCCCCAGTCGCCTGTGATGTTCACGAACCGACATATTCCGATCAA ATTGTTTTGGGGACTTATCACTGCGACGCACGCCACACGGGCGTAGCCGT ACCTACCCACTAACGGGCATAGCCGTGGCTACCCACTTAAAGTCTCATTT GTGTTGTTGTTAAGTACCACGGAATAGTACTATAGCAGCAGTATATGTGT GTGTGTGTGTGTGTGTGTGCGTTTTTATACGTTTGATATCTTCTTGGTTT ACACACACACACACACACACACACACACACACACACGCATGCACGCATGC ACGCACGCACGCACACACGCTCCGCTCCGCTCAACGCATCTCCGCGAGTG GCTGTTTGAGGGTCGCGCCGATGCGGGCCCTTTTATAACCCCATCGTGTT GCGCAGCCTATCGGTACATGGGATACACCAGCACCTCGTTTTTCCCGCGG TATCCTACCCCCCCCGCCCGCACGCGCTTGTCCAATCAACCCATGGAAAA TCCGGTTTGGTGTCGCAAAAGAAAGGATAAATAGCACAGCTGGTATCATC CTTGTGAAAAAGCAACTTGGCCAGTGAAACCCTGGCCTCTCGCCTCGTAC TGGCATTGTTTTCATGCGTGGTCTATGTCCGTTTGGATTCGACATGCGTT GAAAATGTACCCACCCACCCACCCCACCCACCACCCCCCACCGCGCGCGC TTGAATTGCCGGTGCAAAGGGTATCCCCGCACGGTATCATACCTTGATGA ATCATGGCTGAGAATACTGTTTTGTTGACAACCATCGGTGACGCGTACGC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTCCCTCCCCTTC CCCCCCCCCTTTTTTCCTCTCTCGAGGTGGGGGGAAGGGAAGTGCAACCA TGTTTTTNNNNNNNNNNCCCCCCCGGGATCCATCGTTACTTAAAGAAGGC GGCGGAAACAGTTTTGTTGCCCACCCTCCGGGCCCCCCCCCCCCCCCCCC CCCCCCCCTTCCTGCCCATGTGCCGCCTTCGTTACCTCTACCACATCTCT TTGTCCACTCAGGAGGAGGACTGGAAGGCGATCTACGACTTGTTTTCGGC GAACTGGGACTTCGGCGAGCTGACAGACTCGCAGAAGCAGACTCTGGCGT TCCAGTACTGCAACGGCGTCATCGGCATCGGAGAGTCGTCCCAGTCCAGC TCTCCGCTCGACCCGACCTTCTGGTCCCTACACCCTACAATGGAGCGCCT CCTTATGTGAGTTGTGATTTGTCGGAACACTTCTGATGGGCGACGACGCT TCTGACTTGTGTTTTGGTTTGACCTAGTAAGTGCTGGAGTGGTGTTTACT TTTTGTCAATTTTGTCGCGTGCGCGATCACGGCGTAGAAACGCCACACCG TGCCTTACCGACTGGCGAGACACGAGAGCTTTACGGCGTGTAGCCCTCCC ACCCAACCGCGAAACAAGCAAATTAATTCAAAATCATAGAGCGAGCGTTC CCCCCCCCAGCCCCTCTCCCACGCGCCCCTTGCGAACGCTCCGACGCTGC CGCTACCCCCCGTGTCTTCGTCTGTGGCTACACCCCGTTCTCCTCCCACC CTTGTGTGCCCCTCCCGTTTGCGATAGGTTCAAAATCAACACGGGAACGA TGACTGATTTTTCCTGGCCCGACGAGGTCGGACTGTTCACCGGAGACGAC GGGACCGTGTATGACGTTATCATCTCCACCGAGTCCGACACGGTAAGCCC GCACCACACGGCTGACTCCTGCGCGCTACGCTTATTCGATGGGCGCGACC TCGCCTCCCGATCCCCGCCCCCCGTGTATGACTGAACTGGGAAAATACTG AAAGGTTGTGATAGGACATGCTTTTGATGTATGGGGGAGTCAGGCGAAGG CAGTAGCGGTATTGGGGAGGTAAGAAGCGGCTCGCACAAGGCGACGGTTA AAGAAAAGAGATAAGGGGAAAATTGTTTTTGAGCCACACCTTTGATACGG TAGGAAGGGACGGCTGGCTATCGGCGATCGACCCTGTGAGAACAGTGCTC TATCCTCCCGATAACGCGCGGTCAATGGCCTAACAGCTGACGCATCCGAA GCTTGAGTGCGCCCCCCCCCCCCTTCCAAAAGAGGCACGATATGCCTTCG AACAAGGTACTTGAGCCCTGGCATTCACCCCCATTAAAAGCAAGGCAAGG CTCAAGTACCCTTGACTATGGATCGTGTATGGGAAAGCTGTTCTAAAGAT GTGGACACTGCAGCGAGTGTTTTAGGCCTTGTATTTCGTGGGAGTAAGGA CGTCGTGGCAGCAGTGCAGCAATAGCGGCTTTGGAGCCCCCCCCATCAGT GAAGAAATAGGGTTCAAGAACAACCTGCATGAACCAATGGATGAAGGGGC AAAATGTTGAAGGTCAACTTCAGGACTGGAGATAATAACCTTCGGTTGCG TAGACGGAGATTTAGAAAAGTAGGCGAGGAAGGCGAGGACAATGTGATTG CGGTTCGGATAAGAGTGTGAAGACCGTGTCTATGTAGTGGCGGAATGCCC TTTTTTCTGAAAAGGAGAGAATGGTACTTGCATGTACGACCGAACTGGGA AAAATAGAAGGCCGTGAGACGAGAGGCTTTTGAAGCATAGATGATGGCGG TAGCTAGACTGGGGGAAAAGAAGAGGCCCGAGAAGACGAGACGTGATGTA GATGAATAGGAAATACAAATTTTGCGCCACCTTTGGCTAAGCAGGCAAGA ACAATTGGCCATCGGCGATCGATCCTGTGGGAACAATGCTTCGTCCTCTC GAGAACACGTGGTCAATGGCCAGGCAAATCAGGCATGCAAACGCACGAAG CCCCCCTCCCTCATCCGACTCGCCGAACGCATCACGGCGATTCGCGCTTG GTGAATGCGAGCCTGGTCCGGCGTGCTCCGTCCCGGCTTTTTAGGGATGC GAGGTCTATGGTCTAACGACTACGGCGTGCACGATCAATGAGCAATGAGT ACACCCCCCCACCCTGATACACACCACCAAAGCTTCCCCATATTCTCCCC TCTATTGAGCGTGCTGGTGGGTTTCGGTAAGGTACGGAGGCGCGCGCTTA GGCGGGCTGTGCGCATCCCTTCCTCTTGCGTGTTGCTCAGATTGCTTACT TTGAGGAGTCGCGCGAGCCGTGATTGTTGATGACACCGGCCGTGTGGTTT GTTCCGTGTCCCCAGATAGGGCCAGCTCGAACCGTCCTCCGCTTCCCGCC CGTCACCCCTCACCCCTCACCCCACACCCACGCCCTCCCCCTCTCCTCCT ATTTCGGCCCGTACGCTCTTAAACGAAACAGTGCAACGGCCACAGAGGCA GCGATGTGTTCCCGTACGGTATCATCGAGGACCTGATGGCGCCGCACTTC ACCTTGTTCGACAAGACGGGGCCCAACACGTACAGCAACCGCGACCTTGT TCGCCTCTTCGACCCCAGCGTGAACGCCCTCAACTACATTTACGACAACT TCGAGTGGCCGCACTGCGCAGCGCAGGGCTACGACATGAACAACCTGTAC GCCGATGAGGCGACGCGGGAGAGCGCGAAGGAGCGCTCTAGGGACCTCGA CTTCGGGCTGTTCCCCCAGGGGGAGCGCCGCGGGCAGCTGTACGGCGAGC GATCGTTGCGCGAACTAGCCAAGCAGTTGAAAAAGGGGAAGGAGTAGGGA GGGAGGAACTCCGGCTTCGTACGTGGTTTTTGACCCTTCCCCCGCCCTCT CTGCCTTGGTCTCCTGATCTTTCTCTCGTGTCGCCGGGGCGTTTTGTTTT TTTCCGCTCCCCTCGTTTTTTTCAACCTCGCGTGGATTGCGGCGGCGATG AGCCCTCCCTCTTCCGATCATAGCGGCGGCGGTGGAATACTAGCACCTGG AAGTTCGAGCACCGGTGGTTAGGTTAAACTTCGCCCGGCCGTAAGCAGTC GCTGTCGGTCGCGGGAATGGTTGAGTGGGTTTCTCCCGCGCAGGGGTCCT CTTTTTTGTGTCCTCCGACCTTATGCTGCCGCGATCGCAGTCTGGGAGGC GAGTGCTGAGATGCGCGCGCGCTTGCCGGG
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig8986:1487..8816+

>mRNA_S-dermatodea_contig8986.17066.1 ID=mRNA_S-dermatodea_contig8986.17066.1|Name=mRNA_S-dermatodea_contig8986.17066.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2304bp|location=Sequence derived from alignment at S-dermatodea_contig8986:1487..8816+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCTGTCCCCAAGGTTGACCCCGACCAGGCGGACCTCCTCGGCGCCGA
CGTTTTCGGGCGGATGCGCTCCCCCTGGAACGTGAACGACCGCGAGTACC
TAACCCGCGGTTGCGGCGAGATGTGCGGCATCCCCAGCACCACATTCTAT
GGCTGTCCCCAAGGTTGACCCCGACCAGGCGGACCTCCTCGGCGCCGACG
TTTTCGGGCGGATGCGCTCCCCCTGGAACGTGAACGACCGCGAGTACCTA
ACCCGCGGTTGCGGCGAGATGTGCGGCATCCCCAGCACCACATTCTACGA
GTGGCCCACTTGCCAAACTCACTACGAGCTACAGGAGCTACTGTCATCGT
ACTACGGCTACACCTGGCACTCCCAGTACGGTCCCCACGGGCCTGTGCAC
GTGTGGATCGGCGGCAACATCGACTGCAAGACGAGTGGCCCACTTGCCAA
ACTCACTACGAGCTACAGGAGCTACTGTCATCGTACTACGGCTACACCTG
GCACTCCCAGTACGGTCCCCACGGGCCTGTGCACGTGTGGATCGGCGGCA
ACATCGACTGCAAGAAAGACATGCAGATCGTGGAGTCCATCATCGGGCCG
GAGTACATGTCGCTCATCATCGGCTACTCGTTCATCTACCGCAAGGGTCT
GTTCCGCGACGGGCTGTTCAAGTGCGAGGGCAGGGCAGAGGAGGGCACTA
CCGCTGAGGAGGTCATGCAGCAGGGCATGTGCGGCTGTCTCGACCTGGAT
ATGGAAAAGAAAGACATGCAGATCGTGGAGTCCATCATCGGGCCGGAGTA
CATGTCGCTCATCATCGGCTACTCGTTCATCTACCGCAAGGGTCTGTTCC
GCGACGGGCTGTTCAAGTGCGAGGGCAGGGCAGAGGAGGGCACTACCGCT
GAGGAGGTCATGCAGCAGGGCATGTGCGGCTGTCTCGACCTGGATATGGA
AAAGGAGGAGGACTGGAAGGCGATCTACGACTTGTTTTCGGCGAACTGGG
ACTTCGGCGAGCTGACAGACTCGCAGAAGCAGACTCTGGCGTTCCAGTAC
TGCAACGGCGTCATCGGCATCGGAGAGTCGTCCCAGTCCAGCTCTCCGCT
CGACCCGACCTTCTGGTCCCTACACCCTACAATGGAGCGCCTCCTTATGA
GGAGGACTGGAAGGCGATCTACGACTTGTTTTCGGCGAACTGGGACTTCG
GCGAGCTGACAGACTCGCAGAAGCAGACTCTGGCGTTCCAGTACTGCAAC
GGCGTCATCGGCATCGGAGAGTCGTCCCAGTCCAGCTCTCCGCTCGACCC
GACCTTCTGGTCCCTACACCCTACAATGGAGCGCCTCCTTATGTTCAAAA
TCAACACGGGAACGATGACTGATTTTTCCTGGCCCGACGAGGTCGGACTG
TTCACCGGAGACGACGGGACCGTGTATGACGTTATCATCTCCACCGAGTC
CGACACGGTTCAAAATCAACACGGGAACGATGACTGATTTTTCCTGGCCC
GACGAGGTCGGACTGTTCACCGGAGACGACGGGACCGTGTATGACGTTAT
CATCTCCACCGAGTCCGACACGTGCAACGGCCACAGAGGCAGCGATGTGT
TCCCGTACGGTATCATCGAGGACCTGATGGCGCCGCACTTCACCTTGTTC
GACAAGACGGGGCCCAACACGTACAGCAACCGCGACCTTGTTCGCCTCTT
CGACCCCAGCGTGAACGCCCTCAACTACATTTACGACAACTTCGAGTGGC
CGCACTGCGCAGCGCAGGGCTACGACATGAACAACCTGTACGCCGATGAG
GCGACGCGGGAGAGCGCGAAGGAGCGCTCTAGGGACCTCGACTTCGGGCT
GTTCCCCCAGGGGGAGCGCCGCGGGCAGCTGTACGGCGAGCGATCGTTGC
GCGAACTAGCCAAGCAGTTGAAAAAGGGGAAGGAGTAGTGCAACGGCCAC
AGAGGCAGCGATGTGTTCCCGTACGGTATCATCGAGGACCTGATGGCGCC
GCACTTCACCTTGTTCGACAAGACGGGGCCCAACACGTACAGCAACCGCG
ACCTTGTTCGCCTCTTCGACCCCAGCGTGAACGCCCTCAACTACATTTAC
GACAACTTCGAGTGGCCGCACTGCGCAGCGCAGGGCTACGACATGAACAA
CCTGTACGCCGATGAGGCGACGCGGGAGAGCGCGAAGGAGCGCTCTAGGG
ACCTCGACTTCGGGCTGTTCCCCCAGGGGGAGCGCCGCGGGCAGCTGTAC
GGCGAGCGATCGTTGCGCGAACTAGCCAAGCAGTTGAAAAAGGGGAAGGA
GTAG
back to top