prot_S-dermatodea_contig12790.1706.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12790.1706.1
Unique Nameprot_S-dermatodea_contig12790.1706.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length133
Homology
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.960e-14
Identity = 39/79 (49.37%), Postives = 47/79 (59.49%), Query Frame = 0
Query:    9 LLVLVAFAGVAVSQDETPSPLACDDEFIGDSYCDQYANNRAKCDYDGGDCCECTCVDQGKDLGCSSFDCLDPTAECFGD 87
            LL+ VA     V  D T S   C  +F  D  CD + NN A+C+YDGGDCC CTC +   D G S FDC+DP+AEC  D
Sbjct:   11 LLIAVAIVSTRVEADSTTSN-DCSPDFYRDGECDTH-NNNAECEYDGGDCCSCTCQNDTYDCGVSGFDCVDPSAECVDD 87          
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 5.260e-13
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 0
Query:   31 CDDEFIGDSYCDQYANNRAKCDYDGGDCCECTCVDQGKDL----GCSSFDCLDPTAECFGDT 88
            C  E++GD YCD Y NN   CDYDGGDCCECTC     D+     CS F C+DPTA CF ++
Sbjct:  273 CMIEYLGDGYCDTYNNNEI-CDYDGGDCCECTCGSDSTDVLVGSDCSDFVCIDPTASCFDES 333          
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 4.400e-12
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   30 ACDDEFIGDSYCDQYANNRAKCDYDGGDCCECTCVDQGKDLGCSSFDCLDPTAECFGDTPSPVTPAP 96
            AC   + GD +CD + N+ A C++DGGDCCEC CVD   D G   +DCLDPT+ C   + SP TP+P
Sbjct:  409 ACISSYTGDGWCDSFYNH-ADCEWDGGDCCECDCVDATYDCGVVGYDCLDPTSSC---SDSPGTPSP 471          
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 1.390e-11
Identity = 35/69 (50.72%), Postives = 42/69 (60.87%), Query Frame = 0
Query:   36 IGDSYCDQYANNRAKCDYDGGDCCECTCV-DQGKDLGCSSFDCLDPTAECFGDTPSPVTPAPLEEVVTE 103
             GD +C+ Y NN  +C YDGGDCCECTCV D   + GC+ F C+DPTA C  D    VT   LE  + E
Sbjct:   62 FGDGFCNDY-NNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDD--DDVTADALENCMME 127          
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: A0A6H5L262_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L262_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.130e-10
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 0
Query:   17 GVAVSQDETPSPLACDDEF-IGDSYCDQYANNRAKCDYDGGDCCECTCVDQGK-DLGCSSFDCLDPTAECFGD 87
            G   +   T +   C DE  +GD  CD+  N  A+C YDGGDCCECTCV +G+ + G   + C+DP AEC  D
Sbjct:   27 GATTTATNTGTSSVCFDESAVGDGNCDRDIN-FAECGYDGGDCCECTCVAEGEYECGAGGYACIDPAAECVND 98          
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 2.040e-10
Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 0
Query:   16 AGVAVSQDETPSPLACDDEFIGDSYCDQYANNRAKCDYDGGDCCECTCVDQGKDLGCSSFDCLDPTA----ECFGDTPS--PVTPAPLEEVVTESSAWSIAV 111
            +  A S++ + +   C   ++ D +CD   NN A+C++DGGDCCECTCVD   + G   F CLDP+A    +C G+TP+  P +    E  V E SA + A+
Sbjct: 1957 SAAAQSKNHSSTTSDCIGVYVTDGWCD-LENNNAECNWDGGDCCECTCVDSQYECGIQGFSCLDPSATDLYDC-GETPAATPCSAEAQEAWVVEDSAQAQAL 2056          
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 3.750e-10
Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   23 DETPSPLACDDEFIGDSYCDQYANNRAKCDYDGGDCCECTCVDQGKDLGCSS--FDCLDPTAECF 85
            +  P    C++ ++ D YCD  +NN   CDYDGGDCCEC+CVD G D  C S  F CLDP   CF
Sbjct:  143 ETAPENTTCEESWMNDGYCDS-SNNYPSCDYDGGDCCECSCVD-GHDYECGSNGFSCLDPA--CF 203          
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: A0A6H5K5D1_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D1_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 5.240e-10
Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 0
Query:   31 CDDEFIGDSYCDQYANNRAKCDYDGGDCCECTCVDQGKDLGCSSFDCLDPTAECF 85
            C   +I D +CD  +NN + CDYDGGDCC C C+D     G   F C+DPT+ C+
Sbjct:   30 CFTSYISDGFCDS-SNNISGCDYDGGDCCSCDCLDDTYQCGVVGFTCIDPTSSCY 83          
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 4.250e-9
Identity = 37/80 (46.25%), Postives = 42/80 (52.50%), Query Frame = 0
Query:   25 TPSPLACDD--------EFIGDSYCDQYANNRAKCDYDGGDCCECTCVDQGKDLGCSSF--DCLDPTAECFGDTPSPVTP 94
            TPSP A  D          IGD  CD Y NN  +CD+DGGDCC CTC        CSS+  DC DP A C   +P+P  P
Sbjct:  212 TPSPAAGTDWPECEGYIYMIGDGSCDYY-NNNEECDWDGGDCCSCTCEGSSY-YSCSSYSMDCQDPNANCTTPSPTPYCP 289          
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Match: D7FSN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN8_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 9.740e-9
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   35 FIGDSYCDQYANNRAKCDYDGGDCCECTCVDQGKDLGCSSFDCLDPTAECFGD 87
            +I D +CD Y N   +CD+DGGDCCEC CVD     G + +DCL+P+A C GD
Sbjct:   65 YISDGWCDSYYNTE-ECDWDGGDCCECDCVDALYTCGVADYDCLNPSA-CGGD 115          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12790.1706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTT4_9PHAE7.960e-1449.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJK5_9PHAE5.260e-1354.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVP4_9PHAE4.400e-1250.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSR3_ECTSI1.390e-1150.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L262_9PHAE1.130e-1045.21LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FHG7_ECTSI2.040e-1039.22LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G5Y7_ECTSI3.750e-1050.77Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5K5D1_9PHAE5.240e-1047.27LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FX77_ECTSI4.250e-946.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSN8_ECTSI9.740e-952.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 19..59
e-value: 0.0086
score: 17.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..105
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.882

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12790contigS-dermatodea_contig12790:511..5076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12790.1706.1mRNA_S-dermatodea_contig12790.1706.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12790 420..6982 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12790.1706.1 ID=prot_S-dermatodea_contig12790.1706.1|Name=mRNA_S-dermatodea_contig12790.1706.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=133bp
MFRCLKVVLLVLVAFAGVAVSQDETPSPLACDDEFIGDSYCDQYANNRAK
CDYDGGDCCECTCVDQGKDLGCSSFDCLDPTAECFGDTPSPVTPAPLEEV
VTESSAWSIAVPSTAMVALLGACVGALSSRGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom