mRNA_S-dermatodea_contig87569.16904.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig87569.16904.1
Unique NamemRNA_S-dermatodea_contig87569.16904.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: D7FZ60_ECTSI (BiP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ60_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 6.930e-56
Identity = 103/147 (70.07%), Postives = 117/147 (79.59%), Query Frame = 1
Query:   31 GRASIQGVLARAEWVREDLETQGHLRALL---GPASREGSGER-------------PRCRRYSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIARTK 423
            G  + +GVLARAEWVR+DLE QGH+RALL   GPA  EG+ +R             PR R YSLR+TGHSLGGSTG LLAYMLR +YPSVRC++ISPLGGLLNSPHAE+CGEFVLS+ALG+DVVPRLSV  MERMRD+VL LIARTK
Sbjct:  191 GMYAHEGVLARAEWVRKDLEDQGHIRALLLGGGPAGEEGAPQRVASVAPGGGRRTPPRFRDYSLRVTGHSLGGSTGALLAYMLRWEYPSVRCVAISPLGGLLNSPHAENCGEFVLSSALGEDVVPRLSVLAMERMRDEVLELIARTK 337          
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: A0A6H5L7C8_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7C8_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.000e-55
Identity = 104/147 (70.75%), Postives = 118/147 (80.27%), Query Frame = 1
Query:   31 GRASIQGVLARAEWVREDLETQGHLRALL---GPASREGS----------GER---PRCRRYSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIARTK 423
            G  + QGVLARAEWVR+DLE QGH+RALL   GPA  EG+          G+R   PR R YSLR+TGHSLGGSTG LLAYMLR +YPSVRC+++SPLGGLLNSPHAE+CGEFVLS+ALG+DVVPRLSV  MERMRD+VL LIARTK
Sbjct:  511 GMYAHQGVLARAEWVRKDLEDQGHIRALLLGGGPAGEEGAPQKVASAAPGGDRRTPPRFRDYSLRVTGHSLGGSTGALLAYMLRWEYPSVRCLAVSPLGGLLNSPHAENCGEFVLSSALGEDVVPRLSVLAMERMRDEVLELIARTK 657          
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: B8BW96_THAPS (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW96_THAPS)

HSP 1 Score: 117 bits (293), Expect = 2.970e-28
Identity = 62/126 (49.21%), Postives = 79/126 (62.70%), Query Frame = 1
Query:   49 GVLARAEWVREDLETQGHLRALLGPASREGSGERPRCRRYSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIARTKV 426
            GVL   +W+  DL     L  LL        G+  +CR Y+LRI GHSLGG  GV+L+ MLR+ YP++RCI+ SP GGLL    A  C EFV +  L  D+VPRLS+  MER+RD+VL LI R K+
Sbjct:  224 GVLECTQWLHSDLMRNNILETLL-------MGDNAQCRGYALRIVGHSLGGGIGVILSLMLRQTYPNLRCIAYSPPGGLLTHDLATSCSEFVNTFILDSDIVPRLSLDNMERLRDEVLHLIPRVKL 342          
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: A0A7S1ZJB5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJB5_TRICV)

HSP 1 Score: 115 bits (287), Expect = 1.070e-27
Identity = 64/127 (50.39%), Postives = 78/127 (61.42%), Query Frame = 1
Query:   49 GVLARAEWVREDLETQGHL-RALLGPASREGSGERPRCRRYSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIARTKV 426
            GVL R+ WV  DL+  G L R LLGP +         C  YSLRI GHSLG +   +L++M+RR YPSVRC+  SP GG L+   A +C  F  S  L  D+VPRLSV  ME +RD+VL LI R KV
Sbjct:  110 GVLDRSRWVHSDLKRHGILERLLLGPDAE--------CPGYSLRIVGHSLGAAVASILSHMMRRTYPSVRCLCYSPPGGFLSWRLATECRHFTTSFVLDSDLVPRLSVDSMEHLRDEVLDLIGRIKV 228          
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: A0A7R9WI90_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WI90_9STRA)

HSP 1 Score: 109 bits (272), Expect = 5.090e-25
Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 1
Query:   49 GVLARAEWVREDLETQGHLRALLGPASREGSGERPRCRRYSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIARTKV 426
            GVL  + W+ +DL+  G L  LLGP ++  S        Y LR+ GHSLG     +L++MLRR YP++RC+  SP GG L+   A  C ++V S  L  D+VPRLSV  ME +RD+VL LI R KV
Sbjct:  329 GVLVCSRWIYQDLQRHGILDRLLGPNAQYPS--------YRLRVVGHSLGAGCAAILSFMLRRRYPTLRCLCYSPPGGFLSRNLAFGCKDYVTSFVLDSDLVPRLSVDNMENLRDEVLDLIGRIKV 446          
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: K0RXX4_THAOC (Lipase_3 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXX4_THAOC)

HSP 1 Score: 99.4 bits (246), Expect = 1.760e-21
Identity = 56/126 (44.44%), Postives = 75/126 (59.52%), Query Frame = 1
Query:   49 GVLARAEWVREDLETQGHLRALLGPASREGSGERPRCRRYSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIARTKV 426
            GV+    W+ EDL+    L  L+G        E P    Y+LR+ GHSLG   G +L+ MLR   PS+RC+  SP GGL+    A++C  FV S  L  D+VPRLS+  MER+RD+VL LI+R K+
Sbjct:  587 GVVECTMWLYEDLKNHRILETLMG--------EFP---SYTLRVVGHSLGAGIGFILSLMLRSTIPSLRCLCYSPPGGLVTWDLAKECSGFVNSFVLDSDIVPRLSLDNMERLRDEVLHLISRVKL 701          
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: A0A7S0AUV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AUV3_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 7.330e-20
Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 1
Query:  184 GHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIARTKV 426
            GHSLG +   LL++MLRR +P++RC+  SP GG +    AEDC +FV S  L  D+VPRLSV  ME +R++VL +I R KV
Sbjct:    2 GHSLGAACACLLSFMLRRQFPNLRCVCYSPPGGFITRKLAEDCKDFVSSFVLDSDLVPRLSVDSMEHLRNEVLEVIGRIKV 82          
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: A0A1Z5KQ66_FISSO (Sn1-specific diacylglycerol lipase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ66_FISSO)

HSP 1 Score: 92.8 bits (229), Expect = 3.370e-19
Identity = 56/127 (44.09%), Postives = 73/127 (57.48%), Query Frame = 1
Query:   49 GVLARAEWVREDLETQGHL-RALLGPASREGSGERPRCRRYSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIARTKV 426
            GV+     V  DLE    L R LLGP +            YSLRI GHSLG +TG LL+YMLR  YP++RC++ SP+G       A  C E+  S  +  D+VPRLS+  M+++RDD+L  I R KV
Sbjct:  502 GVMNCVRNVYRDLERHHLLERLLLGPNAAYPD--------YSLRIVGHSLGAATGTLLSYMLRHKYPNLRCLNYSPVGCAFTWDLATGCSEWCDSFFVDSDIVPRLSLESMDKLRDDMLEGIGRLKV 620          
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: A0A087YL25_POEFO (sn-1-specific diacylglycerol lipase n=3 Tax=Poecilia TaxID=8080 RepID=A0A087YL25_POEFO)

HSP 1 Score: 88.2 bits (217), Expect = 1.360e-17
Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1
Query:  166 YSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIA 414
            Y L +TGHSLG  T  LLA +LR  +P+++C S SP GGLL+ P AE   +FV+S  LG D+VPRLS+  ME ++  +L ++A
Sbjct:  419 YKLVVTGHSLGAGTAALLAILLRTSFPTLKCYSFSPPGGLLSQPLAEYSKDFVVSVVLGKDLVPRLSIPNMEDLKSRILKIVA 501          
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Match: A0A3B3UKY9_9TELE (sn-1-specific diacylglycerol lipase n=1 Tax=Poecilia latipinna TaxID=48699 RepID=A0A3B3UKY9_9TELE)

HSP 1 Score: 86.7 bits (213), Expect = 3.130e-17
Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 1
Query:  166 YSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPHAEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLI 411
            Y L +TGHSLG  T  LLA +LR  +P+++C S SP GGLL+ P AE   +FV+S  LG D+VPRLS+  ME ++  +L ++
Sbjct:  173 YKLVVTGHSLGAGTAALLAILLRTSFPTLKCYSFSPPGGLLSQPLAEYSKDFVVSVVLGKDLVPRLSIPNMEDLKSRILKIV 254          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87569.16904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ60_ECTSI6.930e-5670.07BiP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5L7C8_9PHAE2.000e-5570.75Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
B8BW96_THAPS2.970e-2849.21Lipase_3 domain-containing protein (Fragment) n=1 ... [more]
A0A7S1ZJB5_TRICV1.070e-2750.39Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7R9WI90_9STRA5.090e-2546.03Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
K0RXX4_THAOC1.760e-2144.44Lipase_3 domain-containing protein n=1 Tax=Thalass... [more]
A0A7S0AUV3_9STRA7.330e-2051.85Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A1Z5KQ66_FISSO3.370e-1944.09Sn1-specific diacylglycerol lipase n=2 Tax=Fistuli... [more]
A0A087YL25_POEFO1.360e-1749.40sn-1-specific diacylglycerol lipase n=3 Tax=Poecil... [more]
A0A3B3UKY9_9TELE3.130e-1748.78sn-1-specific diacylglycerol lipase n=1 Tax=Poecil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig87569contigS-dermatodea_contig87569:84..509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score117.5
Seed ortholog evalue5.2e-24
Seed eggNOG ortholog35128.Thaps261941
Preferred nameDAGLB
KEGG koko:K13806
KEGG Pathwayko04723,ko04745,ko04925,map04723,map04745,map04925
GOsGO:0001505,GO:0001676,GO:0003674,GO:0003824,GO:0004465,GO:0004806,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006638,GO:0006639,GO:0006690,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007186,GO:0007215,GO:0007216,GO:0007267,GO:0007275,GO:0007399,GO:0007405,GO:0007602,GO:0008150,GO:0008152,GO:0008283,GO:0009056,GO:0009058,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009987,GO:0016020,GO:0016042,GO:0016298,GO:0016787,GO:0016788,GO:0019369,GO:0019752,GO:0022008,GO:0023052,GO:0030154,GO:0030424,GO:0032501,GO:0032502,GO:0032787,GO:0033267,GO:0033559,GO:0038171,GO:0042133,GO:0042136,GO:0042995,GO:0043005,GO:0043196,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044304,GO:0044424,GO:0044425,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045202,GO:0045211,GO:0046339,GO:0046340,GO:0046461,GO:0046464,GO:0046486,GO:0046503,GO:0047372,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051606,GO:0051716,GO:0052689,GO:0061351,GO:0065007,GO:0065008,GO:0071704,GO:0071926,GO:0071944,GO:0072089,GO:0097060,GO:0097458,GO:0098590,GO:0098794,GO:0098917,GO:0098920,GO:0098921,GO:0099536,GO:0099537,GO:0099541,GO:0099542,GO:0120025,GO:0120038,GO:1901568,GO:1901575
EggNOG free text desc.Lipase (class 3)
EggNOG OGs2XB6H@2836,KOG2088@1,KOG2088@2759
COG Functional cat.IOT
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size426
Cds size426
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925364.7761183-CDS-S-dermatodea_contig87569:83..5091622925364.7761183-CDS-S-dermatodea_contig87569:83..509Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig87569 84..509 +
1694079883.6517637-CDS-S-dermatodea_contig87569:83..5091694079883.6517637-CDS-S-dermatodea_contig87569:83..509Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig87569 84..509 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig87569.16904.1prot_S-dermatodea_contig87569.16904.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig87569 84..509 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig87569.16904.1

>prot_S-dermatodea_contig87569.16904.1 ID=prot_S-dermatodea_contig87569.16904.1|Name=mRNA_S-dermatodea_contig87569.16904.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=142bp
PTPPPPCNCLGRASIQGVLARAEWVREDLETQGHLRALLGPASREGSGER
PRCRRYSLRITGHSLGGSTGVLLAYMLRRDYPSVRCISISPLGGLLNSPH
AEDCGEFVLSAALGDDVVPRLSVAGMERMRDDVLGLIARTKV
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mRNA from alignment at S-dermatodea_contig87569:84..509+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig87569.16904.1 ID=mRNA_S-dermatodea_contig87569.16904.1|Name=mRNA_S-dermatodea_contig87569.16904.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=426bp|location=Sequence derived from alignment at S-dermatodea_contig87569:84..509+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCCACCCCGCCCCCACCCTGCAATTGTCTGGGTCGTGCCTCCATTCAGGG CGTTCTCGCCCGGGCGGAGTGGGTACGGGAGGACCTCGAAACGCAGGGGC ATCTCCGCGCTCTCCTCGGCCCGGCGTCGCGCGAGGGTTCTGGGGAACGC CCACGCTGCCGCCGTTACTCTCTCCGCATCACGGGGCACTCGCTGGGGGG AAGCACGGGGGTCCTGCTCGCCTACATGCTTCGGAGGGATTACCCTTCCG TGCGGTGCATCTCTATCTCCCCGCTTGGCGGGCTGTTGAACTCCCCGCAC GCGGAGGATTGCGGGGAGTTCGTGCTGTCGGCGGCCCTCGGGGATGACGT CGTGCCGCGGCTGTCCGTCGCGGGCATGGAGCGCATGCGCGACGACGTCT TGGGCCTGATCGCGCGCACCAAGGTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig87569:84..509+

>mRNA_S-dermatodea_contig87569.16904.1 ID=mRNA_S-dermatodea_contig87569.16904.1|Name=mRNA_S-dermatodea_contig87569.16904.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at S-dermatodea_contig87569:84..509+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCCACCCCGCCCCCACCCTGCAATTGTCTGGGTCGTGCCTCCATTCAGGG
CGTTCTCGCCCGGGCGGAGTGGGTACGGGAGGACCTCGAAACGCAGGGGC
ATCTCCGCGCTCTCCTCGGCCCGGCGTCGCGCGAGGGTTCTGGGGAACGC
CCACGCTGCCGCCGTTACTCTCTCCGCATCACGGGGCACTCGCTGGGGGG
AAGCACGGGGGTCCTGCTCGCCTACATGCTTCGGAGGGATTACCCTTCCG
TGCGGTGCATCTCTATCTCCCCGCTTGGCGGGCTGTTGAACTCCCCGCAC
GCGGAGGATTGCGGGGAGTTCGTGCTGTCGGCGGCCCTCGGGGATGACGT
CGTGCCGCGGCTGTCCGTCGCGGGCATGGAGCGCATGCGCGACGACGTCT
TGGGCCTGATCGCGCGCACCAAGGTGCCCACCCCGCCCCCACCCTGCAAT
TGTCTGGGTCGTGCCTCCATTCAGGGCGTTCTCGCCCGGGCGGAGTGGGT
ACGGGAGGACCTCGAAACGCAGGGGCATCTCCGCGCTCTCCTCGGCCCGG
CGTCGCGCGAGGGTTCTGGGGAACGCCCACGCTGCCGCCGTTACTCTCTC
CGCATCACGGGGCACTCGCTGGGGGGAAGCACGGGGGTCCTGCTCGCCTA
CATGCTTCGGAGGGATTACCCTTCCGTGCGGTGCATCTCTATCTCCCCGC
TTGGCGGGCTGTTGAACTCCCCGCACGCGGAGGATTGCGGGGAGTTCGTG
CTGTCGGCGGCCCTCGGGGATGACGTCGTGCCGCGGCTGTCCGTCGCGGG
CATGGAGCGCATGCGCGACGACGTCTTGGGCCTGATCGCGCGCACCAAGG
TG
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