mRNA_S-dermatodea_contig87155.16862.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Match: A0A6H5KY43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY43_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 6.650e-17 Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 1 VYSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKPWGV 129
VYSQE FDRVTNTEGMRDLL RHFP+IA Q PKTQSAFKPWG
Sbjct: 577 VYSQEAFDRVTNTEGMRDLLERHFPDIARQVPKTQSAFKPWGA 619
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Match: A0A7S2HGQ8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGQ8_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 7.290e-8 Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 1
Query: 4 YSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKP 120
Y+Q G D V T G++DLL RH+P++A FPK SAFKP
Sbjct: 30 YTQWGLDHVEKTSGLKDLLARHYPDLAKPFPKNHSAFKP 68
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Match: A0A7S2HGR1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGR1_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 5.330e-7 Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 1
Query: 4 YSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKP 120
Y+Q G D V T G++DLL RH+P++A FPK SAFKP
Sbjct: 572 YTQWGLDHVEKTSGLKDLLARHYPDLAKPFPKNHSAFKP 610
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Match: A0A1H3FTA0_9RHOB (Catalase n=1 Tax=Ruegeria halocynthiae TaxID=985054 RepID=A0A1H3FTA0_9RHOB) HSP 1 Score: 49.7 bits (117), Expect = 1.230e-5 Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 1 VYSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKPWGVV 132
+Y+Q G D V GM+ LLLRHFPE A PK +AF PW VV
Sbjct: 896 IYTQLGMDWVAQN-GMKSLLLRHFPEFAPVLPKNATAFAPWEVV 938
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Match: UPI0014815B82 (catalase n=1 Tax=Ruegeria lacuscaerulensis TaxID=55218 RepID=UPI0014815B82) HSP 1 Score: 49.3 bits (116), Expect = 1.680e-5 Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 1 VYSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKPWGVV 132
+Y+Q G D V GM+ LLLRHFPE A PKT +AF PW V
Sbjct: 896 IYTQLGMDWVAQN-GMKSLLLRHFPEFAPVLPKTATAFAPWHKV 938
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Match: UPI0014893FF8 (catalase n=1 Tax=Ruegeria sp. HKCCD8929 TaxID=2683006 RepID=UPI0014893FF8) HSP 1 Score: 49.3 bits (116), Expect = 1.680e-5 Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 1
Query: 1 VYSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKPWGVVT 135
+Y+Q G D + GM+ LLLRHFPE A PK +AF PW +V+
Sbjct: 899 IYTQLGMDWIARN-GMKSLLLRHFPEFAPVLPKNATAFAPWSMVS 942
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Match: A0A848KDG0_9NOCA (Peroxidase n=1 Tax=Antrihabitans stalactiti TaxID=2584121 RepID=A0A848KDG0_9NOCA) HSP 1 Score: 47.4 bits (111), Expect = 8.040e-5 Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 1
Query: 1 VYSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKPWG 126
+Y++ GFD V NT M+D+LLRH+PE++ Q + F PWG
Sbjct: 532 IYTKVGFDWVNNTS-MKDVLLRHYPELSPQIKDVERIFAPWG 572
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Match: A0A074WUR2_9PEZI (Heme peroxidase n=1 Tax=Aureobasidium namibiae CBS 147.97 TaxID=1043004 RepID=A0A074WUR2_9PEZI) HSP 1 Score: 47.4 bits (111), Expect = 8.040e-5 Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 1 VYSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKPWGVV 132
+Y++EGF V NT GM+D+L RHFPE+A P+ + F PW V
Sbjct: 540 MYTKEGFAWVQNT-GMKDVLARHFPELAAVIPEKTNVFAPWVKV 582
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Match: A0A2V1BRT1_9HELO (Heme peroxidase n=3 Tax=Cadophora TaxID=210567 RepID=A0A2V1BRT1_9HELO) HSP 1 Score: 47.4 bits (111), Expect = 8.040e-5 Identity = 20/40 (50.00%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 4 YSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKPW 123
Y++EGF V NT GM+D+L+RHFPE+ + +++AF PW
Sbjct: 572 YTKEGFKWVQNT-GMKDVLIRHFPELKDTLKNSKNAFAPW 610 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87155.16862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig87155.16862.1 >prot_S-dermatodea_contig87155.16862.1 ID=prot_S-dermatodea_contig87155.16862.1|Name=mRNA_S-dermatodea_contig87155.16862.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=47bp VYSQEGFDRVTNTEGMRDLLLRHFPEIANQFPKTQSAFKPWGVVTS*back to top mRNA from alignment at S-dermatodea_contig87155:106..246+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig87155.16862.1 ID=mRNA_S-dermatodea_contig87155.16862.1|Name=mRNA_S-dermatodea_contig87155.16862.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=141bp|location=Sequence derived from alignment at S-dermatodea_contig87155:106..246+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig87155:106..246+ >mRNA_S-dermatodea_contig87155.16862.1 ID=mRNA_S-dermatodea_contig87155.16862.1|Name=mRNA_S-dermatodea_contig87155.16862.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=282bp|location=Sequence derived from alignment at S-dermatodea_contig87155:106..246+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |