prot_S-dermatodea_contig12758.1685.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12758.1685.1
Unique Nameprot_S-dermatodea_contig12758.1685.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length240
Homology
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: D8LE90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE90_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 9.370e-32
Identity = 106/253 (41.90%), Postives = 130/253 (51.38%), Query Frame = 0
Query:    1 LLLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMQLNAAAGRGED--PAVITAVAGLASRPGARNQEPPGIAARGRVMGHLAGASF-THGRAAHD-----ALRNVRPEDAKWDQSARFPSGDFLPC-DGVGTGIDSWTESRSVRVVQARTEGVSS-----WGEGYRNATI--FGTSNAPEGGGFATAREQ----TSPWQP-AGAAGSGGRRGSRWGVFASSTGTVDGAHKRGSAQQ 232
            L L C   Q FQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVM LNAAAG GED    +   V G   +  +R  +  G  +  R+       ++ T  RAA       A   +   ++ W +   F      P  D     + SW  S + ++     +GVSS     W +G  NA     G +      GF T+RE      + WQP A  AG GGR GSRWG FAS+  T     +RG  Q+
Sbjct:    9 LALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDLNNVLRNNVGGFGPQSQSRRHKQDGRNSSDRIGNQDGDRAYSTVDRAALQHTVGPAQPGLYGRNSSWARPDGFVPACVAPIGDEHDPAVGSWHVSGAEKM-----DGVSSGPQDLW-DGRSNAGYPRAGEATRHPSDGFGTSREHHPDVRASWQPGAEPAGGGGRSGSRWGAFASNRATEVLEGRRGPNQE 255          
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: A0A6H5KK09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK09_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 3.840e-16
Identity = 78/208 (37.50%), Postives = 98/208 (47.12%), Query Frame = 0
Query:   31 QSIVKVWGRGGHAKDVRGLVMQLNAAAGRGEDP--AVITAVAGLASRPGARNQEPPGIAARGRVMGHLAGASFTHGRAA--HDALRNVRP----EDAKWDQSARFPSGDFLPC-DGVGTGIDSWTESRSVRVVQARTEGVSSWGEGYRNATI----FGTSNAPEGGGFATAREQ----TSPWQP-AGAAGSGGRRGSRWGVFASSTGT 220
            QSIVKVWGRGGHAKDVRGLVM LNAAAG GEDP   V   V G   +  ++     G    GR+  H    +++ G  A     L   +P     +  W +   F      P  D     + SW  S     +   + G     +G  NA        TS+  +G  F T+RE      + WQP A  AG+GGR GSRWG FAS+  T
Sbjct:    4 QSIVKVWGRGGHAKDVRGLVMALNAAAGGGEDPNNVVCNNVGGSEPQSQSQPHTQDGQNPSGRIGNHDDDRAYSVGDRASLQHTLGQAQPGLYVRNGSWARPEGFVPASVAPIGDEHDPAVGSW-HSWGTEKMDGVSSGTQDLWDGDSNAGYPRAREATSHPSDG--FGTSREHHPNVRATWQPVAEPAGAGGRNGSRWGAFASNRAT 208          
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: A0A3B3T2R6_9TELE (Uncharacterized protein n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3T2R6_9TELE)

HSP 1 Score: 58.5 bits (140), Expect = 7.770e-8
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    2 LLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMQLNAAAG 58
            +L C   QTFQV+Q  KS KW C+MCGE QS++KV+G+G  A D R  V +LNA  G
Sbjct:    9 VLRCFSCQTFQVHQVKKSKKWNCKMCGEKQSLLKVYGQGSGA-DCRRHVQKLNALRG 64          
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: UPI000D72EB99 (uncharacterized protein LOC112561384 isoform X1 n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72EB99)

HSP 1 Score: 62.0 bits (149), Expect = 1.430e-7
Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    2 LLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMQLN 54
            +L C   QT+QV+Q  KS KWKC++CGE QS++KV+GRG   KD R  V +LN
Sbjct:    6 VLQCYSCQTYQVHQEAKSKKWKCKLCGEQQSVIKVFGRGS-GKDCRQHVQKLN 57          
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: UPI0015B2AA0F (MRN complex-interacting protein isoform X1 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B2AA0F)

HSP 1 Score: 60.1 bits (144), Expect = 2.710e-7
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    2 LLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMQLNAAAG 58
            +L C   QTFQV+Q  KS KW C+MCGE QS+VKV+GRG  A D R  V +LN+  G
Sbjct:    7 VLRCFSCQTFQVHQVKKSKKWSCKMCGEKQSLVKVYGRGSGA-DCRRHVQKLNSLRG 62          
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: A0A8C4N9D6_EPTBU (Uncharacterized protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N9D6_EPTBU)

HSP 1 Score: 60.1 bits (144), Expect = 3.270e-7
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    2 LLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMQLN 54
            +L C   +TFQV+Q  KS KW CRMCGE QSI+KV+G GG A D R    QLN
Sbjct:    7 VLRCFCCETFQVHQVKKSTKWTCRMCGEKQSIIKVFG-GGSAPDCRRHTQQLN 58          
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: A0A409V662_MYTGA (Uncharacterized protein (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A409V662_MYTGA)

HSP 1 Score: 56.2 bits (134), Expect = 5.660e-7
Identity = 29/53 (54.72%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    2 LLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMQLN 54
            +L C   QTFQV+Q  KS KW C++CGE QSI KV+GRG    D R  V +LN
Sbjct:    7 VLQCYKCQTFQVHQVKKSTKWNCKLCGENQSIKKVFGRGS-GYDCRQHVQKLN 58          
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: A0A210R046_MIZYE (UPF0544 protein C5orf45-like n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210R046_MIZYE)

HSP 1 Score: 60.5 bits (145), Expect = 5.970e-7
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    2 LLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMQLN 54
            +L C    TFQV+Q  K+ KW C+MCGE QS++KV+GRG  A D R  V +LN
Sbjct:    7 VLRCYQCSTFQVHQVKKAKKWSCKMCGEKQSVIKVFGRGAAAADCRHHVQKLN 59          
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: A0A2C9KGC7_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KGC7_BIOGL)

HSP 1 Score: 59.3 bits (142), Expect = 1.070e-6
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    2 LLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMQLNAAAGR 59
            +L C L QTFQV Q TK  KWKC++CGE QSI+KV+G+G  A + R  V +LN   G+
Sbjct:    6 VLRCALCQTFQVLQVTKVSKWKCKLCGEKQSIIKVYGQGTGA-ECRKHVQKLNTLRGQ 62          
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Match: A0A8C9R4G2_SCLFO (MRN complex interacting protein n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9R4G2_SCLFO)

HSP 1 Score: 58.9 bits (141), Expect = 1.450e-6
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    2 LLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMQLNAAAG 58
            +L C   QTFQV Q  KS KW C+MCGE QS++KV+G+G  A D R  V +LNA  G
Sbjct:    7 VLRCFSCQTFQVQQVKKSKKWSCKMCGEKQSLIKVYGQGSGA-DCRRHVQKLNALRG 62          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12758.1685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE90_ECTSI9.370e-3241.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK09_9PHAE3.840e-1637.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3B3T2R6_9TELE7.770e-854.39Uncharacterized protein n=1 Tax=Paramormyrops king... [more]
UPI000D72EB991.430e-754.72uncharacterized protein LOC112561384 isoform X1 n=... [more]
UPI0015B2AA0F2.710e-756.14MRN complex-interacting protein isoform X1 n=2 Tax... [more]
A0A8C4N9D6_EPTBU3.270e-758.49Uncharacterized protein n=1 Tax=Eptatretus burgeri... [more]
A0A409V662_MYTGA5.660e-754.72Uncharacterized protein (Fragment) n=1 Tax=Mytilus... [more]
A0A210R046_MIZYE5.970e-752.83UPF0544 protein C5orf45-like n=2 Tax=Mizuhopecten ... [more]
A0A2C9KGC7_BIOGL1.070e-653.45Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A8C9R4G2_SCLFO1.450e-654.39MRN complex interacting protein n=2 Tax=Scleropage... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032739MRN complex-interacting proteinPFAMPF15749MRNIPcoord: 3..62
e-value: 1.7E-18
score: 67.3
IPR032739MRN complex-interacting proteinPANTHERPTHR15863FAMILY NOT NAMEDcoord: 2..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12758contigS-dermatodea_contig12758:212..4149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12758.1685.1mRNA_S-dermatodea_contig12758.1685.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12758 212..4149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12758.1685.1 ID=prot_S-dermatodea_contig12758.1685.1|Name=mRNA_S-dermatodea_contig12758.1685.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=240bp
LLLSCVLPQTFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLV
MQLNAAAGRGEDPAVITAVAGLASRPGARNQEPPGIAARGRVMGHLAGAS
FTHGRAAHDALRNVRPEDAKWDQSARFPSGDFLPCDGVGTGIDSWTESRS
VRVVQARTEGVSSWGEGYRNATIFGTSNAPEGGGFATAREQTSPWQPAGA
AGSGGRRGSRWGVFASSTGTVDGAHKRGSAQQVSLRKVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032739MRNIP