mRNA_S-dermatodea_contig8561.16724.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: A0A6H5JMD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD9_9PHAE) HSP 1 Score: 235 bits (599), Expect = 3.150e-73 Identity = 120/158 (75.95%), Postives = 139/158 (87.97%), Query Frame = 1
Query: 172 QQQQLRM-HLQAD---AVAEAVCQATYILA---EASRGGAVVDQIPYVPGESVMDFDKIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSRKGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGGVLQRPASDYDELNQAAKAAKE 624
Q++QLRM H +A +V EA+ AT+ILA ++SRGGAVV+QIPYVPG+ V DFDKIVIGSAACL AYAWAAYEFGKRIVTQRACEVC+GSGLVSTSR GK+LRQP KCYACGGFLPW++W +FW++NMDVGNGGVLQRPA DYDELN+AA+AAKE
Sbjct: 45 QKRQLRMMHFEAADGASVIEAIDHATWILAVAADSSRGGAVVEQIPYVPGD-VADFDKIVIGSAACLAAYAWAAYEFGKRIVTQRACEVCKGSGLVSTSRSGKQLRQPKKCYACGGFLPWESWGKFWKTNMDVGNGGVLQRPARDYDELNEAARAAKE 201
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: D7G800_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G800_ECTSI) HSP 1 Score: 233 bits (594), Expect = 3.400e-73 Identity = 116/153 (75.82%), Postives = 134/153 (87.58%), Query Frame = 1
Query: 190 MHLQAD---AVAEAVCQATYILA---EASRGGAVVDQIPYVPGESVMDFDKIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSRKGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGGVLQRPASDYDELNQAAKAAKEDR 630
MH +A +V EA+ AT+ILA ++SRGGAVV+QIPYVPG+ V DFDKIVIGSAACL AYAWAAYEFGKRIVTQRACEVC+GSGLVSTSR GK+LRQP KCYACGGFLPW++W +FW++NMDVGNGGVLQRPA DYDELN+AA+AAK+ R
Sbjct: 2 MHFEAADGASVIEAMDHATWILAVAADSSRGGAVVEQIPYVPGD-VADFDKIVIGSAACLAAYAWAAYEFGKRIVTQRACEVCKGSGLVSTSRSGKQLRQPKKCYACGGFLPWESWGKFWKTNMDVGNGGVLQRPARDYDELNEAARAAKDGR 153
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: A0A835Z783_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z783_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.440e-46 Identity = 75/120 (62.50%), Postives = 92/120 (76.67%), Query Frame = 1
Query: 289 YVPGESVMDFDKIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSRKGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGGVLQRPASDYDELNQAAKAAKEDRAAGRED 648
YVP + V +F +IV GSAA + Y WA YEFG RIVTQRAC VC GSGLV+ SR G+KL QP KCYACGGFLPW++W RFW +N VGNGG+L+RPA+DYDELN A+ A+ +AA ++
Sbjct: 35 YVPPDQVDNFPQIVAGSAAGVLVYLWALYEFGSRIVTQRACAVCNGSGLVTVSRTGRKLMQPRKCYACGGFLPWESWSRFWVANKYVGNGGILRRPAADYDELNAKAREAQAKQAAADQE 154
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: I2CSA8_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSA8_NANGC) HSP 1 Score: 136 bits (342), Expect = 1.380e-35 Identity = 60/110 (54.55%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 319 DKIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSRKGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGGVLQRPASDYDELNQAAKAAKEDRAAGRED 648
+++ +G A + + WA +EF KRI Q+ C VC+GSGLV + GK L P KCYACGGFLPW W RFW SN+D+GNGGVLQRPA+DY+ L++AAK + R GR D
Sbjct: 42 EQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAKRRRAGREGGRAD 151
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: W7TBR1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBR1_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.030e-32 Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 319 DKIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSRKGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGGVLQRPASDYDELNQAAK 612
+++ +G A + + WA +EF KRI Q+ C VC+GSGLV + GK L P KCYACGGFLPW W RFW SN+D+GNGGVLQRPA+DY+ L++AAK
Sbjct: 140 EQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAK 237
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: A0A7S2V7K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7K2_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.130e-25 Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 1
Query: 322 KIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSRKGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGGVLQRPASDYDELNQAAKA 615
++ I + AC+ + WAAYEF R Q C VC+G+GLV + G L P KCYACGGF+P+ +W +F+ +N +GNGG+L+RPA +Y+EL+ AAKA
Sbjct: 91 ELWIANGACVLVFLWAAYEFWSRFDVQGRCGVCQGTGLVMETSTGIPLSNPRKCYACGGFVPFVSWRQFFFANTQIGNGGILRRPAKNYEELSAAAKA 188
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: A0A4D9CUP8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUP8_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.160e-22 Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 319 DKIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSRKGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGG 561
+++ +G A + + WA +EF KRI Q+ C VC+GSGLV + GK L P KCYACGGFLPW W RFW SN+D+GNGG
Sbjct: 140 EQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGG 220
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: A0A7R9TP18_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TP18_9VIRI) HSP 1 Score: 93.2 bits (230), Expect = 3.580e-19 Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 202 ADAVAEAVCQATYILAEASRGGA--VVDQIPYVPGESVMDFDKIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSRKGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGGVLQRP 576
A+ AEA I EA+ GG D + G + + ++V+G + +AWA+ EFGKRI+ QR CE C GSGLV KG LR+ ++C ACGGFLPW++W++F+ G GG L P
Sbjct: 1 AEDAAEAARATARIAEEAATGGGGGAFDAVLVDGGVTAL---QLVVGFVVGVFPFAWASVEFGKRILIQRRCEGCGGSGLVEIGSKG--LRRKVRCRACGGFLPWESWEKFFLGTGTPGTGGPLLVP 122
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: A4S5T7_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S5T7_OSTLU) HSP 1 Score: 93.6 bits (231), Expect = 4.790e-19 Identity = 51/120 (42.50%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 322 KIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSR-KGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGGVLQRP---ASDYDELNQAAKAAKEDRAAGRED*RIAFDQ 669
++ G A + +A AAYEFGKR++ QR C +C GSGLV R +G +L +KC ACGGFLPWQ+W+RF S + GNGGV++ P S + + +A A++E A D + D+
Sbjct: 64 QLWFGFIAGVSPFAIAAYEFGKRVLIQRRCALCAGSGLVEVERSRGARL---VKCTACGGFLPWQSWERFLSS--EAGNGGVVRAPKGQTSAFYSVEKATAASREMAARRARDGEASSDR 178
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Match: A0A1Y5IAS3_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IAS3_OSTTA) HSP 1 Score: 90.5 bits (223), Expect = 5.220e-18 Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 1
Query: 322 KIVIGSAACLGAYAWAAYEFGKRIVTQRACEVCEGSGLVSTSRKGKKLRQPIKCYACGGFLPWQNWDRFWQSNMDVGNGGVLQRPASDYDELNQAAKAAKEDRAAGRED*R 654
++ G A L +A AAYEFGKR++ Q+ C C G+GLV G+K +KC ACGGFLPW++W+RF S +VGNGGV++ P KA + R+D R
Sbjct: 65 QLWFGFIAGLSPFAIAAYEFGKRVLIQKRCARCAGAGLVVLGDDGRK----VKCPACGGFLPWESWERFLTS--EVGNGGVVRAPKGQTSAFYSVEKAVEASERMVRDDAR 169 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8561.16724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8561.16724.1 >prot_S-dermatodea_contig8561.16724.1 ID=prot_S-dermatodea_contig8561.16724.1|Name=mRNA_S-dermatodea_contig8561.16724.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=207bp MTNPARATLLFLLVASSCVSLSTSFVLAARLSMRRACRLRPRSYQEPQQQback to top mRNA from alignment at S-dermatodea_contig8561:6731..9180+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8561.16724.1 ID=mRNA_S-dermatodea_contig8561.16724.1|Name=mRNA_S-dermatodea_contig8561.16724.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2450bp|location=Sequence derived from alignment at S-dermatodea_contig8561:6731..9180+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8561:6731..9180+ >mRNA_S-dermatodea_contig8561.16724.1 ID=mRNA_S-dermatodea_contig8561.16724.1|Name=mRNA_S-dermatodea_contig8561.16724.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at S-dermatodea_contig8561:6731..9180+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |