prot_S-dermatodea_contig8554.16721.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8554.16721.1
Unique Nameprot_S-dermatodea_contig8554.16721.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length286
Homology
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BLAST of mRNA_S-dermatodea_contig8554.16721.1 vs. uniprot
Match: D8LE21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE21_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 6.420e-105
Identity = 183/274 (66.79%), Postives = 205/274 (74.82%), Query Frame = 0 
Query:   26 GMPEAAAGALESLLCLQLKLSYLSTKTPRELKEYTQSRDAGDGITRRTEAALLALLSSEHSFPCKGNPAA-----------------VLVLLAGHLEIDLSEKDPRAWGAVKEAFERAHPWAVRTECLLVEGCDDRITVPYTAGKTTNKYHCSPVPSPEVVSRSSCTSSSSSRRAFDSADAARQEFLLSWALQPDASWKHGGAEFAEEEEEEREAGMEKDIGFGTRMNNVRRRLLGVLGVDRKAAEAFLTPSGSDAEFLPTALACVRAHRLGHK 282
            G+PE AA  LESLLCLQL+LSYLST+TP+ L+EYT SRDAG GITRR EAALLA +SSE+SFP   N AA                 +L LLA HLE+DL++KDP AW AV+  FERAHPWAVRTECLLVEGCDDRITVPY AG+ TNKYHCSPVP+PEVVSRSSCTSSSSSRRAF SAD AR + LL+WAL      K G       ++  RE  +  D GF  RM++VRRRLL VLG+DRK  E FLTPSGSDAEFLPTALACVRA RLGHK
Sbjct:    3 GLPEEAASTLESLLCLQLRLSYLSTQTPKALREYTHSRDAG-GITRRAEAALLARISSEYSFPRALNSAAASXXXXXXXXXXXXXSAILPLLAEHLELDLAKKDPEAWKAVRAVFERAHPWAVRTECLLVEGCDDRITVPYEAGRITNKYHCSPVPTPEVVSRSSCTSSSSSRRAFGSADDARHDLLLTWAL------KKGVGRDQTRDDSTRE--LYDDGGFTNRMSDVRRRLLDVLGMDRKTVEVFLTPSGSDAEFLPTALACVRARRLGHK 267
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BLAST of mRNA_S-dermatodea_contig8554.16721.1 vs. uniprot
Match: A0A6H5JKQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ2_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.230e-63
Identity = 128/209 (61.24%), Postives = 147/209 (70.33%), Query Frame = 0 
Query:   64 DAGDGITRRTEAALLALLSSEHSFP------CKGNP-----------AAVLVLLAGHLEIDLSEKDPRAWGAVKEAFERAHPWAVRTECLLVEGCDDRITVPYTAGKTTNKYHCSPVPSPEVVSRSSCTSSSSSRRAFDSADAARQEFLLSWALQPDASWKHGGAEFAEEEEEEREAGMEKDIGFGTRMNNVRRRLLGVLGVDRKAAEA 255
            DAG GITRR EAALLA +SSE+SFP        G P           +A+L LLA HLE+DL++KDP AW AV+ AFERAHPWAVRTECLLVEGCDDRITVPY AG+ TNKYHCSPVP+PEVVSRSSCTSSSSSRRAF SAD AR + LL+WAL      K G       ++   E  +  D GF  RM++VRRRLL VLG+DR   E+
Sbjct:    3 DAG-GITRRAEAALLARISSEYSFPRVLNSATAGTPGAADAAADAASSAILPLLAEHLELDLAKKDPEAWKAVRAAFERAHPWAVRTECLLVEGCDDRITVPYEAGRVTNKYHCSPVPTPEVVSRSSCTSSSSSRRAFGSADDARHDLLLTWAL------KKGVGRDQTRDDSTHE--LYDDGGFTNRMSDVRRRLLDVLGMDRNTVES 202
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8554.16721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE21_ECTSI6.420e-10566.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKQ2_9PHAE1.230e-6361.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8554contigS-dermatodea_contig8554:642..7988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8554.16721.1mRNA_S-dermatodea_contig8554.16721.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8554 642..7988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8554.16721.1 ID=prot_S-dermatodea_contig8554.16721.1|Name=mRNA_S-dermatodea_contig8554.16721.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=286bp
TLARVKLCEELDRASLGEACKKATSGMPEAAAGALESLLCLQLKLSYLST
KTPRELKEYTQSRDAGDGITRRTEAALLALLSSEHSFPCKGNPAAVLVLL
AGHLEIDLSEKDPRAWGAVKEAFERAHPWAVRTECLLVEGCDDRITVPYT
AGKTTNKYHCSPVPSPEVVSRSSCTSSSSSRRAFDSADAARQEFLLSWAL
QPDASWKHGGAEFAEEEEEEREAGMEKDIGFGTRMNNVRRRLLGVLGVDR
KAAEAFLTPSGSDAEFLPTALACVRAHRLGHKVLP*
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