mRNA_S-dermatodea_contig8516.16685.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: D7FK47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK47_ECTSI) HSP 1 Score: 116 bits (290), Expect = 2.790e-30 Identity = 59/95 (62.11%), Postives = 71/95 (74.74%), Query Frame = 1
Query: 7 GSFEGASAVWLAEHLLLHPQSIMVCLDTWTGSPEFDDMDNIDMNTVEERFKKNVAAAPNGERVNAVKGDSMLSLAKLVADGATSTFDVIYVDGSH 291
GS+EG SA W+AEHLL H +S++VCLDTW G E ++ DM +VEERF N+ APNGERV A KGDS+ SLA LVA G TS+FDV+YVD SH
Sbjct: 69 GSWEGGSASWVAEHLLKHSESLLVCLDTWDGGQEMENT-GFDMVSVEERFHWNMGKAPNGERVVAFKGDSLESLAGLVASGLTSSFDVVYVDASH 162
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: D7FK29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK29_ECTSI) HSP 1 Score: 108 bits (271), Expect = 7.660e-27 Identity = 50/97 (51.55%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 1 QVGSFEGASAVWLAEHLLLHPQSIMVCLDTWTGSPEFDDMDNIDMNTVEERFKKNVAAAPNGERVNAVKGDSMLSLAKLVADGATSTFDVIYVDGSH 291
+ GS++G SA W+AEH+L HP+SI+VCLDTW GSP ++ +M +E+RF+ N+A PNG+RV A KG S+ SLA ++A G S FD +++DGSH
Sbjct: 91 ETGSWQGESASWIAEHILKHPESILVCLDTWNGSPPPENS-GYEMAAIEDRFRSNMARVPNGDRVVAFKGTSLESLANILASGLDSRFDAVFLDGSH 186
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: A0A6H5JQS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS8_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.640e-26 Identity = 50/97 (51.55%), Postives = 69/97 (71.13%), Query Frame = 1
Query: 1 QVGSFEGASAVWLAEHLLLHPQSIMVCLDTWTGSPEFDDMDNIDMNTVEERFKKNVAAAPNGERVNAVKGDSMLSLAKLVADGATSTFDVIYVDGSH 291
+ GS++G SA W+AEH+L HP+SI+VCLD W GSP ++ DM +E+RF+ N+A PNG+RV A KG S+ SLA ++A G S FD + +DGSH
Sbjct: 14 ETGSWQGESASWIAEHVLKHPESILVCLDKWNGSPPPENS-GYDMAAIEDRFRSNMARIPNGDRVVAFKGSSLESLANILASGLDSRFDAVLLDGSH 109
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: UPI001B826D53 (class I SAM-dependent methyltransferase n=1 Tax=Phenylobacterium sp. 20VBR1 TaxID=2803784 RepID=UPI001B826D53) HSP 1 Score: 76.3 bits (186), Expect = 9.540e-15 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 1 QVGSFEGASAVWLAEHLLLHPQSIM--VCLDTWTGSPEFDDMDNID--MNTVEERFKKNVAAA----PNGERVNAVKGDSMLSLAKLVADGATSTFDVIYVDGSH 291
++GSFEG S VW+ EH + Q + C+DTW G E I+ M VE RF N+ A P+ + +K S L+LAKL+A+G T FD++YVDGSH
Sbjct: 41 EIGSFEGRSTVWMIEHCTVAAQGDVEITCIDTWDGGIEHQKGGQIETSMPDVERRFNANIEIAQGKTPHKAEITRMKMYSNLALAKLIAEGKTEYFDLVYVDGSH 145
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: A0A1G5IZ77_9HYPH (Methyltransferase domain-containing protein n=1 Tax=Microvirga guangxiensis TaxID=549386 RepID=A0A1G5IZ77_9HYPH) HSP 1 Score: 73.9 bits (180), Expect = 6.030e-14 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 1 QVGSFEGASAVWLAEHLL-LHPQSIMVCLDTWTGSPEFDDMDNI--DMNTVEERFKKNVA----AAPNGERVNAVKGDSMLSLAKLVADGATSTFDVIYVDGSH 291
++GS+EGASA +L + L LHP + C+DTW G E + DM+ VE RF KN +APN + KG S LAK++A G S+FD++YVDGSH
Sbjct: 33 EIGSYEGASAYYLVQKLAPLHPLELH-CIDTWEGGIEHQEGGGAETDMSAVEARFLKNARTMAESAPNPVELVVHKGFSHAQLAKILASGHESSFDMVYVDGSH 135
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: A0A7S4KFR5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4KFR5_9EUKA) HSP 1 Score: 72.0 bits (175), Expect = 2.480e-13 Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 1 QVGSFEGASAVWLAEHLLLHPQSIMVCLDTWT------------GSPEFDDMDNIDMNTVEERFKKNVAAAPNGERVNAVKGDSMLSLAKLVADGATS-------TFDVIYVDGSHT 294
++G+FEG++ +WLAEHLL H S ++C+D W+ G+PE NT+ RF NVA PNG RV +G ++ +L ++A A FD+IYVD H+
Sbjct: 14 ELGAFEGSTTMWLAEHLLRHKDSWLLCVDLWSTASLAAVGQPIAGTPEL-------ANTLG-RFSANVARTPNGGRVRTFRGSTLAALGGMIAAAADGDQAAEGDAFDLIYVDAGHS 122
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: A0A3L7QJ61_9BACT (Class I SAM-dependent methyltransferase n=2 Tax=Bacteria TaxID=2 RepID=A0A3L7QJ61_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 2.130e-11 Identity = 36/97 (37.11%), Postives = 52/97 (53.61%), Query Frame = 1
Query: 1 QVGSFEGASAVWLAEHLLLHPQSIMVCLDTWTGSPEFDDMDNIDMNTVEERFKKNVAAAPNGERVNAVKGDSMLSLAKLVADGATSTFDVIYVDGSH 291
++GS EG SAVW+A+HLL HP + ++C+D W + E RF N+A +V +K DS L ++ G FD+IY+DGSH
Sbjct: 31 EIGSHEGRSAVWIAQHLLSHPSATLICIDPWPDAE------------AEHRFDANIAETGRAPQVRKLKTDSWRGL---LSQGPG--FDLIYIDGSH 110
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: A0A8J6VRA9_9CYAN (Class I SAM-dependent methyltransferase n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6VRA9_9CYAN) HSP 1 Score: 67.4 bits (163), Expect = 7.600e-11 Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 1 QVGSFEGASAVWLAEHLLLHPQSIMVCLDTWTGSPEFDDMDNIDMNTVEERFKKNVAAAPNGERVNAVKGDSMLSLAKLVADGATSTFDVIYVDGSH 291
++GS+EG S WL +H+L H + + C+DT+ GS E D + ++E RF N+A ++V G S L L ST+D++Y+DGSH
Sbjct: 447 EIGSWEGRSTCWLLDHILTHGSAQVTCIDTFQGSAEHSRFDADYVQSLESRFDANIAKTGVPQKVQKQIGQSQEKLRSL----PLSTYDLLYIDGSH 539
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: A0A1I5UK58_9PSED (Methyltransferase domain-containing protein n=3 Tax=Pseudomonas TaxID=286 RepID=A0A1I5UK58_9PSED) HSP 1 Score: 64.3 bits (155), Expect = 2.970e-10 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1 QVGSFEGASAVWLAEHLLLHPQSIMVCLDTWTGSPEFDD--MDNIDMNTVEERFKKNV--AAAPNGERVNAVKGDSM--LSLAKLVADGATSTFDVIYVDGSH 291
++GSFEG SA ++ E + + C+D+W G E +DM+ +E+ F N+ AA+ VN SM L+LAKLVA+G + FD+IYVDGSH
Sbjct: 39 EIGSFEGRSACYIIESVASQKDIELHCVDSWEGGIEHQPGGAAPMDMSVIEQNFLHNIELAASTVEHNVNLTLHKSMSDLALAKLVAEGWSGYFDMIYVDGSH 141
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Match: A0A0A2ANA5_PROMR (Uncharacterized protein n=1 Tax=Prochlorococcus marinus str. MIT 9314 TaxID=167548 RepID=A0A0A2ANA5_PROMR) HSP 1 Score: 61.2 bits (147), Expect = 3.710e-9 Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 1 QVGSFEGASAVWLAEHLLLHPQSIMV-CLDTWTGSPEFDDMDNIDMNTVEERFKKNVAAAPNGERVNAV----KGDSMLSLAKLVADGATSTFDVIYVDGSH 291
++GS+EGAS +L + L H + + +DTW G E ++ I+M VEERFKKN + A + + K S+ +L+ L+ + FD IY+DGSH
Sbjct: 33 EIGSYEGASTCYLIDTLSRHHDAFEINAIDTWDGGIEHKEI-KINMQLVEERFKKNTSLAIKKSKKSIELITHKAKSINALSNLITSKKSGYFDFIYIDGSH 133 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8516.16685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8516.16685.1 >prot_S-dermatodea_contig8516.16685.1 ID=prot_S-dermatodea_contig8516.16685.1|Name=mRNA_S-dermatodea_contig8516.16685.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=107bp QVGSFEGASAVWLAEHLLLHPQSIMVCLDTWTGSPEFDDMDNIDMNTVEEback to top mRNA from alignment at S-dermatodea_contig8516:4433..5197+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8516.16685.1 ID=mRNA_S-dermatodea_contig8516.16685.1|Name=mRNA_S-dermatodea_contig8516.16685.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=765bp|location=Sequence derived from alignment at S-dermatodea_contig8516:4433..5197+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8516:4433..5197+ >mRNA_S-dermatodea_contig8516.16685.1 ID=mRNA_S-dermatodea_contig8516.16685.1|Name=mRNA_S-dermatodea_contig8516.16685.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=642bp|location=Sequence derived from alignment at S-dermatodea_contig8516:4433..5197+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |