prot_S-dermatodea_contig8494.16663.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8494.16663.1
Unique Nameprot_S-dermatodea_contig8494.16663.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length131
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8494.16663.1 vs. uniprot
Match: D8LFG9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG9_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 3.100e-55
Identity = 95/111 (85.59%), Postives = 105/111 (94.59%), Query Frame = 0 
Query:    1 MKSLARVIPTVVAHQFKGMGKLVD--SDQVEEEIVAVVDELMHEVTADIPRAVDQIFEELGVDETGCISEDEWEGAWQDFPELLDMMSLRGLGKTAHWAAIVLDQVVANQQ 109
            MKSLARVIPTVVAH+ + MG+L+D  S+QV+EEIV+VVDELMHEVTA+IPRAV+QIFEELGV E GCISEDEWEGAWQ+FPELLDMMSLRGLGKTAHWAAIVLDQVVANQQ
Sbjct:  247 MKSLARVIPTVVAHELEDMGRLIDIDSEQVQEEIVSVVDELMHEVTAEIPRAVEQIFEELGVIEAGCISEDEWEGAWQNFPELLDMMSLRGLGKTAHWAAIVLDQVVANQQ 357
[Close]
BLAST of mRNA_S-dermatodea_contig8494.16663.1 vs. uniprot
Match: A0A6H5KIH8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIH8_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.490e-53
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0 
Query:    1 MKSLARVIPTVVAHQFKGMGKLVD--SDQVEEEIVAVVDELMHEVTADIPRAVDQIFEELGVDETGCISEDEWEGAWQDFPELLDMMSLRGLGKTAHWAAIVLDQVVANQQ 109
            MKSLARVIPTVVAH+ + MG+L+D  S+QV+EEIV+VVDELMHEVTA+IPRAV+QIFEELGV E GCISEDEWEGAWQ+FPELLDMMSLRGLGKTAHWAAIVLD+VVANQQ
Sbjct:  374 MKSLARVIPTVVAHELEDMGRLIDIDSEQVQEEIVSVVDELMHEVTAEIPRAVEQIFEELGVIEAGCISEDEWEGAWQNFPELLDMMSLRGLGKTAHWAAIVLDEVVANQQ 484
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8494.16663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFG9_ECTSI3.100e-5585.59EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KIH8_9PHAE1.490e-5384.68EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 15..108
e-value: 4.2E-6
score: 28.2
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 30..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8494contigS-dermatodea_contig8494:5466..7272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8494.16663.1mRNA_S-dermatodea_contig8494.16663.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8494 5438..7314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8494.16663.1 ID=prot_S-dermatodea_contig8494.16663.1|Name=mRNA_S-dermatodea_contig8494.16663.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=131bp
MKSLARVIPTVVAHQFKGMGKLVDSDQVEEEIVAVVDELMHEVTADIPRA
VDQIFEELGVDETGCISEDEWEGAWQDFPELLDMMSLRGLGKTAHWAAIV
LDQVVANQQEGAGGGDQSSASPGAGGDGVP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair