prot_S-dermatodea_contig8444.16617.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8444.16617.1
Unique Nameprot_S-dermatodea_contig8444.16617.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length338
Homology
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BLAST of mRNA_S-dermatodea_contig8444.16617.1 vs. uniprot
Match: D8LSX2_ECTSI (Similar to intersectin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX2_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 6.490e-106
Identity = 217/360 (60.28%), Postives = 243/360 (67.50%), Query Frame = 0 
Query:    1 MPPPG-FGRGGGFXXXXXXXXXFGRPGFGPGRW-GPRFGPGLGKSCLIGAIATGAAVAXXXXXXXXXXXXXXRAGYIYVVQS--AGE----PPRAVRAEEGSFIIMRTAVASYQQAAGGEVQFEVQVTMNDSYKYGILRRYSQFDQLRERVAPLLRAVTPPFPPKHGVRSATWGLGAADLEERRVMLQAWLLSLCTAASTNNPALRLPLYDFLETALYYPPEVTAT---PTXXXXXXXAASTVPYATATPYAEPVLGGGAAAYPPHAPA----------VPQSAKSVSDGWAIPMESREASDLKLAMFGPDASGRLAAGRVAEALREGTGAASEDLRTVWELSDIDKDGMLDRDE-VIKW 338
            MP PG FGRGGGF XXXX XXX            GP FGPG G   L+GA+ATGAA+A    XXXXXXXXXX AGYIYVVQ   +G+    PPRAVRA E  FIIMR A+ASY+   GGEV FEVQ+TMND YKYG+LRRYSQFDQLRERV+ ++R  TPPFPPK  +RS+T GLG ADLEERR MLQAWL SLCTAAS N PALR+PLYDFLETA+YYPPE   T   PT       A +T P AT      PV    A A PP A            +P    S   GWA+P ESR+ASDLK+AM GP A+G+L   + A ALR GTGA  EDLR VW LSDID+DGMLDRDE  + W
Sbjct:    1 MPGPGGFGRGGGFRXXXXFXXXXXXXXXXXXXXXGPLFGPGPGPLGLVGALATGAAIAAVVGXXXXXXXXXXXAGYIYVVQEPQSGQVGHAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQITMNDGYKYGVLRRYSQFDQLRERVSRVIRTTTPPFPPKSSIRSSTVGLGPADLEERRQMLQAWLQSLCTAASANTPALRVPLYDFLETAMYYPPEAPVTSSDPTAASAQHTAVAT-PAATTATTGVPVAAAYAEALPPAAGTKGVGVPSAGPLPPKPDSTGYGWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAW 359
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BLAST of mRNA_S-dermatodea_contig8444.16617.1 vs. uniprot
Match: A0A6H5JHJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ6_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 9.610e-44
Identity = 98/175 (56.00%), Postives = 108/175 (61.71%), Query Frame = 0 
Query:  178 MLQAWLLSLCTAASTNNPALRLPLYDFLETALYYPPEVTAT---PTXXXXXXXAASTVPYATATPYAEPVLGGGAAAYPPHAPAV----------PQSAKSVSDGWAIPMESREASDLKLAMFGPDASGRLAAGRVAEALREGTGAASEDLRTVWELSDIDKDGMLDRDE-VIKW 338
            MLQAWL SLCTAASTN PALR+PLYDFLETA YYPPE   T   PT       A +T P AT      PV    A A PP A             P    S  DGWA+P ESR+ASDLK+AM GP A+G+L   + A ALR GTGA  EDLR VW LSDID+DGMLDRDE  + W
Sbjct:    1 MLQAWLQSLCTAASTNTPALRVPLYDFLETASYYPPEAPVTSSDPTTASAQHTAVAT-PAATTATTGVPVAAAYAEALPPAAGTKGVGVSSAGPPPPKPDSAEDGWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAW 174
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BLAST of mRNA_S-dermatodea_contig8444.16617.1 vs. uniprot
Match: A0A6H5JJX9_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJX9_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 1.150e-40
Identity = 77/110 (70.00%), Postives = 85/110 (77.27%), Query Frame = 0 
Query:   72 AGYIYVVQS-----AGEPPRAVRAEEGSFIIMRTAVASYQQAAGGEVQFEVQVTMNDSYKYGILRRYSQFDQLRERVAPLLRAVTPPFPPKHGVRSATWGLGAADLEERR 176
            AGYIYVVQ         PPRAVRA E  FIIMR A+ASY+   GGEV FEVQVTMND YKYG+LRRYSQFDQLRERV+ ++R  TPPFPPK  +RS+T GLG ADLEERR
Sbjct:    9 AGYIYVVQEPQPGQVHAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQVTMNDGYKYGVLRRYSQFDQLRERVSRVIRTTTPPFPPKCSIRSSTVGLGPADLEERR 118
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8444.16617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSX2_ECTSI6.490e-10660.28Similar to intersectin 2 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JHJ6_9PHAE9.610e-4456.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJX9_9PHAE1.150e-4070.00PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 254..337
e-value: 2.5E-7
score: 32.1
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 96..210
e-value: 2.2E-13
score: 51.9
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 106..192
IPR000261EH domainPFAMPF12763EF-hand_4coord: 294..335
e-value: 1.2E-4
score: 22.0
IPR001683Phox homologous domainPFAMPF00787PXcoord: 112..206
e-value: 1.8E-6
score: 27.9
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 93..212
score: 11.163
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 323..335
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 310..338
score: 11.389
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 270..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8444contigS-dermatodea_contig8444:5063..9259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8444.16617.1mRNA_S-dermatodea_contig8444.16617.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8444 4794..9259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8444.16617.1 ID=prot_S-dermatodea_contig8444.16617.1|Name=mRNA_S-dermatodea_contig8444.16617.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=338bp
MPPPGFGRGGGFRGGGGFRGGFGRPGFGPGRWGPRFGPGLGKSCLIGAIA
TGAAVAAVVGPPPRRRHPPPRAGYIYVVQSAGEPPRAVRAEEGSFIIMRT
AVASYQQAAGGEVQFEVQVTMNDSYKYGILRRYSQFDQLRERVAPLLRAV
TPPFPPKHGVRSATWGLGAADLEERRVMLQAWLLSLCTAASTNNPALRLP
LYDFLETALYYPPEVTATPTTTTATSAAASTVPYATATPYAEPVLGGGAA
AYPPHAPAVPQSAKSVSDGWAIPMESREASDLKLAMFGPDASGRLAAGRV
AEALREGTGAASEDLRTVWELSDIDKDGMLDRDEVIKW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR000261EH_dom
IPR001683Phox
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair