prot_S-dermatodea_contig8432.16601.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8432.16601.1
Unique Nameprot_S-dermatodea_contig8432.16601.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length121
Homology
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BLAST of mRNA_S-dermatodea_contig8432.16601.1 vs. uniprot
Match: D8LBK3_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBK3_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 6.030e-41
Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0 
Query:   25 APV--RKVLERPAVRENVQFPNVVAYYEGAEDVPGDREKSILRVKNGQMVVVYKTDDPLWWLAKVGDEIGWIASHTLQEIDPQAPGRLQHQPAEDVNPR 121
            APV  RKVLERPA  +NV FPN V+Y+EGAED+PGD+EK +LR+K+GQMVVVYKTDDP WWL KVGD++GW+ SH LQE+DP+APGR QH P  D+NPR
Sbjct:  105 APVVPRKVLERPANGQNVAFPNKVSYFEGAEDLPGDKEKGMLRLKDGQMVVVYKTDDPHWWLGKVGDDVGWVPSHLLQEVDPKAPGRQQHVPPRDINPR 203
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8432.16601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBK3_ECTSI6.030e-4170.71SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.40coord: 45..120
e-value: 2.6E-7
score: 32.3
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 40..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8432contigS-dermatodea_contig8432:3365..8793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8432.16601.1mRNA_S-dermatodea_contig8432.16601.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8432 3365..8793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8432.16601.1 ID=prot_S-dermatodea_contig8432.16601.1|Name=mRNA_S-dermatodea_contig8432.16601.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=121bp
MSQLVGLPQAPGVVSSVGVAAQPPAPVRKVLERPAVRENVQFPNVVAYYE
GAEDVPGDREKSILRVKNGQMVVVYKTDDPLWWLAKVGDEIGWIASHTLQ
EIDPQAPGRLQHQPAEDVNPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036028SH3-like_dom_sf