mRNA_S-dermatodea_contig8415.16584.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8415.16584.1
Unique NamemRNA_S-dermatodea_contig8415.16584.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: D8LCP4_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP4_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 9.790e-117
Identity = 241/565 (42.65%), Postives = 328/565 (58.05%), Query Frame = 3
Query:  795 PAAELMVSAVVPTFALQAVALPMMNLELRPRDTAETSNASKDVRRKMSGGLCNKFYGADLSNVDRTAVLIPGVAKAPTS---SPPPLPCPRKVARDRRDEEPPKTERRGGGPISAETPTLTRTAYGEFLLDHSVELISEGG------RMVYRVKVVMANDQGRDLLALDGVAPVVKETPNHCSVRVEVGE-LVHVTHFPFPVQWKAVHIKFSRRQGFLLLTVPPLRAPIQIPFGLAGSNV-GEGGTSRALLSSWSMPPCVPLASLPKLDFKAEWAHHSVFGAISFSAAEQAAEKSDEGSDNTELYQGFLKLKKTLVWLATETCKLHN-ADNLLWTHPCVCFTD---DNKPALWVWVSDILLDSSNEALVLDCCLLLVDGTSDEASDKL---FALAMLTG-SPSFNFFEMERPELEVWKALLPVAVERARQTYAHGADCIYSEAGASSGTALCKCGKGQDLPQAFAKSMGPITPPGEAPLHSLFYRAALSPMYNPPGVLFSLAAGLLASKQTATSSPSGG--------CAKCGKAKAPMRCSRCRKVSYCSKDCQRLHWKGHKSAC 2408
            P AELMVSA+VP+FAL         L+LRPRD  E   A KDV R++ G     F+ A L N D+TAVLIPG          S     CP +VA   RD   P    R G  +S    T  R  +G+  +D +VEL+ + G      R+VYRV +VMAND+ R+ LA  G APV++   + CSV+V +GE L H    PFP++ + V  ++S+RQG+++ TVPP+R P+ +P    G ++ G G      + SWS  P VPL+SLP+LDF+AEWAH  V G  SF+ AE++  +     ++  +    L LK+ ++ + +  C  H  A    W HP +C T+   D++PALWVWV++ILLDS+NEAL+LDCC++L D     AS +L     L  + G      F +    E+ +W +LLP AVERARQTYAH ADCIYS  G S G  LC CG G+DLP  F +SM     PG  PLH+ F+RAALSP++              A ++ +T  P+ G        CA+CGK+  P++CSRCRKV+YCSK+CQR  WK HK +C
Sbjct:  185 PEAELMVSAMVPSFALMMAPPAFTELQLRPRDGIEMYRAPKDVLRRLGGYFNKHFFKATLGNADKTAVLIPGATGGILHGGVSTRRFSCPDRVACPDRDLLRPSP--RTGRCLSKAVDTH-RFMHGDAAIDQTVELVEQAGSNSGDARLVYRVTLVMANDEAREGLAAGG-APVLETLHDPCSVQVALGEGLSHAVSLPFPIERRRVQREYSKRQGYVIYTVPPIRLPLNLPLAWIGLDIKGVGRAVLPSMPSWS--PAVPLSSLPRLDFQAEWAHEKVMGGFSFTPAERSMREGLPTPNSEIIDPVILGLKEEILAIISTACDHHEEAHASSWKHPWMCITENRRDDEPALWVWVNEILLDSTNEALILDCCVMLADRMDSAASIQLGTALELEEIQGRGAGIRFSKAVSGEVALWGSLLPAAVERARQTYAHTADCIYSTPGYS-GRTLCSCGMGKDLPPGFVESMRSAKAPGLVPLHTCFHRAALSPLFP-------------AHEKLSTQFPASGTAADGSRKCAQCGKSGKPLQCSRCRKVAYCSKECQRRDWKSHKPSC 729          
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 9.860e-110
Identity = 234/552 (42.39%), Postives = 318/552 (57.61%), Query Frame = 3
Query:  795 PAAELMVSAVVPTFALQAVALPMMNLELRPRDTAETSNASKDVRRKMSGGLCNKFYGADLSNVDRTAVLIPGVAKAPT---SSPPPLPCPRKVARDRRDEEPPKTERRGGGPISAETPTLTRTAYGEFLLDHSVELISEGGR-----MVYRVKVVMANDQGRDLLALDGVAPVVKETPNHCSVRVEVGE-LVHVTHFPFPVQWK-AVHIKFSRRQGFLLLTVPPLRAPIQIPFGLAGSNVGEGGTSRALLSSWSMPPCVPLASLPKLDFKAEWAHHSVFGAISFSAAEQAAEKSDEGSDNTELYQGFLKLKKTLVWLATETCKLHNADNLLWTHPCVCFTDDNK---PALWVWVSDILLDSSNEALVLDCCLLLVDGTSDEASDKLFALAMLTGSPSFNFFEMERPELEVWKALLPVAVERARQTYAHGADCIYSEAGASSGTALCKCGKGQDLPQAFAKSMGPITPPG-EAPLHSLFYRAALSPMYNPPGVLFSLAAGLLASKQTATSSPSGGCAKCGKAKAPMRCSRCRKVSYCSKDCQRLHWKGHKSAC 2408
            P AELMVSA++PT AL      +  L+LRPR++ E  NA KD+++++ GG    FY A +S+ DR AVL PG A        SPPPL CP+       D+       +     ++E   L R  +G+  +D SVELI++ GR     + Y+V +VMAND  R  LA    AP V+ + + CS+RV++ E L H    PFPV  + A+ IKFS+ +G+L +T P L+ P+Q PF L   +  EG   RA+ S+   PPC PL+SLP+LDFKAEW H  V G  S + AE              +    L LK++ + +A+  C  H  +  +WTHP VC +D+++   PA+W+WV++ILLDSSNEAL+LDCC++ V    D  S +L     L   PSF   +    EL +W ALLPVAVERARQTYAH ADC Y+   + +  ALC CG+G+DL      S+      G   P+H   YRAA SP+Y PPG    +    +A+   A       CAKCG     ++C+RCRKVSYCSK+CQR HWK HK+AC
Sbjct:  825 PEAELMVSALLPTIALVLAVPSVTELQLRPRESIEVINAPKDIKKRL-GGDHKVFYKAGISDADRVAVLTPGEAGKSVMAAESPPPLACPQIGVACIPDQATSAYSAQLVRKSTSEAAALHRALHGDSAIDQSVELINQAGRGSDVLLAYKVTLVMANDHARARLAAAEGAPAVELSRDPCSIRVKLEEGLRHTARLPFPVAKRSAMKIKFSKSKGYLCVTAPLLKGPLQAPFSLTVYSNTEGAGHRAIPSTVFWPPCAPLSSLPRLDFKAEWIHRKVMGEFSLTHAEVLMRDEATTQKKGGVDPALLGLKESFMAIASMACTHHQDELPVWTHPWVCISDNHRFDQPAIWLWVNEILLDSSNEALILDCCVMPVARMDDPVSAQLRETIELQDGPSFVASKAYPGELALWTALLPVAVERARQTYAHTADCTYASP-SDAPLALCDCGRGKDLHSECMHSIELANAMGARVPVHPSVYRAAFSPLYAPPGTSSFVTVAKMAAASVAGPPK---CAKCGIGGKSLQCTRCRKVSYCSKECQRQHWKIHKAAC 1371          
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 3.490e-97
Identity = 235/594 (39.56%), Postives = 304/594 (51.18%), Query Frame = 3
Query:  786 SGRPAAELMVSAVVPTFALQAVALPMMNLELRPRDTAETSNASKDVRRKMSGGLCNKFYGADLSNVDRTAVLIPG------VAKAPTSSPPPLPCPRKVARDRRDEEPPKTERRGGGPISAETPTLTRTAYGEFLLDHSVELISEG-------GRMVYRVKVVMANDQGRDLLALDGVAPVVKETPNHCSVRVEVGE--LVHVTHFPFPVQWKAVHIKFSRRQGFLLLTVPPLRAPIQIPFGLAGSNVGEGGTSRALLSSWSMPPCVPLASLPKLDFKAEWAHHSVFGAISFSAAEQAAEKSDEGSDNTELYQGFLKLKKTLVWLATETCKLHNADNLLWTHPCVCFTD-DN--KPALWVWVSDILLDSSNEALVLDCCLLLVDGTSDEASDKLFALAMLTGSPSFNFF---EMERPELEVWKALLPVAVERARQTYAHGADCIYSEAGASSGTALCKCGKGQDLPQAFAKSMGPITPPGEAPLHSLFYRAALSPMYNPPGVLF------SLAAGLLASKQTATSSP--------------------------SGGCAKCGKAKAPMRCSRCRKVSYCSKDCQRLHWKGHKSAC 2408
            S  PAAELM+SA+VP+FA     L    + LRPRD+ E   A KDV  KM G L   F+ A+L++ DRTA+L PG       +   +S    L CP+    DR  E P  T         +E   L R   G+  +D SVELI  G        R VYR+K +M  D  R+  AL    P V E+ + C VRV +G+  L  V H PFPV   AV +KFSRRQGF+L TVPPL   + IP  L       GGT  + +  W  PPC PL+SLP+LDF AEW+   V G +SF+  E+AA       + T +    L LK++ + + +     H  +   W        D DN  +PA+W+WV+D+LLDSSNEALV+DCC+L V    D  S +L   A    S     F   +    E+++W +LLPVAVERAR++YAH  DC YS     S   LCKCG G+DLP AF +++      GE      FYRAALSP+Y P G+        S  A     K + T S                           S GC+ CGK  +   CSRC +V YCS+DCQR HW+ HK  C
Sbjct:  805 SDDPAAELMISALVPSFAFSLAPLSETEVRLRPRDSVEMMRAPKDVMNKMGGMLWKCFFKANLTDKDRTAILTPGGDDPFGESGGGSSIGVLLACPKTAVTDRLQEAPSST-----ASTKSEPALLHRIVDGKSTVDRSVELICNGPAGKTGDARFVYRIKFIMITDLARE--ALTSATPAVAESLDPCCVRVTLGKGLLTLVAHLPFPVNRNAVDMKFSRRQGFVLFTVPPLGGSLHIPSTLTACVADGGGTVPSNI--W-WPPCAPLSSLPRLDFNAEWSFDKVMGGMSFTHEEKAARNGVFKLNTTTVDAALLGLKESFLAIISTATTSHTENGRGWNRSWALVADPDNHSEPAIWIWVNDLLLDSSNEALVIDCCVLPVASVGDAISLQLQRSAQFGSSAQGGPFLTCKAYAGEIKLWLSLLPVAVERARESYAHAEDCTYSRTSHDSAPVLCKCGMGKDLPPAFVEALKSGNVNGE----KCFYRAALSPLYVPQGMDGVSPFPPSTTAPAPQQKNSTTQSSAXXXXXXXXXXTPQTKTNPRMTVASGSAGCSNCGKVGSLRPCSRCHQVRYCSRDCQRQHWRDHKRDC 1384          
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: A0A6H5JFV6_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV6_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 1.440e-93
Identity = 230/589 (39.05%), Postives = 310/589 (52.63%), Query Frame = 3
Query:  795 PAAELMVSAVVPTFALQAVALPMMNLELRPRDTAETSNASKDVRRKMSGGLCNKFYGADLSNVDRTAVLIPGVAKAPTS---SPPPLPCPRKVARDRRDEEPPKTERRGGGPISAETPTLTRTAYGEFLLDHSVELISEGG------RMVYRVKVVMANDQGRDLLALDGVAPVVKETPNHCSVRVEVGE-LVHVTHFPFPVQWKAVHIKFSRRQGFLLLTVPPLRAPIQIPFGLAGSNVGEGGTSRALLSS---WSMPPCVPLASLPKLDFKAEWAHHSVFGAISFSAAEQAAEKSDEGSDNTELYQGFLKLKKTLVWLATETCKLHN-ADNLLWTHPCVCFTD---DNKPALWVWVSDILLDSSNEALVLDCCLLLVDGTSDEASDKLFALAM----------------------------LTGSPSFN------FFEMERPELEVWKALLPVAVERARQTYAHGADCIYSEAGASSGTALCKCGKGQDLPQAFAKSMGPITPPGEAPLHSLFYRAALSPMYNPPGVLFSLAAGLLASKQTATSSPSGGCAKCGKAKAPMRCSRCRKVSYCSKDCQRLHWKGHKSAC 2408
            P AELMVSA+VP+FAL         L+LRPRD  E   A K V R++ G     F+ A L N D+TAVLIPG          S P   CP +VA   ++   P      G   + +T    R  +G+  +D +VEL+ + G      R+VYRV +VMAND+ R  LA  G APV++   +  SVRV +GE L H T  PFP++ + V +++S+RQG+++ TVPP+R P+  P    G ++   G  +A+L S   WS  P VPL+SLP+LDF+AEWAH                                   K+ ++ + +  C+ H+ A    W HP +C T+   D++PALWVWV++ILLDS+NEAL+LDCC++L D   D A+  L   A+                            L  + SF       F +     + +W +LLP AVERARQTYAH ADCIY   G S G  LC CG G+DLP  F +SM         PL + F+RAALSP++        L+    AS   A  S    CAKCGK+  P++CSRCR VSYCSK+CQR  WK HK +C
Sbjct:  602 PEAELMVSAMVPSFALMMAPPAFTELQLRPRDGIEVFQAPKSVIRRLGGYFKKHFFKATLDNADKTAVLIPGATGDILHGGVSRPRFSCPDRVACPDQNSSRPSPPMGRGLRKAVDT---HRFMHGDAAIDQAVELVQQAGSTSGDARLVYRVTLVMANDEARQCLAAGG-APVLETLHDPFSVRVALGEGLGHATGLPFPIEQRRVQMEYSKRQGYVIYTVPPVRQPLNFPLAWTGLDIE--GVGKAVLPSMPFWS--PAVPLSSLPRLDFQAEWAHQ----------------------------------KEEILAIISTACEHHDEAHASSWKHPWMCITENRRDDEPALWVWVNEILLDSTNEALILDCCVMLAD-RMDSAASILLGTALELDIIQGRGAHIRFPKVSIVLVVSAQHSLLSAASFCCDIHPVFVKAVSGGVALWGSLLPAAVERARQTYAHTADCIYPTPGYS-GRTLCSCGMGKDLPPGFVESMRSAK---LVPLQTCFHRAALSPLFP---AYEKLSTQFFASGTAADGSRK--CAKCGKSGKPLQCSRCRNVSYCSKECQRQDWKSHKPSC 1138          
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: D8LNQ7_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ7_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.770e-39
Identity = 100/211 (47.39%), Postives = 120/211 (56.87%), Query Frame = 3
Query: 1791 NKPALWVWVSDILLDSSNEALVLDCCLLLVDGTSDEASDKLFA---LAMLTGSPSFNFFEMERPELEVWKALLPVAVERARQTYAHGADCIYSEAGASSGTALCKCGKGQDLPQAFAKSMGPITPPGEA--PLHSLFYRAALSPMYNPPGVLFSLAAGLLASKQTATSSPSGGCAKCGKAKAPMRCSRCRKVSYCSKDCQRLHWKGHKSAC 2408
            ++ ALWVWV++ILLDSSNEALVLDCC++LVD     AS +L A   L  + G     F +    EL +W  LLPVAVERARQTYAH ADC +   GA    +LC CGK +DLP  F + M        A  PLHSLFYRAALSP+Y P          +L  K+                   +R +RCR+V YCSK CQR  WK HKS C
Sbjct:    2 DQRALWVWVNEILLDSSNEALVLDCCVMLVDRFGGAASTQLGAAIELDEIHGGAGVLFAKSYHGELGLWTTLLPVAVERARQTYAHAADCTH--VGAEPPLSLCGCGKAKDLPLPFVERMKKSVNAVGARLPLHSLFYRAALSPLYLP----LEKHPMMLNEKKAPKXXXXXXXXXXXXXXXXLRXARCRRVVYCSKKCQREDWKTHKSGC 206          
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: D8LNQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ6_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.660e-25
Identity = 76/171 (44.44%), Postives = 101/171 (59.06%), Query Frame = 3
Query: 1122 ISAETPTLTRTAYGEFLLDHSVELIS-----EGGRMVYRVKVVMANDQGRDLLALDGVAPVVKETPNHCSVRVEVG-ELVHVTHFPFPVQWKAVHIKFSRRQGFLLLTVPPLRAPIQIPF-GLAGSNVGEGGTSRALLSSWSMPPCVPLASLPKLDFKAEWAHHSVFGAIS 1613
            +  E   L  +   +F++DHS+ELI      EG  +VY+V + MA+D  RD+LA  G A V ++    CSV V++G    H THFPFPV+  A+++K S+RQG  + TVPP  +P QIP   LAG           L SS    PCVPLASLP+LDF+AEW H  V G +S
Sbjct:  557 LRQEQTVLHHSTRSDFVVDHSIELIRDVWMIEGSGLVYKVTLRMADDGARDVLAAGGAA-VDEKAGGLCSVCVKLGGRFGHFTHFPFPVKKSAINLKVSKRQGHAIFTVPPSGSPAQIPVTALAG-----------LPSSLFWSPCVPLASLPRLDFQAEWTHGQVMGGMS 715          
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: UPI00044174DD (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI00044174DD)

HSP 1 Score: 95.5 bits (236), Expect = 4.350e-16
Identity = 108/402 (26.87%), Postives = 170/402 (42.29%), Query Frame = 3
Query: 1266 ALDGVAPVVKETPNHCSVRVEVGELVHVTHFPFPVQWKAVHIKFSRRQGFLLLTVPPLRAPIQIPFGLAGSNVGEGGTSRALLSSWSMPPCVPLASLPKLDFKAE-----WAHHSVFGAISFSAAEQAAEKSDEGSDNTELYQGFLKLKKTLVWLATETCKLHNADNLLWTHPCVCFTDDNKPALWVWVSDILLDSSNEALVLDCCLLLVDGTSDEASDKLFALAMLTGSPSF--NFFEMERPELEVWKALLPVAVERARQTYAHGADCIYSEAGA------SSGTALCKCGKGQDLPQAFAKSMGPITPPGEAPLHSLFY---RAALSPMYNPPGV--LFSLAAGLLASKQTATSSPSGGCAKCGKAKAP--MRCSRCRKVSYCSKDCQRLHWK-GHKSAC 2408
            AL   A V  +  + C++ + VG       FP+PV    + ++ +R+  ++ + VPP  A       L G          A  +SWS+   + L  L  LD         W    +  A+  S  E+A+E S +         G  ++K T+     E C +      ++    +  ++     ++V+V  I +DS+   +V+D  +L V+   + A+  L A  + T  P          R E  +W+ +LP  VER R T+ HG +C Y  +G         G  +C CG+ + LP+                L +L     R A+SP+Y  P V  +  + AG L   Q A  +    C  C     P  + CSRC+KV YCS +CQR  WK GHK  C
Sbjct:  810 ALGNGAIVAAKQQSPCTMMISVGVSDFSIKFPYPVDGSKMRLRVARKSRYVEVVVPPCGA-------LGGGGYALNPFPVAGRTSWSVHQ-IALDRLTTLDVSNRKMLMPWLEQLL--AVQLSNRERASESSPKTEAVASEVLG--EVKTTINSFFAEYCGMKGPKRRVFA---IADSEVGNLYMFVFVDRIRIDSAAFTVVIDGAILPVN--RENAAGVLRAYGVFTRHPGSVTTRIHTSRAEEVMWRKMLPALVERCR-TWEHGPNCEYIASGRIPLSDEPGGPTICNCGRDRHLPKGLQSQDN---------LRALLRHATRVAISPLYAMPYVEPVSVMRAGAL---QDARGTRDDACIACQGPGKPRLLICSRCKKVRYCSPECQRKDWKAGHKLLC 1181          
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: A0A4Q4YFT7_9PEZI (MYND-type zinc finger protein samB n=1 Tax=Monosporascus sp. CRB-9-2 TaxID=2211643 RepID=A0A4Q4YFT7_9PEZI)

HSP 1 Score: 94.0 bits (232), Expect = 1.310e-15
Identity = 72/214 (33.64%), Postives = 107/214 (50.00%), Query Frame = 3
Query: 1809 VWVSDILLDSSNEALVLDCCLLLVDGTSDEASDKLFALAMLTGSPSFNFFEMERPELEVWKALLPVAVERARQTYAHGADCIYSEAGASSGTA------LCKCGKGQDLPQAFAKSMGPITPPGEAPLHSLFYRAALSPMYNPPGVLFSLAAGLLASKQTATSSPS---GGCAKCGKAKAP-----MRCSRCRKVSYCSKDCQRLHWKGHKSAC 2408
            ++VS++ +D ++ A+VLDC +L +     E   KL        S  F   +++  E+++WK +LP  VER R ++ HGADC Y+ AGA   T       LC CG G   P  F ++   +T       +++  RAA+SP +  P         L  +  TA+  P      CA CG  K       + C+RC+ V YCS++CQR HWK HK  C
Sbjct: 1014 IFVSNLRVDLASRAVVLDCAVLPLH---KELMPKLDQFLGALTSRRFTHIKVDDAEMQLWKHVLPAYVERCR-SWEHGADCEYARAGAVPLTVEDEEQFLCTCGNGL-FPPRFVEN---VTYWNAVSQYAV--RAAISPAFWAPFADDIYRPDLSGASPTASGPPGLALNRCANCGTDKGKEGVGLLSCARCKNVKYCSRECQRTHWKAHKPMC 1217          
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: A0A0D2AV21_9EURO (MYND-type zinc finger protein samB n=1 Tax=Exophiala spinifera TaxID=91928 RepID=A0A0D2AV21_9EURO)

HSP 1 Score: 93.6 bits (231), Expect = 1.720e-15
Identity = 110/401 (27.43%), Postives = 172/401 (42.89%), Query Frame = 3
Query: 1260 LLALDGVAPVVKETPNHCSVRVEVGELVHVTHFPFPVQWKAVHIKFSRRQGFLLLTVPPLRAPIQIPFGLAGSNVGEGGTSRALLSSWSMPPCVPLASLPKLDFK--AEWAHHSVFGAISFSAAEQAAEKSDEGSDNTELYQGF-----LKLKKTLVWLATETCKLHNADNLLWTHPCVCFTDDNKPALWVWVSDILLDSSNEALVLDCCLLLVDGTSDEASDKLFALAMLTGSPSFNFFEMERPELEVWKALLPVAVERARQTYAHGADCIYSE------AGASSGTALCKCGKGQDLPQAFAKSMGPITPPGEAPLHSLFYRAALSPMYNPPGVLFSLAAGLLASKQTATSSPSGGCAKCGKAKAP-----MRCSRCRKVSYCSKDCQRLHWKGHKSAC 2408
            +L   G       TP H +V +  G  + V  FP P+  K   IK +R+ G++ LT P + A     +    S +         +++W++P  + + SLP LD K   + A  +   ++ +SA+E++        +N  L         ++LK ++  L      L      ++   C     D    +  +VS + LD SN   VLD  +L +  T          L  LT S S       + EL  WK +LP  VER R T++H + C Y        +  +    LC CG+G  +P  F   +     P    +     RAA+SP ++    +F     L    Q A    +  C  CG+ +A      + C+RCRKV YCSK+CQR+ WK HK+ C
Sbjct:  844 VLQAGGQVSAASTTPFHFAVDIRPGCTIAVD-FPLPMLDKGFRIKVARKSGWVELTAPVVDAA---EWPSLRSFIYPVFLDSDRVTNWNLP-YLNIHSLPVLDEKKTTQLAWLTTHASMMWSASERSLR------NNPHLPASLGERTRVELKDSMFSLYMHYSGLQGRRARIFGVSC---PSDGGVHILFFVSSLRLDLSNRTAVLDTAVLPLHDTLMPRIRTF--LGALTTSGSLCQVRATKAELCAWKQVLPALVERCR-TWSHRSGCEYLAEQRVPLSVENGQPPLCSCGEGI-MPPGFITGV-----PEWDQVAKYAVRAAISPPFS--AAMFEGGCKLDMLNQEAEEHQAKACNSCGRDEAVNGSGLLSCARCRKVRYCSKECQRVDWKKHKANC 1219          
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Match: A0A165CP88_9APHY (MYND-type domain-containing protein n=2 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165CP88_9APHY)

HSP 1 Score: 93.2 bits (230), Expect = 2.200e-15
Identity = 107/396 (27.02%), Postives = 176/396 (44.44%), Query Frame = 3
Query: 1272 DGVAP-VVKETPNHCSVRVEVGELVHVTHFPFPVQWKAVHIKFSRRQGFLLLTVPPLRAPIQIPFGLAGSNVGEGGTSRALLSSWSMPPCVPLASLPKLDFKA----EWAHHSVFGAISFSAAEQAAEKSDEGSDNTELYQGFLKLKKTLVWLATETCKLHNADNLLWTHPCVCFTDD--NKPALWVWVSDILLDSSNEALVLDCCLLLVDGTSDEASDKLFALAMLTGSPSFNFFEMERPELEVWKALLPVAVERARQTYAHGADCIYSEAGA------SSGTALCKCGKGQDL-PQAFAKSMGPITPPGEAPLHSLFYRAALSPMYNPPGVLFSLAAGLLASKQTATSSPSGG-CAKC-GKAKAPM-RCSRCRKVSYCSKDCQRLHWKGHKSAC 2408
            +G  P +++ +P  C++R+ +G+ +    FPFPV      ++ +R   ++ + VPP  +P++ P G+   N      SR +L  +S+   + LA +P LD KA    +W +  +   +S  + E++  K  E  ++T +Y     +K +L  +   +  +                D+  N     ++VSD+  D     ++ D  +L +        +K FA  +  G    N   +   E+  WK LLPV VER R ++ HG +C Y   G            LC CG+GQD  P    K   P+ P           R ALSP++            +++  +T    P+   C  C GK K  +  C+ C KV YCS+DCQ+ HWK HK  C
Sbjct:  808 NGATPSIIQLSP--CTMRLGIGKGIQDVAFPFPVIGSQNKLRLARTSMYVEVVVPPY-SPLK-PDGMK-LNPWPVTVSRGILGLYSIHR-LNLARMPVLDIKAFKLDQWLNSHLGSQMS--SRERSLRKKHE--EDTLMY-----IKDSLHSIFVRSAGIQGGP----AGRLFALRDNATNNCDTVLFVSDLRYDLHCHTVICDAFVLPLTHDLLFTIEKSFAKLVHEGQ--MNNITVYGNEMAAWKQLLPVLVERCRLSWTHGTNCEYKSEGRIPRCEDMEKNPLCTCGQGQDTEPMKRNKLWSPVAP--------YVTRVALSPLF------------VVSYLETIGRDPAAHKCFVCRGKGKPKLLACTGCLKVRYCSRDCQKKHWKVHKLQC 1162          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8415.16584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCP4_ECTSI9.790e-11742.65MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNQ8_ECTSI9.860e-11042.39MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FXN8_ECTSI3.490e-9739.56MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JFV6_9PHAE1.440e-9339.05MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNQ7_ECTSI1.770e-3947.39MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNQ6_ECTSI1.660e-2544.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00044174DD4.350e-1626.87hypothetical protein n=1 Tax=Punctularia strigosoz... [more]
A0A4Q4YFT7_9PEZI1.310e-1533.64MYND-type zinc finger protein samB n=1 Tax=Monospo... [more]
A0A0D2AV21_9EURO1.720e-1527.43MYND-type zinc finger protein samB n=1 Tax=Exophia... [more]
A0A165CP88_9APHY2.200e-1527.02MYND-type domain-containing protein n=2 Tax=Laetip... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8415contigS-dermatodea_contig8415:1035..8746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score104.0
Seed ortholog evalue2.2e-19
Seed eggNOG ortholog80637.XP_007769634.1
EggNOG free text desc.Domain of unknown function (DUF4470)
EggNOG OGs228UR@155619,2BWBX@1,2SE9H@2759,39W4I@33154,3P092@4751,3V4H9@5204
COG Functional cat.S
Best tax levelAgaricomycetes
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, MYND-type
Ec32 orthologEc-08_006200.2
Exons6
Model size3466
Cds size1605
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8415.16584.1prot_S-dermatodea_contig8415.16584.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8415 4049..7694 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925341.4691784-UTR-S-dermatodea_contig8415:1034..11901622925341.4691784-UTR-S-dermatodea_contig8415:1034..1190Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8415 1035..1190 +
1694079867.948003-UTR-S-dermatodea_contig8415:1034..11901694079867.948003-UTR-S-dermatodea_contig8415:1034..1190Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8415 1035..1190 +
1622925341.479705-UTR-S-dermatodea_contig8415:2790..31051622925341.479705-UTR-S-dermatodea_contig8415:2790..3105Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8415 2791..3105 +
1694079867.961091-UTR-S-dermatodea_contig8415:2790..31051694079867.961091-UTR-S-dermatodea_contig8415:2790..3105Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8415 2791..3105 +
1622925341.4889226-UTR-S-dermatodea_contig8415:3710..40481622925341.4889226-UTR-S-dermatodea_contig8415:3710..4048Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8415 3711..4048 +
1694079867.9755788-UTR-S-dermatodea_contig8415:3710..40481694079867.9755788-UTR-S-dermatodea_contig8415:3710..4048Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8415 3711..4048 +
1622925341.5409749-UTR-S-dermatodea_contig8415:7694..87461622925341.5409749-UTR-S-dermatodea_contig8415:7694..8746Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8415 7695..8746 +
1694079868.043673-UTR-S-dermatodea_contig8415:7694..87461694079868.043673-UTR-S-dermatodea_contig8415:7694..8746Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8415 7695..8746 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925341.4993765-CDS-S-dermatodea_contig8415:4048..48341622925341.4993765-CDS-S-dermatodea_contig8415:4048..4834Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8415 4049..4834 +
1694079867.9930882-CDS-S-dermatodea_contig8415:4048..48341694079867.9930882-CDS-S-dermatodea_contig8415:4048..4834Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8415 4049..4834 +
1622925341.513628-CDS-S-dermatodea_contig8415:6180..62821622925341.513628-CDS-S-dermatodea_contig8415:6180..6282Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8415 6181..6282 +
1694079868.0084472-CDS-S-dermatodea_contig8415:6180..62821694079868.0084472-CDS-S-dermatodea_contig8415:6180..6282Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8415 6181..6282 +
1622925341.5247457-CDS-S-dermatodea_contig8415:6495..67591622925341.5247457-CDS-S-dermatodea_contig8415:6495..6759Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8415 6496..6759 +
1694079868.0237758-CDS-S-dermatodea_contig8415:6495..67591694079868.0237758-CDS-S-dermatodea_contig8415:6495..6759Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8415 6496..6759 +
1622925341.5329819-CDS-S-dermatodea_contig8415:7241..76941622925341.5329819-CDS-S-dermatodea_contig8415:7241..7694Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8415 7242..7694 +
1694079868.0337367-CDS-S-dermatodea_contig8415:7241..76941694079868.0337367-CDS-S-dermatodea_contig8415:7241..7694Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8415 7242..7694 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8415.16584.1

>prot_S-dermatodea_contig8415.16584.1 ID=prot_S-dermatodea_contig8415.16584.1|Name=mRNA_S-dermatodea_contig8415.16584.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=535bp
MVSAVVPTFALQAVALPMMNLELRPRDTAETSNASKDVRRKMSGGLCNKF
YGADLSNVDRTAVLIPGVAKAPTSSPPPLPCPRKVARDRRDEEPPKTERR
GGGPISAETPTLTRTAYGEFLLDHSVELISEGGRMVYRVKVVMANDQGRD
LLALDGVAPVVKETPNHCSVRVEVGELVHVTHFPFPVQWKAVHIKFSRRQ
GFLLLTVPPLRAPIQIPFGLAGSNVGEGGTSRALLSSWSMPPCVPLASLP
KLDFKAEWAHHSVFGAISFSAAEQAAEKSDEGSDNTELYQGFLKLKKTLV
WLATETCKLHNADNLLWTHPCVCFTDDNKPALWVWVSDILLDSSNEALVL
DCCLLLVDGTSDEASDKLFALAMLTGSPSFNFFEMERPELEVWKALLPVA
VERARQTYAHGADCIYSEAGASSGTALCKCGKGQDLPQAFAKSMGPITPP
GEAPLHSLFYRAALSPMYNPPGVLFSLAAGLLASKQTATSSPSGGCAKCG
KAKAPMRCSRCRKVSYCSKDCQRLHWKGHKSACA*
back to top

mRNA from alignment at S-dermatodea_contig8415:1035..8746+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8415.16584.1 ID=mRNA_S-dermatodea_contig8415.16584.1|Name=mRNA_S-dermatodea_contig8415.16584.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7712bp|location=Sequence derived from alignment at S-dermatodea_contig8415:1035..8746+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGGGTCGTACCCGTGTCCAGCATTGCGGCGGTGGTCGATCACATCGACAC AAACGCTGTCGTGCAGCACGCTGTGGATTCCGGAACGAAGACTGGGAAGG CGTGCCTTATGCGCCTTACGTGGAAGCACCCTGCGCACGCATTTGCCGGG ACCGGGGTGAGACTTTTTCCTCCCATGTATAAACAAACTCGCTGGCTGTT CGTTCGGTGACGTATCATACTGCAGTAGTAGCCACTCGATACTCGACGCA TTTTACGAGCCCCAGCAAAGAGCTATCCTCGGATGTGGCAAAGCCAGCTG CGAAGGCGGGAGATTGTAGTGCACTGTTCATGTGTAGCCGTTGTACTTCT TATACAACAGTGTCGAGTGTACTCTTTTGAGTGTACATGGTTGTACTGGT TTAAAAAATGCGGTATGTTTATAGGTGCAGTCAGTGATTGTAACGGATTC AAAAATACATGTGTAGGCTGTGTGTGTGACCTGATGATACCCCTGCCACA AATTACACTTGCACGTACACTTACACTTAGACTACACGTACACGTACAAT TCCACTTACACTACGCTAGACTATCCGCCTTTGGTGCACGTGTAATCCGT GTATTTTCCGATTGTACAACACCAGCGTATACAGTAGTGAATTATAGTTG TACCTGCTGGTTGTACATCATAACGGTTTCATAAACACGCGTGTATGCTA TAAATAGGCACACTCAGTGACTGCATTTACCGGACTCAAAATTACCCGTG TCGGATGTGTACCTGATTGTACCCCTGCCCCAAGTTACACGTACCTCTAC ACTATTAATATTAGAGTCACGCTACGGTATGGTAGCGGGGGTATATATTG GACCGCTCTGCTGGATGGACTGAGCCGCTTTTGAAAGCGATTGTCCATCT TGTCTTCCCCCATCCATGAAAAAATAGGCGAACGTTTTCTCCGGCGCACG TATATCCTTTTGCGGCGAATATCCATGTGGCCACCTCATCGTTTTGTTAT CGGTGGTTTTGGATCCTCTGTTTGACAAAATAGACGAACGTTTTCTCCGG CGCACGTATATCCTTTTGCGGCGAATATCCATGTGGCCACCTCATCATTT TGTTACCGGTGGTTTTGGATCCTCTGTTTTGATGTGATCCCCGTTCAACC GAATGTGTTCACCTTACCGTAGGATGCTTCCTTAGTGCACTATTTATATT ATCACTATTACGGGGGACCATAGTTAACAGGTCCAAATTTGCCACAAATC TCAACCTAGAAAAACCAAGATAGGCTGGAATTATCGAGATTTCAAGGTGG GTGTTCTTGTGTATGGCCATATATCGCGTCTTACTATTTTTTTATGGGAT TTTTTTCGGTTGTTTGGGTACGGTATTCATGGTCGGAATAGTTGGGTATT CACGGTCATGAGATTAGGCCCTCATTACTGTGTACCTCCGTTTATAGTTG ATAGCCACAGCTACACCAGTGAGGTGAACAATTATACTCTTTTGAGGTGT GCGTGGTCGCTCTTCACAAAATTATATATATATAGATGCTTCACTTATTC CTGTGGGATTCCGGCCTCGCAATTTCGTTCTCTAAAATCGCTTATAACAA GCGGTCAACGCGCAATTAATTAATGAAGCCAATCTCCGCCTTTTTGCAAA GCTGTACCAGGTATGATACAAAGCACCAATTCCAGTTGGGTGTTAATACT GTTCAACGTGCACCATCTCCCGTTCTTGCTGTGCGCTTCCGCACGGGCGT ACACAGACGATTTCGACCGCCGCGGACACTCGCGTGGACATCTCCCCCGG TGACTTCGCGAAGCTAACACTTCCTGTCTACAAGGAGATGTTCGAGTACA TGCTGCTCGTTCAGCAATCCGCGATGGGTGGCAAATTGGCCAAAGACACC TTCATGGCTGCCATGACGGCGCCCAAGCACTACACGCCGCTATCCTTCGC CAGGCTCTTGGCGGCGTCCGGGCGTCGCCTGCGTTTGTCGCCAAGGCACT TCAAGGCGGCTATCAATGCGACGGTCTGTCAGTCTGGCCTCATGATGGCC TCAAACTTCCAGCAAGAACAGGTCAGAAGCTCGCTCCCCCGCTTGGGTGT CGAATCTGGTGCGCGTTACAGCGAAATTTGGGAGGAGATTAGAGCTTCAA TAGATGCACCGTCAAGATAAGATGGTGGGTGATGCCTGTCCAGGGCTGTC ACTTTTCGGTGCGTCGACGGAGCCACCGTGGGGGTTGGCGTTTGGACGAC TCGTAGTATCCCTTTCGTCCCACAGCGATGTGCGCTTTATTTGTGTCTGT ATATGTGTCAAAGTTTGTGTAAATGCTCATGTATGTATTGTATGGTACAA AAAGTATGCTGCTTGTTTATGGACGTATCACATACGTGTATAGGAAGCCG ACGCTGTATATGAGATGAGGGCCAATTAGATATTCCGGTCCATCCCGGCG GCCTCGATACGTAGTCGGCGTGTTGTCAGTACACCCGTAGGTAATCTTGA GCGCATGCGGGTTTTCTCGTGGAGGGGTTACTCCGAGGTGAGGTGTATTG CGGCGTTCGTTTCTGTTTTGTTTCCTTCAACCATGCCCCATAATAATGCA CTGCTTGAGTAGCCTCATCACACGATTCGTGACGGTTCGTCTTTTTGTTT CCCGAACGTAACTGTACTCCTTGCAGATTGCGCTTTCCGAAGCGCTAGAC CTGGTGACATCCCCGAAGACGGTGAGGGTCGGGGGTCGAACTATCCCGAC AGACATACAGCGAGTGGTACTCCTGGTGCCACCCTCGGGTCTCAGCCTCA TGCGCGAGTTCCAGCTCCCAGAGGTGCTGCTGTCTATTTCATCGAACGAC AAGCTTTCTCCAGGCTTCGACAACCACTTTCTCAGCGTTCACATGGCGTA CGTCCGGGTGCGCCGAGGAAGCGACGAGGGCGTGGACGACCAAGGCGTCT GGTGGTCTTTGAATCGCCACCTATCGGTGCGGGACACTCGAGCGGAAGAC CTGCCGCGGAGCTCATGGTCTCGGCTGTTGTTCCTACGTTCGCGTTGCAG GCAGTGGCCCTCCCGATGATGAACCTGGAGCTGCGGCCACGGGACACCGC AGAGACAAGCAACGCGTCGAAAGACGTCAGGAGGAAGATGTCGGGGGGGC TATGCAACAAGTTCTACGGTGCCGATCTCTCCAACGTCGACAGAACGGCG GTTTTAATCCCCGGTGTAGCAAAGGCGCCCACCTCTTCACCACCGCCTCT CCCTTGCCCGCGTAAGGTCGCCAGGGACCGCCGAGATGAGGAGCCGCCTA AGACGGAACGTCGAGGTGGTGGGCCAATCTCGGCCGAGACGCCTACGTTA ACGCGTACCGCGTACGGCGAGTTCCTGCTCGACCACTCGGTCGAGCTTAT TAGCGAAGGCGGCCGGATGGTATACCGTGTCAAGGTGGTGATGGCCAACG ACCAAGGGAGGGACCTTCTTGCGTTAGACGGCGTCGCCCCAGTCGTGAAA GAGACACCAAACCATTGCTCTGTCCGTGTCGAGGTCGGAGAACTCGTGCA TGTTACCCACTTCCCGTTCCCCGTGCAGTGGAAGGCCGTACACATCAAGT TCAGCAGGCGACAAGGTTTCCTGCTGTTGACGGTTCCGCCGCTCCGAGCT CCCATTCAGATTCCGTTCGGACTCGCGGGGAGTAACGTCGGAGAGGGCGG GACGAGCAGGGCTTTGCTGTCGAGCTGGAGCATGCCGCCCTGCGTACCCC TGGCGTCCCTTCCGAAGTTGGACTTCAAGGCCGAGTGGGCGCACCATTCG GTGAGCAACAATTACCTGCAGGCAGCAGCACCCTAGCCATGCTGGCACTA TTAATAGGCCGAAATCAAGGATTGTCTTCTATGACCAATGATTCCCCGGG GGAATGGAAAATGGCTCTGTGGACTGAGAAATCACCACAAATGTTAGTAA TCCAAAGATACGAGGGGGTAAGAAAATCGGCTTTTGTCTTGTCACGCAGG AGGCAGGAGGCGTTTTTCCATTTTGCTGTTCTCGCTCCTGATTGGCCGGC CCATCTCAGATCCCGTTCCAAGTTGACCAGGTTCACCTATGAATGGTACA CTGCTAAACGGATTGAAATTGTACTATTACGGAGGTACAGAATAATCAGG AGCACAAATTTTGGCGAAAAGCGTGTTCGAGTCTTGCTTGTTTGGTTTAA CGTTGGCCCGACCACCTTGAAATGATTTCCTCGACGTTTCAGGCCGGAAT GTCGCAGCAGATGTTGTGTCAGAAGGCCCGATCACGCTGATTTCTGGTAT ATTAGGCTAGGCATTACTGTCTGCCACATTTGCCCCTTATCACTGCCTAC TCGAGGTGCCAGCGAGGCCACACACCCTAATTGGATCGCCCATGTGTCGT ACAGCCAAATAGGGTGTGTGGCCTCGCTGGCACCTCGAGTATAGAGACAC CGTCCAGATGTGTAAGGTGCGCCCCTTCTACTTCCCCTCTCCCCTTTGTA TTACGAAGGCATACCGTAACCAGGACCAACATATATCTGTATATCCCTTA AAGTACACCCTGCATAACAAATCAATCAATCTGGTCTTCTGGTGTTTTAC GTAGGTACAACATCGTGTATGTGCAATCTTCCAGCCTGAAATCTCATCAT AAAACCTTTAACAACATAATTACCAAGGTGTTCGGGTCGTTGTTGTAAAG CAAGCTTTGAACACGCCGTTGAGCCGAAATTCGATAATGATTTCTAATAT ACTACTGTTATATGATTATACCACTATTATTATACTACTATTACTGTGCC TCCGCAAAACGCTTTCGCGCTAAACGTCCCCGTACTGGGAAATTCGCAGG TCTTCGGCGCGATCTAGTTTTCGGCGGCCGAGCAGGCGTTACAACATGAT GGGTAATCTTCCAGCCTGACATGCCAACAAAAAACTTATATAGCCATATT GCAAGGTGTTCGAGCCGACGCTTATTAACAAACCCTGAACACGCCACTGA GCCAAAATGTTGTCCTGATAACTACACGATTCTACTACTATTACTATTTT ACTATTATTATTATTATTATTTATTATACTTCTCTTACTGTGTACCTCCG TAACAACGCTTTCGCACTGACCTTCCCCGTCCGGGACAATTTGCAGGTCT TCGGCGCGATCTCGTTTTCGGCGGCCGAGCAGGCCGCTGAAAAGAGCGAC GAAGGGAGTGACAACACCGAGCTTTATCAAGGTTTCCTGAAGCTCAAGGT GATCGCCTTACCTACCCATGGGCTCTTTTTTTCCGACAGTGAAGAGTCCG TGTTGCTTGTGTGTCGAGTATTTACACATTGGCGCGTGCGCTGGACGTAT CGCGGGCTTTGTCTTGATGACACACACACACACACACACACAACAGTGTC ACATGACTTGAGCGCCTTTAATATTTTCCAAAATTCGTTTATTTTGTATC CACTCCGCCAGAAAACTCTCGTCTGGCTTGCCACCGAAACCTGCAAGCTA CACAACGCGGACAACCTGCTGTGGACGCATCCGTGCGTATGCTTCACGGA CGATAATAAGCCGGCCCTGTGGGTGTGGGTGAGCGATATCCTACTGGATT CCAGCAACGAGGCCTTGGTCCTCGACTGCTGTCTGCTGCTGGTCGACGGC ACGTCCGACGAGGCTTCCGACAAGCTCTTCGCTCTAGCCATGCTTACAGG ATCCCCGAGCTTCAACTTCTTCGAGGTATTTTACTGCCTGCGGACACTGT CTGATTTCAACTCCTCTTGTACAAGTAGCGTTTTTCTGTATCATCTGGTA TTAACAGTTCTTCTCTCTTGCGATAGTAAGTATAAGGGACGGTACGGTGT ATTGTAGAAGTACGGTTGTGATTAGTTATTTTTCTCCTTGACCCTTAGTG CATCTGACCACAAGTCGGGTCGGATTAAGCCGATCGGCTATACGTGTGCA AATCAGTAAAAAGCAGCTGTAAAGATGCAAAGAATTCACGCCCAATCCCA CGCGCAGAACCTCGTGCAGTTTCCACTCCATATCGTCAGACGATTTCCAC CGCGAGGGAAAGCCTTGCGCGTGTGACTAGGACATCGCATTATTTCAGAG GTGGTTATCATAGACTATCTGGGCGTCACACTATGCCAAAGTCAACTGGG CACCCGCTTCATGAATCCACGATTGCGATCCCCAATATCCCCATCGATAT GCTGCAGATGGAGCGACCGGAGCTAGAGGTGTGGAAAGCCTTGTTGCCTG TCGCCGTCGAGCGCGCCCGGCAGACGTACGCCCATGGGGCAGATTGCATC TACTCCGAGGCAGGAGCCTCTAGTGGCACCGCTCTCTGCAAGTGTGGCAA GGGGCAAGATCTTCCCCAAGCCTTCGCTAAGTCGATGGGACCCATCACAC CTCCGGGGGAAGCCCCTCTCCACTCTCTGTTCTACAGGGCGGCGCTGTCG CCGATGTACAACCCGCCGGGCGTGCTGTTCTCCCTAGCCGCCGGCCTGCT GGCCTCCAAGCAAACCGCCACCAGTAGCCCGTCAGGCGGGTGCGCAAAAT GCGGGAAGGCGAAAGCGCCGATGCGGTGCTCGCGCTGCCGCAAGGTGAGC TACTGCTCGAAGGACTGCCAACGTCTGCACTGGAAGGGCCACAAGTCTGC CTGTGCGTGACAAAGAAAAAAATCCCTCGCGACACCGAACCGAAGTACTC GGGGCAGCCACGGAATCGCCCGTGTTGCTGCGGCGTGCGTACCTGCCAAG CAGAATGCGGTGGATGCTTGATCTACCCACTGACGGTCGGCCAGACACGA GCGACATGTCTTGTGGCGGTTGGTACTGTCTGTAGCGCGTATTTCAGAAG GAGTTGTCACCCTATGGTGGGGGGGATACCTTTTGAGCCGCTCAGATGCA CGCTATGACACGCTTTTGGCAGCGTCTACATACAGCCAGATTTTCTCTAT AACTCAACGAGAGTTGTAAGAGCATTGTCCGGCATGGATACATTTTTGGA GCCGAACCTTAACCTTCATAGGGTATTATACTGTTGTTGTACCCAGATAC CGGATACCAAATTTGTATCGTGGTTTTGAAGCAGCATTACAATTAGAGGT GCGCCTCGTGTGCTAACCACATGTATGTGCGACCGCTACCACCGTGGTTG TGCCTTGAAGCCATTCGTACATTGTCGGCATTGGTCGTGAGGGACGCGTC GGAAAGTTTTTAGGCTACTCCGCAGCTTACCGCGAACGGCCGGTGCGTAA CAGCGACCGCGACTCGCCGCCGTACACTGGGTAGTATTTCTCGCGGTTTT CCCGCGAGTACGTTGTTGTAGGGGCAAGAGAGTCTGCAGATGATGATGTT CCGTACAACACGCAGCAGGCGTTTTTGTGGGGCTAGAATCGTTCCATGCA GTCTAGTGCGTGATTCCAGGCTGTCGATTGCTATTCTGTAGTAGTCACCA AGTGCTTTAGATGATAGGTAGCCTGGTGTTGAATATTCCGATCAAAGGAA GAACGGGGCTCAGTTACGGACAATCAAGCAATCAAGTCGGTCGACACGTT TGCGATGAATGAAAGCTACCGAGGAGATGCCACGGACGGTAGGTACTGAG GGTACGTTTTGGGCAGCTGGGATGCACGCTGACTCGCGTTTTGGAAGCGA CTGCTTTATCCGGCATGGATACACTTGGCCGCCGAACATTCATGGGGTAC CCGAACGATACC
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig8415:1035..8746+

>mRNA_S-dermatodea_contig8415.16584.1 ID=mRNA_S-dermatodea_contig8415.16584.1|Name=mRNA_S-dermatodea_contig8415.16584.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3210bp|location=Sequence derived from alignment at S-dermatodea_contig8415:1035..8746+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTCTCGGCTGTTGTTCCTACGTTCGCGTTGCAGGCAGTGGCCCTCCC
GATGATGAACCTGGAGCTGCGGCCACGGGACACCGCAGAGACAAGCAACG
CGTCGAAAGACGTCAGGAGGAAGATGTCGGGGGGGCTATGCAACAAGTTC
TACGGTGCCGATCTCTCCAACGTCGACAGAACGGCGGTTTTAATCCCCGG
TGTAGCAAAGGCGCCCACCTCTTCACCACCGCCTCTCCCTTGCCCGCGTA
AGGTCGCCAGGGACCGCCGAGATGAGGAGCCGCCTAAGACGGAACGTCGA
GGTGGTGGGCCAATCTCGGCCGAGACGCCTACGTTAACGCGTACCGCGTA
CGGCGAGTTCCTGCTCGACCACTCGGTCGAGCTTATTAGCGAAGGCGGCC
GGATGGTATACCGTGTCAAGGTGGTGATGGCCAACGACCAAGGGAGGGAC
CTTCTTGCGTTAGACGGCGTCGCCCCAGTCGTGAAAGAGACACCAAACCA
TTGCTCTGTCCGTGTCGAGGTCGGAGAACTCGTGCATGTTACCCACTTCC
CGTTCCCCGTGCAGTGGAAGGCCGTACACATCAAGTTCAGCAGGCGACAA
GGTTTCCTGCTGTTGACGGTTCCGCCGCTCCGAGCTCCCATTCAGATTCC
GTTCGGACTCGCGGGGAGTAACGTCGGAGAGGGCGGGACGAGCAGGGCTT
TGCTGTCGAGCTGGAGCATGCCGCCCTGCGTACCCCTGGCGTCCCTTCCG
AAGTTGGACTTCAAGGCCGAGTGGGCGCACCATTCGATGGTCTCGGCTGT
TGTTCCTACGTTCGCGTTGCAGGCAGTGGCCCTCCCGATGATGAACCTGG
AGCTGCGGCCACGGGACACCGCAGAGACAAGCAACGCGTCGAAAGACGTC
AGGAGGAAGATGTCGGGGGGGCTATGCAACAAGTTCTACGGTGCCGATCT
CTCCAACGTCGACAGAACGGCGGTTTTAATCCCCGGTGTAGCAAAGGCGC
CCACCTCTTCACCACCGCCTCTCCCTTGCCCGCGTAAGGTCGCCAGGGAC
CGCCGAGATGAGGAGCCGCCTAAGACGGAACGTCGAGGTGGTGGGCCAAT
CTCGGCCGAGACGCCTACGTTAACGCGTACCGCGTACGGCGAGTTCCTGC
TCGACCACTCGGTCGAGCTTATTAGCGAAGGCGGCCGGATGGTATACCGT
GTCAAGGTGGTGATGGCCAACGACCAAGGGAGGGACCTTCTTGCGTTAGA
CGGCGTCGCCCCAGTCGTGAAAGAGACACCAAACCATTGCTCTGTCCGTG
TCGAGGTCGGAGAACTCGTGCATGTTACCCACTTCCCGTTCCCCGTGCAG
TGGAAGGCCGTACACATCAAGTTCAGCAGGCGACAAGGTTTCCTGCTGTT
GACGGTTCCGCCGCTCCGAGCTCCCATTCAGATTCCGTTCGGACTCGCGG
GGAGTAACGTCGGAGAGGGCGGGACGAGCAGGGCTTTGCTGTCGAGCTGG
AGCATGCCGCCCTGCGTACCCCTGGCGTCCCTTCCGAAGTTGGACTTCAA
GGCCGAGTGGGCGCACCATTCGGTCTTCGGCGCGATCTCGTTTTCGGCGG
CCGAGCAGGCCGCTGAAAAGAGCGACGAAGGGAGTGACAACACCGAGCTT
TATCAAGGTTTCCTGAAGCTCAAGGTCTTCGGCGCGATCTCGTTTTCGGC
GGCCGAGCAGGCCGCTGAAAAGAGCGACGAAGGGAGTGACAACACCGAGC
TTTATCAAGGTTTCCTGAAGCTCAAGAAAACTCTCGTCTGGCTTGCCACC
GAAACCTGCAAGCTACACAACGCGGACAACCTGCTGTGGACGCATCCGTG
CGTATGCTTCACGGACGATAATAAGCCGGCCCTGTGGGTGTGGGTGAGCG
ATATCCTACTGGATTCCAGCAACGAGGCCTTGGTCCTCGACTGCTGTCTG
CTGCTGGTCGACGGCACGTCCGACGAGGCTTCCGACAAGCTCTTCGCTCT
AGCCATGCTTACAGGATCCCCGAGCTTCAACTTCTTCGAGAAAACTCTCG
TCTGGCTTGCCACCGAAACCTGCAAGCTACACAACGCGGACAACCTGCTG
TGGACGCATCCGTGCGTATGCTTCACGGACGATAATAAGCCGGCCCTGTG
GGTGTGGGTGAGCGATATCCTACTGGATTCCAGCAACGAGGCCTTGGTCC
TCGACTGCTGTCTGCTGCTGGTCGACGGCACGTCCGACGAGGCTTCCGAC
AAGCTCTTCGCTCTAGCCATGCTTACAGGATCCCCGAGCTTCAACTTCTT
CGAGATGGAGCGACCGGAGCTAGAGGTGTGGAAAGCCTTGTTGCCTGTCG
CCGTCGAGCGCGCCCGGCAGACGTACGCCCATGGGGCAGATTGCATCTAC
TCCGAGGCAGGAGCCTCTAGTGGCACCGCTCTCTGCAAGTGTGGCAAGGG
GCAAGATCTTCCCCAAGCCTTCGCTAAGTCGATGGGACCCATCACACCTC
CGGGGGAAGCCCCTCTCCACTCTCTGTTCTACAGGGCGGCGCTGTCGCCG
ATGTACAACCCGCCGGGCGTGCTGTTCTCCCTAGCCGCCGGCCTGCTGGC
CTCCAAGCAAACCGCCACCAGTAGCCCGTCAGGCGGGTGCGCAAAATGCG
GGAAGGCGAAAGCGCCGATGCGGTGCTCGCGCTGCCGCAAGGTGAGCTAC
TGCTCGAAGGACTGCCAACGTCTGCACTGGAAGGGCCACAAGTCTGCCTG
TGCGTGAATGGAGCGACCGGAGCTAGAGGTGTGGAAAGCCTTGTTGCCTG
TCGCCGTCGAGCGCGCCCGGCAGACGTACGCCCATGGGGCAGATTGCATC
TACTCCGAGGCAGGAGCCTCTAGTGGCACCGCTCTCTGCAAGTGTGGCAA
GGGGCAAGATCTTCCCCAAGCCTTCGCTAAGTCGATGGGACCCATCACAC
CTCCGGGGGAAGCCCCTCTCCACTCTCTGTTCTACAGGGCGGCGCTGTCG
CCGATGTACAACCCGCCGGGCGTGCTGTTCTCCCTAGCCGCCGGCCTGCT
GGCCTCCAAGCAAACCGCCACCAGTAGCCCGTCAGGCGGGTGCGCAAAAT
GCGGGAAGGCGAAAGCGCCGATGCGGTGCTCGCGCTGCCGCAAGGTGAGC
TACTGCTCGAAGGACTGCCAACGTCTGCACTGGAAGGGCCACAAGTCTGC
CTGTGCGTGA
back to top