mRNA_S-dermatodea_contig8363.16538.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: D8LU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU92_ECTSI) HSP 1 Score: 133 bits (334), Expect = 1.180e-34 Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 1
Query: 4 CADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGFRTKSVNMDFWALHEVARMTSMGNVKV 192
CADCDAELTDYGNIWASV+QGCFVCVHCLAVHRSLGFRTKSVNMDFWA+ EVARMTSMGNVKV
Sbjct: 9 CADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGFRTKSVNMDFWAVDEVARMTSMGNVKV 71
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A836CKZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ6_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.740e-13 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 4 CADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLG--FRTKSVNMDFWALHEVARMTSMGNVK 189
C DCDAELTD NIWASV+ GCFVCV+C VH L KSV MD W E+ + +MGNV+
Sbjct: 256 CCDCDAELTDLRNIWASVKIGCFVCVNCKQVHELLEPPLPCKSVYMDAWLDDELETVKAMGNVR 319
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: I0YZW3_COCSC (Arf GTPase activating protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZW3_COCSC) HSP 1 Score: 60.8 bits (146), Expect = 2.830e-10 Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 1
Query: 4 CADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGN 183
CADC+A G WASV GCF+C++C VHRSLG + +S +D W +VA SMGN
Sbjct: 31 CADCNAR----GPTWASVNLGCFICLNCSGVHRSLGVHCSKVRSTTLDTWLPEQVAFAQSMGN 89
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A1A0HCY0_9ASCO (Arf GTPase activating protein (Fragment) n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HCY0_9ASCO) HSP 1 Score: 54.7 bits (130), Expect = 7.010e-8 Identity = 27/66 (40.91%), Postives = 35/66 (53.03%), Query Frame = 1
Query: 1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVK 189
SC DC + WAS GCF+C+ C +HRS+G R KSV++D W +V M GN K
Sbjct: 30 SCVDCKSAQHPR---WASWNLGCFICIRCSGIHRSMGTHISRVKSVDLDVWTDEQVESMIKWGNEK 92
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A2P7YMF3_9ASCO (Arf-GAP domain-containing protein n=3 Tax=Metschnikowiaceae incertae sedis TaxID=2937349 RepID=A0A2P7YMF3_9ASCO) HSP 1 Score: 57.0 bits (136), Expect = 7.070e-8 Identity = 30/66 (45.45%), Postives = 36/66 (54.55%), Query Frame = 1
Query: 1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVK 189
SCADC T WAS GCFVC+ C +HRS+G R KSV++D W +V M GN K
Sbjct: 29 SCADCK---TAQHPRWASWNLGCFVCIRCSGIHRSMGTHISRVKSVDLDAWTDEQVELMLKWGNAK 91
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A0J8B0I0_BETVV (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B0I0_BETVV) HSP 1 Score: 54.7 bits (130), Expect = 7.290e-8 Identity = 26/67 (38.81%), Postives = 38/67 (56.72%), Query Frame = 1
Query: 1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVKV 192
+CADC+++ WAS+ GCF+C+ C +HRS+G + +SV +D W V M GN KV
Sbjct: 20 TCADCNSKQPR----WASINLGCFICIRCSGIHRSVGVHISKVRSVTLDEWQPAWVDNMEKWGNKKV 82
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: C5M592_CANTT (Uncharacterized protein n=1 Tax=Candida tropicalis (strain ATCC MYA-3404 / T1) TaxID=294747 RepID=C5M592_CANTT) HSP 1 Score: 56.2 bits (134), Expect = 1.210e-7 Identity = 28/66 (42.42%), Postives = 36/66 (54.55%), Query Frame = 1
Query: 1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVK 189
SCADC + WAS GCF+C+ C VHRS+G + KSV++D W +V M GN K
Sbjct: 34 SCADCKSSKNPR---WASWSLGCFICIRCSGVHRSMGTHISKVKSVDLDAWTDDQVENMVRWGNQK 96
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A0H5RBK5_9EUKA (Arf-GAP domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RBK5_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 1.330e-7 Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 1
Query: 4 CADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVKV 192
CADC + WAS+ GCF+C+ C +HRS+G + +SV +D W VA M + GN KV
Sbjct: 21 CADCSTKQPR----WASINIGCFICIRCSGIHRSIGVHISKVRSVTLDEWQPAWVANMENWGNKKV 82
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A5DYQ7_LODEL (Uncharacterized protein n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DYQ7_LODEL) HSP 1 Score: 56.2 bits (134), Expect = 1.330e-7 Identity = 27/66 (40.91%), Postives = 36/66 (54.55%), Query Frame = 1
Query: 1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVK 189
SCADC T WAS GCF+C+ C +HRS+G + KSV++D W ++ M GN K
Sbjct: 38 SCADCK---TTKNPRWASWNLGCFICIRCSGIHRSMGTHISKVKSVDLDAWTDEQIENMVKWGNEK 100
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A1Y2H0J7_9FUNG (Arf-GAP domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H0J7_9FUNG) HSP 1 Score: 53.5 bits (127), Expect = 1.540e-7 Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 1
Query: 46 WASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVKV 192
WAS GCF+C+ C VHRS+G + KSV++D W +V M GN KV
Sbjct: 43 WASFNIGCFMCIRCSGVHRSMGTHISKVKSVDLDSWTAEQVENMIKWGNGKV 94 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8363.16538.1 >prot_S-dermatodea_contig8363.16538.1 ID=prot_S-dermatodea_contig8363.16538.1|Name=mRNA_S-dermatodea_contig8363.16538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=66bp SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGFRTKSVNMDFWALback to top mRNA from alignment at S-dermatodea_contig8363:9028..9225+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8363.16538.1 ID=mRNA_S-dermatodea_contig8363.16538.1|Name=mRNA_S-dermatodea_contig8363.16538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=198bp|location=Sequence derived from alignment at S-dermatodea_contig8363:9028..9225+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8363:9028..9225+ >mRNA_S-dermatodea_contig8363.16538.1 ID=mRNA_S-dermatodea_contig8363.16538.1|Name=mRNA_S-dermatodea_contig8363.16538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at S-dermatodea_contig8363:9028..9225+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |