prot_S-dermatodea_contig8348.16528.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8348.16528.1
Unique Nameprot_S-dermatodea_contig8348.16528.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length46
Homology
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BLAST of mRNA_S-dermatodea_contig8348.16528.1 vs. uniprot
Match: A0A6H5JS12_9PHAE (EH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS12_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.200e-18
Identity = 37/42 (88.10%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:    1 MYLCRRQHLGEGVPSMLEAWMIPPRLRETRGCQDNSPSPAYP 42
            MYLCRRQ LGEGVPSMLEAWMIPP LRE RGC+DN PSPAYP
Sbjct:  379 MYLCRRQRLGEGVPSMLEAWMIPPSLREARGCRDNGPSPAYP 420
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8348.16528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JS12_9PHAE2.200e-1888.10EH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8348contigS-dermatodea_contig8348:4127..5645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8348.16528.1mRNA_S-dermatodea_contig8348.16528.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8348 4068..5780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8348.16528.1 ID=prot_S-dermatodea_contig8348.16528.1|Name=mRNA_S-dermatodea_contig8348.16528.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=46bp
MYLCRRQHLGEGVPSMLEAWMIPPRLRETRGCQDNSPSPAYPPRS*
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