mRNA_S-dermatodea_contig8346.16525.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: D8LL02_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL02_ECTSI) HSP 1 Score: 666 bits (1719), Expect = 8.790e-222 Identity = 477/918 (51.96%), Postives = 566/918 (61.66%), Query Frame = 1
Query: 421 KFTEGDRVSVYLPSGGKTHGIISRKSSRGRFDVTLTNGDVEKRVEPGDMSLSS--RQHRRNRTSE---HSIRSHRSSHSHRESEHCVSDDRRSES---QTGSDSPSRRP-----SSPPAAVARSSSSAES---RGKQQGDSIPVS-----PSSKASGASDSGGGDPARLPP-------DTAXXXXXXXXXVEVVVPVASESEPDTGD----AALKRASSSERSLSPLTSKVCHAQGLLKTMFWKRGDARSSRTDAARGLGGQNTRAGGADSTSRRDPTDSDHGDGTS---SGPASDNGGKEDEQVYSNPTVGGKGGEGLTEAGDRTRADNTAMAPVAAAEN----------GAAA-DGFVRRLSRGLSXXXXXSRKGEALSGASQSPA-SRSPSLATKLGMSLRGAIMGKTLLGVHKPHVEGRSTTRSPKSGSDGDDAGSEGTYSTGASTAGDRRXXXXXXXXXSAQRAHGLVGASIGRKSGDGDGGISSDGFDSEVFAPDSPLAATTYG-DPRNLPEAVHSYIGARERMEQEMSASGPVFLPRPANLASSP-RDGATP-WTRRRG-SVDITKQAPSTTQLSEQHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYCVLYAGACELRYYRSHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLVVLHKGDGRHPGLHIRPGHESRVSTTKTFKFNAADAQQRLLWVTVIEALMKKHGWGAYPDHRRSMRAPGHGGASADAA-GLHWG-TWGG-EAEKSAAGGETAPHTKSCGRSIVRDHACHRGCLKTLPLPDRKNATVPGEPDPGPRKGSVLTFVEGNDH---------IVRQNDTRDMLLIEGSTGGATR---RGISIPYSPRGRMGSLTTSALSPPVPTMGGARRQSSLKSD 2976
K GD+V VYLPSGGK G++S +SSR R+++TL NG+VEKRV +++L+S R HRRNR+ + S RS ++ R E R +S ++G + SR P +S A SSAE+ + K D PVS PS+ AS AS GGGDP + PP DTA VE +V SESE +T + ++L R S ER SPL+SKV AQGLLKTMFW++G+ + G GG ++ G S SRR G+ S SG + D+ G+ + S P G + R ++ N +P+ +E+ GAAA G RRLSRGL+ X S SPA SRSPSLATKLGM+LRGAIMGKT LGVH PH + +P + DAGS+ TYSTGAS+A +R S R L+ G GG+SSDGFDS++F DSP+AAT YG DPRNLP+AV+SYIGARE+ME EMSASGPVFLPR NLA+ +GA P W + RG S+DITKQA STTQ +EQHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRY VLYA ACELRYYR+H EAAWGRIPLGERGSIPLRLVVKIEQPSDKKY GCRFDLVVLHKG+ RHPGLHIRPG ESRV TTKTFKFNAADAQQRLLWVTVIEALMK+HGWG D RSMRAP HGG +A A L WG TWGG EAE T P K + D ++ + P R + G K SV+ FVE D +QND + ++ G+T A + RG+SIPYSP G+ GSLTT ALSPP+P GGARRQSSLKSD
Sbjct: 115 KIRTGDKVVVYLPSGGKAKGVVSVESSRDRYEITLENGEVEKRVHSRNIALASKHRSHRRNRSDQARSSSSRSQAKKNTRRRRESRADAPGREQSHGDESGLEPESRTPREQRSNSSWVLGATPPSSAEALVGQRKVGEDDQPVSLPSTGPSTVASAAS--GGGDPIQPPPVAESHSPDTAPTRRTSPPPVEALV---SESERETSNGERGSSLDRGSLHERGSSPLSSKVRQAQGLLKTMFWRKGEEQ--------GGGGGSSGTEGGRSASRRWS----RGNSLSRRFSGGSGDDPGENVRNLNSVPVSG--------DETQRKKSTNKLDSPIPTSEHSEDAAASTPLGAAALKGHARRLSRGLTRGRSXXXXXXXXXXXSASPATSRSPSLATKLGMTLRGAIMGKTQLGVHNPHA---ADVHTPAANLSDADAGSDATYSTGASSA--KRDESRRERRASRPRGGALL------DGGKDHGGVSSDGFDSDIFRQDSPMAATAYGGDPRNLPDAVYSYIGAREKMEHEMSASGPVFLPRVDNLAAKTVAEGAVPAWGKLRGGSLDITKQASSTTQRTEQHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYACACELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQESRVRTTKTFKFNAADAQQRLLWVTVIEALMKRHGWGMDADRCRSMRAPRHGGLTAGAGDSLAWGNTWGGGEAEG------TEPAVKRHVSLRLNDGLNGAEAVQEVSSPLRADHRQQERSRKG-SKSSVMNFVEDRDDGDLNLQQGPHHQQNDEEMLAMLRGTTSPAPQLQQRGLSIPYSPGGKRGSLTTGALSPPMP-FGGARRQSSLKSD 988
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: A0A835ZLL0_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLL0_9STRA) HSP 1 Score: 281 bits (718), Expect = 2.710e-76 Identity = 185/439 (42.14%), Postives = 234/439 (53.30%), Query Frame = 1
Query: 1819 NLPEAVHSYIGARERMEQEMSASGPVFLPRPANLASSPRDGATPWTRRRGSVDITKQAPSTTQLSEQHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYCVLYAGACELRYYRS---------------------------HVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLVVLHKGDGRHPGLHIRPGHESRVSTTKTFKFNAADAQQRLLWVTVIEALMKKHGWGAYPD-----HRRSMRAPGHGGASADAAGLHWGTWGGEAEKSAAGGETAPHTKSCGRSIVRDHACHRGCLKT-LP---LPDR-------KNATVPGEPDPGPRKGSVLTFVEGNDHIVRQNDT-RDMLLIEGSTGGATRRGISIPYSPRGRMGSLTTSALSPPVPTM-------GGARRQSSLKSDMF 2982
+LP AV YI R ME+ MSA+GP LP+P AS DG RR G++ +K+ S Q + + PFTEA+FKAGVSET HSTKQGILLEG LQK+SP S+ G +WH RYCVLYAG+CELRYYR+ +A+WGRIP+GERGS PLRL+V+IEQPS K+ GCRFDLV H+G GR+PG+ IRPG E V +TKT KF A QQRLLWVTVIE+LMK+HGWG P+ H + +S + ++ S GRS+ A G T LP L DR ++A G+ + GS ++ N+ R + G+ GG + IP+SP GR GSL T L+PP+ G RR SSLK D+
Sbjct: 607 SLPRAVDDYIDVRVDMERRMSATGPRRLPQPHAFASF-ADG-----RRHGTLSYSKELVSGAQTAAESMPFTEALFKAGVSETPHSTKQGILLEGWLQKYSPNSVAGRKWHARYCVLYAGSCELRYYRACQASGWRWFSWCVSVERQGVASETGHHDKDASWGRIPIGERGSTPLRLLVRIEQPSKAKWKGCRFDLVARHRGSGRYPGIQIRPGTERTVLSTKTLKFCAETPQQRLLWVTVIESLMKQHGWGDGPEAPQQRHAQXXXXXXXXXSSRSPSAMY----------------------STGRSLGATGATAFGNTMTELPAKWLDDRHGTLSFVEDAASGGDKESA--DGSAALSDIASEPAEDDNEAERRHAPVHGAVGG-----VKIPFSPGGRRGSLVTQTLTPPIADRRASASADGAQRRSSSLKRDLL 1010
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: A0A7S3UTN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTN7_HETAK) HSP 1 Score: 113 bits (282), Expect = 1.240e-23 Identity = 68/155 (43.87%), Postives = 87/155 (56.13%), Query Frame = 1
Query: 2080 KQGILLEGDLQKF-SPESMRGVRWHKRYCVLYAGACELRYYRSHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLVVLHKGDGRH----------PGLHIRPGHESR-----------VSTTKTFKFNAADAQQRLLWVTVIEALMK 2478
KQG LLEG L K+ S ++R WH+RY VL A + ELRYY ++AWG IPL E+ ++PLR V +IE P+D K+ G RFDLV + G G++ PG R G E KTFK A DA RLLWVTV++ LM+
Sbjct: 145 KQGALLEGALLKWASGGALRRGGWHERYFVLLARSRELRYYADFTDSAWGSIPLEEKCAVPLRTVERIEVPTDAKWAGRRFDLVCVDWGGGKYAADEDPQPGAPGGGEREGEEGTPXXXXXXXXXXXRAGKTFKLVAPDAATRLLWVTVLQDLMR 299
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: A0A1W0A2G2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2G2_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.380e-18 Identity = 58/157 (36.94%), Postives = 81/157 (51.59%), Query Frame = 1
Query: 2086 GILLEGDLQKFSPESMRGVR-WHKRYCVLYAGACELRYYRSHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLVVLHKGDGRHPGLH------------IRPGHESRVSTT----KTFKFNAADAQQRLLWVTVIEALMKKHGWGAYPD 2505
G+LLEG L++ +RG++ W+ RY VLYA ELRYY V++ WG IPLGE GSI LRL+ +I +PS KY GCRFD+ G P L P ++ TT + + A Q +LWV +++L+ + PD
Sbjct: 189 GVLLEGWLRQKQRRGIRGLKKWNSRYFVLYAKVHELRYYSDVVQSGWGPIPLGEIGSISLRLIQRISKPSHPKYKGCRFDITCRSSSSGV-PDLDDDPLSSDDEAKKASPKQPPKIKTTPKASRVYSLIADSPQTTVLWVNTLDSLLTRSVNSPRPD 344
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: A0A5D6YFM8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFM8_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.090e-15 Identity = 60/189 (31.75%), Postives = 89/189 (47.09%), Query Frame = 1
Query: 2086 GILLEGDLQKFSPESMRGV-RWHKRYCVLYAGACELRYYRSHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLVVLHKGDGRHPGLHIRPGHES--------------------------RVSTTKT---FKFNAADAQQRLLWVTVIEALMKKHGWGAYPD------HRRSMRAPGHGGA 2544
G+LLEG L++ ++G+ RW+ RY VLYA + E+RYY V +AWG IPLGE GSI LRL+ KI +P KY GCRFD+ + + ++ E+ R ST ++ + A Q + W++ +++L+ + PD APG GGA
Sbjct: 439 GVLLEGWLRQKQRRGVKGMKRWNARYFVLYAKSNEVRYYADVVPSAWGPIPLGEIGSISLRLIQKISKPGHPKYRGCRFDITCRNSWGTHYADDYVSSDDENXXXXXXXXXXXXXXANADAAATAKQERTSTPRSSRMYSLVADSPQTTVTWMSALDSLLVRSANSPRPDVSTGTGATAGATAPGSGGA 627
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: A0A8K1C7U9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7U9_PYTOL) HSP 1 Score: 92.4 bits (228), Expect = 2.190e-15 Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 2086 GILLEGDLQKFSPESMRGVR-WHKRYCVLYAGACELRYYRSHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLV 2328
G+LLEG L++ ++G++ W+ RY VLYA E+RYY V++AWG IPLGE GSI LRL+ +I +PS KY GCRFD+
Sbjct: 348 GVLLEGWLRQKQRRGVKGMKKWNSRYFVLYAKTNEIRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKPSHPKYKGCRFDIT 429
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: K3WY78_GLOUD (PH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WY78_GLOUD) HSP 1 Score: 92.0 bits (227), Expect = 2.280e-15 Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = 1
Query: 2089 ILLEGDLQKFSPESMRGVR-WHKRYCVLYAGACELRYYRSHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLVVLHKGDGRHPGLHI------------------RPGHESRVSTTKTFKFNAADAQQRLLWVTVIEALMKK 2481
++LEG L++ M+G++ W+ RY VLYA E+RYY V++AWG IPLGE GSI LRL+ +I +PS KY GCRFD+ + + ++ + S +++ + A Q + WV +++L+++
Sbjct: 484 VVLEGWLRQKQRRGMKGMKKWNTRYFVLYAKTNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKPSHPKYRGCRFDITCRNSWGTHYADDYVSSDXXXXXXXXXXXXXXXKQERSSTPRSSRVYSLMADSPQTTVTWVNTLDSLLRQ 633
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: A0A0W8DTJ9_PHYNI (PH domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DTJ9_PHYNI) HSP 1 Score: 91.3 bits (225), Expect = 3.520e-15 Identity = 52/167 (31.14%), Postives = 83/167 (49.70%), Query Frame = 1
Query: 2086 GILLEGDLQKFSPESMRGVR-WHKRYCVLYAGACELRYYRSHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLVVLHKGDGRHPGLHIRPGHESRVST--------------------------TKTFKFNAADAQQRLLWVTVIEALMKKHGWGAYPD 2505
G+LLEG L++ ++G++ W+ RY VLYA + E+RYY V++AWG IPLGE GSI LRL+ +I + S KY GCRFD+ + + ++ E+ ST ++ + A Q + WV ++++L+ + PD
Sbjct: 374 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNSWGTHYADDYVSSDEENANSTNXXXXXXXXXXXSNPAKQEKSGTPKSSRVYSLVADSPQVTVAWVNMLDSLLTRSANSPRPD 540
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: W2QA92_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QA92_PHYPN) HSP 1 Score: 91.3 bits (225), Expect = 5.140e-15 Identity = 52/167 (31.14%), Postives = 83/167 (49.70%), Query Frame = 1
Query: 2086 GILLEGDLQKFSPESMRGVR-WHKRYCVLYAGACELRYYRSHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLVVLHKGDGRHPGLHIRPGHESRVST--------------------------TKTFKFNAADAQQRLLWVTVIEALMKKHGWGAYPD 2505
G+LLEG L++ ++G++ W+ RY VLYA + E+RYY V++AWG IPLGE GSI LRL+ +I + S KY GCRFD+ + + ++ E+ ST ++ + A Q + WV ++++L+ + PD
Sbjct: 374 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNSWGTHYADDYVSSDEENANSTNXXXXXXXXXXXSNPAKQEKSGTPKSSRVYSLVADSPQVTVAWVNMLDSLLTRSANSPRPD 540
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Match: A0A329SND2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SND2_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.170e-14 Identity = 53/167 (31.74%), Postives = 84/167 (50.30%), Query Frame = 1
Query: 2086 GILLEGDLQKFSPESMRGVR-WHKRYCVLYAGACELRYYRSHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYHGCRFDLVVLHKGDGRHPGLHIRPGHES---RVST-----------------------TKTFKFNAADAQQRLLWVTVIEALMKKHGWGAYPD 2505
G+LLEG L++ ++G++ W+ RY VLYA + E+RYY V++AWG IPLGE GSI LRL+ +I + S KY GCRFD+ + + ++ E+ VST ++ + A Q + WV ++++L+ + PD
Sbjct: 375 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNSWGTHYADDYVSSDEENASNNVSTNVNNDKATASTPAKQEKSGTPKSSRVYSLVADSPQVTVAWVNMLDSLLTRSANSPRPD 541 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8346.16525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8346.16525.1 >prot_S-dermatodea_contig8346.16525.1 ID=prot_S-dermatodea_contig8346.16525.1|Name=mRNA_S-dermatodea_contig8346.16525.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=996bp MARSASHRRDSSDARVIMVPERAGGEKSTRSSKSRAKIDDKKISIAGRMWback to top mRNA from alignment at S-dermatodea_contig8346:2898..6828+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8346.16525.1 ID=mRNA_S-dermatodea_contig8346.16525.1|Name=mRNA_S-dermatodea_contig8346.16525.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3931bp|location=Sequence derived from alignment at S-dermatodea_contig8346:2898..6828+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8346:2898..6828+ >mRNA_S-dermatodea_contig8346.16525.1 ID=mRNA_S-dermatodea_contig8346.16525.1|Name=mRNA_S-dermatodea_contig8346.16525.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=5976bp|location=Sequence derived from alignment at S-dermatodea_contig8346:2898..6828+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |