mRNA_S-dermatodea_contig8332.16518.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: D7FTH9_ECTSI (Diphosphomevalonate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH9_ECTSI) HSP 1 Score: 389 bits (1000), Expect = 5.960e-133 Identity = 197/221 (89.14%), Postives = 210/221 (95.02%), Query Frame = 1
Query: 1 SEEDISKNKRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKGEREDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
+EED+SKNKRFQAVIRQVRALA++K D+ TG VVVA DW +Y VRIASRNTFPTAAGLASSAAGLACLTFSL+KLFNAKESFDGELS+IARQGSGSACRSLYGGFV+WQKG REDARDSIAVQVADEHHWPE+RA+ILVVSADKKDTSST+GMSTSV TSPLLGFRAKEVVEPRL EIEKAYLEKDF TFGKITMQDSNQFHATCLDT+PPIFYMNDVSR
Sbjct: 71 TEEDVSKNKRFQAVIRQVRALATEKRDEATGEVVVAEGDWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLAKLFNAKESFDGELSSIARQGSGSACRSLYGGFVKWQKGVREDARDSIAVQVADEHHWPEMRALILVVSADKKDTSSTSGMSTSVQTSPLLGFRAKEVVEPRLAEIEKAYLEKDFATFGKITMQDSNQFHATCLDTYPPIFYMNDVSR 291
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: A0A835YQZ6_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ6_9STRA) HSP 1 Score: 311 bits (797), Expect = 1.130e-101 Identity = 162/220 (73.64%), Postives = 178/220 (80.91%), Query Frame = 1
Query: 4 EEDISKNKRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKGEREDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
EED+ NKR VI+ VRALA DK D TG V+V DW +Y V IASRNTFPTAAGLASSAAG ACLTF+L++LF A E++DGEL+AIARQGSGSACRSLYGGFVRWQKGER DA DSIAVQVADE HWPELRA+I V SA KK TSST+GM TSV TS LL RA +VEPRL IE AYL +DF FG+ TM DSNQFHATCLDT+PPIFYMNDVSR
Sbjct: 71 EEDVESNKRLTTVIKLVRALAGDKVDAKTGEVLVYKADWPQYHVHIASRNTFPTAAGLASSAAGYACLTFALAQLFAACETYDGELTAIARQGSGSACRSLYGGFVRWQKGERADAADSIAVQVADEAHWPELRALIFVASAAKKGTSSTSGMGTSVATSELLRHRAAALVEPRLAAIEAAYLARDFAGFGRATMVDSNQFHATCLDTYPPIFYMNDVSR 290
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: A0A7S4J2Z5_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J2Z5_9STRA) HSP 1 Score: 289 bits (739), Expect = 1.420e-93 Identity = 154/221 (69.68%), Postives = 175/221 (79.19%), Query Frame = 1
Query: 4 EEDISKNKRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKG-EREDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
EE +KRF+A + VR LA+D+ D TG VVV +W++ V IAS NTFPTAAGLASSAAG A L +L+KLFNAKE++ GEL+AIARQGSGSACRSLYGGFV W+ G + ED DSIA QVA E HWPE+RAVI+VVS KKDTSSTAGMSTSV TS LL RAKEVV R+ IEKA+LEKDF +FG ITM DSNQFHATCLDTFPPIFYMND+SR
Sbjct: 76 EEGACLSKRFRACVDGVRRLANDRVDPKTGEVVVTKDEWADMHVHIASYNTFPTAAGLASSAAGYAALVAALAKLFNAKETYPGELTAIARQGSGSACRSLYGGFVAWRMGGQAEDWSDSIAEQVASESHWPEIRAVIMVVSDAKKDTSSTAGMSTSVKTSKLLAHRAKEVVPERMAAIEKAWLEKDFESFGNITMADSNQFHATCLDTFPPIFYMNDISR 296
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: A0A7S1ZIN1_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIN1_9STRA) HSP 1 Score: 286 bits (732), Expect = 1.770e-92 Identity = 153/221 (69.23%), Postives = 176/221 (79.64%), Query Frame = 1
Query: 4 EEDISKNKRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKGE-REDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
EE+ S +KRF+A + V+ LASD+ D TG VVV +DW VRI+S NTFPTAAGLASSAAG A L F+L+KLF AKE++ GELS IARQGSGSACRSLYGGFV W+ G +ED DS+A QVA E HWPE+RA+ILVVS KKDTSST+GMSTSV TS LL RAKEVV R+ EIEKA+L KDF +F KITM DSNQFHATCLDT+PPIFYMNDVS+
Sbjct: 78 EENASTSKRFRACVDGVKRLASDRIDPTTGDVVVKKEDWDTMHVRISSYNTFPTAAGLASSAAGYAALVFALAKLFCAKETYPGELSVIARQGSGSACRSLYGGFVAWRMGGLKEDWTDSLAEQVAPETHWPEIRALILVVSDAKKDTSSTSGMSTSVATSLLLAHRAKEVVPKRMEEIEKAWLAKDFSSFAKITMADSNQFHATCLDTYPPIFYMNDVSK 298
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: A0A7R9UJI1_DIALT (Diphosphomevalonate decarboxylase (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UJI1_DIALT) HSP 1 Score: 281 bits (719), Expect = 1.760e-91 Identity = 144/224 (64.29%), Postives = 175/224 (78.12%), Query Frame = 1
Query: 4 EEDISKN----KRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKGEREDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
EED + N KR + + ++R LA D+ D +G VV A + + Y V + SRNTFPTAAGLASSAAG ACL +L+KL+N +E+++G+LS IARQGSGSACRSLYGGFV+W KG + DA DS+AV VAD+ HWPELRAVILV++A KK+T ST GM TSV TSPLL FRA+ VVEPRL +E AY +DF FGK+TMQDSNQFHATCLDT+PPIFY+NDVSR
Sbjct: 74 EEDTAGNGTHAKRLRKCLAEMRGLARDRVD-ASGAVVCTATELASYKVHVVSRNTFPTAAGLASSAAGYACLVHTLAKLYNVEEAYEGQLSTIARQGSGSACRSLYGGFVKWVKGRKPDATDSMAVCVADQAHWPELRAVILVINAGKKETPSTEGMQTSVETSPLLAFRAESVVEPRLAAMEAAYRARDFEAFGKLTMQDSNQFHATCLDTYPPIFYLNDVSR 296
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: A0A812KE47_9DINO (Diphosphomevalonate decarboxylase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KE47_9DINO) HSP 1 Score: 280 bits (716), Expect = 1.270e-90 Identity = 148/220 (67.27%), Postives = 165/220 (75.00%), Query Frame = 1
Query: 4 EEDISKNKRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKGEREDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
EEDIS NKR QAV+R++R A DK D G +VAA DW Y V I SRNTFPTAAGLASSAAG ACLT +L+ LF E++ GEL+ IAR GSGSACRSL+GGFVRW GE D +DS+AVQVA E HWPELR ++ VVS KKDT ST GM SV TS LL RA VV RL +IE A+L KDF TFG+ITM DSNQFHATCLDTFPPIFYMND SR
Sbjct: 87 EEDISGNKRVQAVLREIRFRAGDKKD-AEGKTLVAAGDWDGYKVHIVSRNTFPTAAGLASSAAGYACLTQALADLFAVSETYPGELTTIARMGSGSACRSLHGGFVRWSMGEAADGKDSMAVQVAPESHWPELRVLVCVVSDKKKDTGSTPGMVASVKTSELLAHRATAVVPKRLADIEAAFLAKDFETFGRITMADSNQFHATCLDTFPPIFYMNDTSR 305
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: A0A7R9ULP1_DIALT (Diphosphomevalonate decarboxylase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9ULP1_DIALT) HSP 1 Score: 281 bits (719), Expect = 5.160e-90 Identity = 144/224 (64.29%), Postives = 175/224 (78.12%), Query Frame = 1
Query: 4 EEDISKN----KRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKGEREDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
EED + N KR + + ++R LA D+ D +G VV A + + Y V + SRNTFPTAAGLASSAAG ACL +L+KL+N +E+++G+LS IARQGSGSACRSLYGGFV+W KG + DA DS+AV VAD+ HWPELRAVILV++A KK+T ST GM TSV TSPLL FRA+ VVEPRL +E AY +DF FGK+TMQDSNQFHATCLDT+PPIFY+NDVSR
Sbjct: 74 EEDTAGNGTHAKRLRKCLAEMRGLARDRVD-ASGAVVCTATELASYKVHVVSRNTFPTAAGLASSAAGYACLVHTLAKLYNVEEAYEGQLSTIARQGSGSACRSLYGGFVKWVKGRKPDATDSMAVCVADQAHWPELRAVILVINAGKKETPSTEGMQTSVETSPLLAFRAESVVEPRLAAMEAAYRARDFEAFGKLTMQDSNQFHATCLDTYPPIFYLNDVSR 296
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: A0A3R7D131_9STRA (Diphosphomevalonate decarboxylase (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D131_9STRA) HSP 1 Score: 276 bits (706), Expect = 1.320e-89 Identity = 140/214 (65.42%), Postives = 166/214 (77.57%), Query Frame = 1
Query: 22 NKRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKGEREDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
NKR Q V+++VR LA+ K DV G + A W +Y + I S NTFPTAAGLASSAAG ACL +L +L+ A+E ++G+ SAIARQGSGSACRSL+GGFVRW KG + D DS+A+Q+AD+ HWPEL A+I VV+ +KDTSST GM+TS TS LLGFRA+EVV RL IE AY KDF TFGKITM DSNQFHATCLDTFPPIFYMN+VSR
Sbjct: 78 NKRIQTVLKEVRRLATSKAVDVNGHAI-AKDAWDQYKLHIVSINTFPTAAGLASSAAGYACLVAALVELYAAEEEYEGQFSAIARQGSGSACRSLHGGFVRWDKGVKSDGSDSVAIQIADDKHWPELEAIICVVNDKEKDTSSTDGMNTSKETSELLGFRAREVVNKRLAAIEAAYKAKDFETFGKITMMDSNQFHATCLDTFPPIFYMNEVSR 290
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: A0A6G0XPY7_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPY7_9STRA) HSP 1 Score: 277 bits (708), Expect = 3.430e-89 Identity = 139/214 (64.95%), Postives = 166/214 (77.57%), Query Frame = 1
Query: 22 NKRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKGEREDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
NKR Q V++++R LASDK D G + A DW+ Y + I S NTFPTAAGLASSAAG ACL +L++LF A+E ++G+ SAIARQGSGSACRSL+GGFVRW KG + D DS+A+Q+AD HWPEL A+I VV+ +KDTSST GM TS TS LLGFRA+EVV+ RL IE AY DF TFGKITM DSNQFHATCLDT+PPIFYMN++SR
Sbjct: 70 NKRIQVVLKEMRRLASDKAVDQDGNTIAKA-DWNNYKLHIVSINTFPTAAGLASSAAGYACLVAALAELFAAEEEYEGQFSAIARQGSGSACRSLHGGFVRWDKGSKVDGSDSLAIQIADHEHWPELEAIICVVNDKEKDTSSTDGMMTSKNTSELLGFRAREVVDKRLAAIEAAYKAMDFETFGKITMMDSNQFHATCLDTYPPIFYMNEISR 282
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Match: A0A485L4T9_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4T9_9STRA) HSP 1 Score: 276 bits (706), Expect = 6.680e-89 Identity = 142/214 (66.36%), Postives = 166/214 (77.57%), Query Frame = 1
Query: 22 NKRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRNTFPTAAGLASSAAGLACLTFSLSKLFNAKESFDGELSAIARQGSGSACRSLYGGFVRWQKGEREDARDSIAVQVADEHHWPELRAVILVVSADKKDTSSTAGMSTSVLTSPLLGFRAKEVVEPRLVEIEKAYLEKDFPTFGKITMQDSNQFHATCLDTFPPIFYMNDVSR 663
NKR QAV++++R LAS D TG V +A DW Y + I S NTFPTAAGLASSAAG ACL S +LF A+E +DG+ SAIARQGSGSACRSL+GGFVRW KG + D DS+A+Q+AD+ HWPEL A+I VV+ +KDTSST GM TS TS LL FRA+EVV+ RL IE AYL KDF TFGKITM DSNQFHATCLDT+PPIFYMN++SR
Sbjct: 70 NKRIQAVVKEMRRLASGNAVDATG-VKIAKADWPLYKLHIVSINTFPTAAGLASSAAGYACLVASSVELFAAEEEYDGQFSAIARQGSGSACRSLHGGFVRWDKGLKADGTDSLAIQIADDKHWPELEAIICVVNDKEKDTSSTDGMMTSKNTSDLLHFRAREVVDKRLAAIEAAYLAKDFETFGKITMMDSNQFHATCLDTYPPIFYMNEISR 282 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8332.16518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8332.16518.1 >prot_S-dermatodea_contig8332.16518.1 ID=prot_S-dermatodea_contig8332.16518.1|Name=mRNA_S-dermatodea_contig8332.16518.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=221bp SEEDISKNKRFQAVIRQVRALASDKTDDVTGGVVVAAQDWSEYGVRIASRback to top mRNA from alignment at S-dermatodea_contig8332:74..7863+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8332.16518.1 ID=mRNA_S-dermatodea_contig8332.16518.1|Name=mRNA_S-dermatodea_contig8332.16518.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7790bp|location=Sequence derived from alignment at S-dermatodea_contig8332:74..7863+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8332:74..7863+ >mRNA_S-dermatodea_contig8332.16518.1 ID=mRNA_S-dermatodea_contig8332.16518.1|Name=mRNA_S-dermatodea_contig8332.16518.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1326bp|location=Sequence derived from alignment at S-dermatodea_contig8332:74..7863+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |