mRNA_S-dermatodea_contig833.16517.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: A0A6H5J8M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8M8_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 7.050e-141 Identity = 328/607 (54.04%), Postives = 369/607 (60.79%), Query Frame = 3
Query: 48 ESLLTEDDFNDFAAAVGEGLDG-SDDEASSDDFLSWLLVHADTIDPKLKLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXNAVAPLQEYPGGGLSTILGAFASPPASTLAPAEGTAVAPGCLAASITPPSSTAHTWAIAGPGPVGVVGTGAGDYAGGE----------GGTPGAASDLHGRLAAAGGIPSDPVLAMQMGARMALAGNLNLIPFG--MGSGAGTTGADASTAVAPAPLQPDVSTQTERCRLKQQGGAALTPTGTNCPAHTPATQTA----GLPAWTSFPPPPEWSKVE---QSIPPTAVGVSSTG--EAFGTRGGAVRDGSAVEGFEVGLAGLGSGTDGANVGDKRPRASSTAGESKP------GRDTFKDGRRRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRKRGGLSFILRDELGVSEEQIARIQERRTRIKSLLAELRESLRLVKNLQKSSEAKSAKFEEVMARLQSSFSPQQIARLLLWVSTNRAHISKLPLLPKDILQQR 1784
+ +LTEDDF+DFAAAVGEG DG S+D+A SDDFLSWLL+HAD+IDPKL D+ XXXXXXXXX + T ++ + + + G GAGD +GG+ G P LA G IPSDPVLAMQMGARMAL+GNL LIPFG MGSG G GA T A A STQ + + GLPAWT P PP+W + E Q +PP+ SS+ E G G G+ G AG+ +G G KRPRA A +K RDT KDGR+RK+M+ GELEERVKQVSEDNG+LKLHLSNVNDKL LMA++KK MEAEIAAKL QRS PS+ N ASLAEALSRFKDLYADYG QRKQEVEFH +QLER IVPTDTTKMSLWTLEQDESFYKDRKRG LS ILR ELGVSEEQI RIQERR RIKSLL EL ESLRLV++LQKSSEAK+ KFEEVM RLQS+FSPQQIARLLLWVS NRAHISKLPLLPK +LQQR
Sbjct: 2 DDILTEDDFDDFAAAVGEGGDGGSEDDARSDDFLSWLLLHADSIDPKL--DDCVIDSDGSEVAAPARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGSTRDTTASDSDRVGKEG-------GAGDPSGGDASFGVGAVGIGSAPEQGVLPSSSLATVGRIPSDPVLAMQMGARMALSGNLGLIPFGASMGSG-GIAGAIGGTPAAGA-KPTAASTQAQHPLIAPPAALXXXXXXXXXXXXXXXXXXXXXXDGLPAWTGLPHPPQWLETEKHPQGVPPSHKANSSSRGVETPGVTGAGSPKGN---GSAWQAAGVDAGAYSGGEGKKRPRADGAAQAAKTEETKARARDTSKDGRKRKKMTLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDLNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLERQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELGVSEEQIERIQERRARIKSLLNELGESLRLVRDLQKSSEAKTTKFEEVMERLQSAFSPQQIARLLLWVSANRAHISKLPLLPKTLLQQR 594
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: D8LKP0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP0_ECTSI) HSP 1 Score: 307 bits (786), Expect = 4.260e-91 Identity = 254/522 (48.66%), Postives = 285/522 (54.60%), Query Frame = 3
Query: 48 ESLLTEDDFNDFAAAVGEGLDG-SDDEASSDDFLSWLLVHADTIDPKLKLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXNAVAPLQEYPGGGLSTILGAFASPPASTLAPAEGTAVAPGCLAASITPPSSTAHTWAIAGPGPVGVVGTGAGDYAGGEGGTPGAASDLHGR----------LAAAGGIPSDPVLAMQMGARMALAGNLNLIPFG--MGSGAGTTGADASTAVAPAPLQPDVSTQTER------CRLKQQGGAALTPTGTNCPAHTPATQTAGLPAWTSFPPPPEWSKVE---QSIPPT-AVGVSSTG-EAFGTRGGAVRDGSAVEGFEVGL-AGLGSGTDGANVGDKRPRASSTAGESKP------GRDTFKDGRRRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRKRGGLSFILRDELG 1520
+ +LTEDDF+DFAAAVGEG DG S+D+A SDDFLSWLLVHAD+IDPKL+ XXX S +G VG G GAGD +GG+ A + LA G IPSDPVLAMQMGA+MAL+GNL LIPFG MG+G G GA + T A A STQ + L P GLPAWT P PP+W K E Q +PP+ SS G E G G G+ VG+ AG SG + G KRPRA A +K RDT KDGR+RK+MS GELEERVKQVSEDNG+LKLHLSNVNDKL LMA++KK MEAEIAAKL QRS PS++N ASLAEALSRFKDLYADYG QRKQEVEFH +QLER IVPTDTTKMSLWTLEQDESFYKDRKRG LS ILR ELG
Sbjct: 2 DDILTEDDFDDFAAAVGEGGDGGSEDDARSDDFLSWLLVHADSIDPKLE--------DCVIGSDGSEVAAPARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNTRDTTASGADRVGKEG-GAGDPSGGDAAFGVGAVGIDSAPEEGVLQSSSLATVGRIPSDPVLAMQMGAQMALSGNLGLIPFGASMGTG-GIAGAISGTPTAGA-KPTAASTQAQHPLIAPPAALXXXXXXXXXXXXXXXXXXVPPL--GGLPAWTGLPHPPQWLKKEEHPQGVPPSHKTNSSSRGVETPGVTGAGSPKGAGSARQAVGVDAGAYSGGE----GKKRPRADGAAQTAKTEETRARARDTSKDGRKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLERQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG 506
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: A0A7S1U3Q8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3Q8_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.130e-39 Identity = 92/213 (43.19%), Postives = 135/213 (63.38%), Query Frame = 3
Query: 1104 RRRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRKRGGLSFILRDELGVSEEQIARIQERRTRIKSLLAELRESLRLVKNLQKSSEAKSAKFEEVMARLQSSFSPQQIARLLLWVSTNRAHI 1742
R++KR EL+ER++ + +N L HL+NV ++ KL+ KKAMEA I L +S A+ A LA + FK+ YADYG QR++E FH QLERL++PT TTKMSLWT+EQ SF+ D + L IL+ ELGV++EQ RI R R+K + +LR ++ L+++L++ K ++F+ M +L +P Q A+L+LWV TNR +
Sbjct: 9 RKKKRPKIEELQERLEVLRSENSELTHHLTNVEERHKLLNAEKKAMEALIRRTLEATQS--GAADPAQLARCIGDFKNRYADYGPQRQRECNFHMDQLERLLIPTQTTKMSLWTMEQPPSFFDDPNKNSLGAILKRELGVTQEQRDRISRLRERVKEAVRDLRAAVALLRDLREHINHKHSRFDVRMTQLMEILTPMQSAKLILWVKTNRHRV 219
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: A0A7S4DKP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKP9_HETAK) HSP 1 Score: 152 bits (384), Expect = 3.400e-36 Identity = 93/234 (39.74%), Postives = 144/234 (61.54%), Query Frame = 3
Query: 1107 RRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRK-RGGLSFILRDELGVSEEQIARIQERRTRIKSLLAELRESLRLVKNLQKSSEAKSAKFEEVMARLQSSFSPQQIARLLLWVSTNRA---------HISKLPLLPKDILQ 1778
+RKR +A ELEER++ + E++ +LK HL N DK +A +K ME ++ A+L + L ++KDLY+DYG QRK+EV+FH QL+ L+ PT TTKMSLWTLEQDE+F+ D L +IL E+G++ EQ +I+ R++I L+ EL++S+ L++ ++ +AK KF++ M LQ+ +P+Q +LLLW++ N+ H + PL K+ LQ
Sbjct: 185 KRKRETAEELEERLRVLKEEHNQLKSHLQNTEDKASQIAEQKFKMEKQLRAELQI--------GGTGIGPLLRQYKDLYSDYGEQRKKEVDFHLAQLQTLLTPTTTTKMSLWTLEQDEAFFADEADETSLMYILTQEMGLTPEQKTKIKGHRSKILGLVEELKKSVVLMQKIRDMVQAKHKKFDKHMGNLQALLTPKQSVQLLLWITNNKKLLEGYVPDFHQEEQPLEEKEQLQ 410
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: I2CPN1_NANGC (BZIP domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPN1_NANGC) HSP 1 Score: 140 bits (353), Expect = 1.920e-33 Identity = 93/230 (40.43%), Postives = 135/230 (58.70%), Query Frame = 3
Query: 1083 RDTFKDGRRRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRKRGGLSFILRDELGVSEEQIARIQERRTRIKSLLAELRESLRLVKNLQKSSEAKSAKFEEVMARLQSSFSPQQIARLLLWVSTNRAHI-SKLPLLPKD 1769
R++ ++ RRR+R A EL RV + +N RL E+ L +A+ +A L FK+ YADYG QR++EV FH +QLE L++PT TTKMSLWTLEQD++F++D + LS IL + LG+S EQ ++IQ RR RI+ L+ L+ESL L+ L+++ E + A+FEE M LQS +P Q +L+LWV+ N A + S +P +D
Sbjct: 15 RESARECRRRQRAHAEELASRVSALQAENRRLXXXXXXXXXXXXXXXXXXXXXXQEMEVMLQK------DASEEEMAGYLEHFKECYADYGDQRRKEVNFHLQQLEALLLPTQTTKMSLWTLEQDDTFFRDTGKTSLSAILLETLGISIEQKSKIQARRERIRHLVDHLKESLGLLGRLKENVEGRYARFEEHMGSLQSVLTPTQRVQLVLWVTKNEALLASSIPGFARD 238
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: A0A7S1GL93_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GL93_CYCTE) HSP 1 Score: 132 bits (333), Expect = 2.580e-29 Identity = 80/213 (37.56%), Postives = 128/213 (60.09%), Query Frame = 3
Query: 1104 RRRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRKRGGLSFILRDELGVSEEQIARIQERRTRIKSLLAELRESLRLVKNLQKSSEAKSAKFEEVMARLQSSFSPQQIARLLLWVSTNRAHI 1742
RRRK+ + E ++ + +N LK HL+NV+++ + ++ E E+ +R A++ L LS+F ++Y+DYG R +E+ FH KQLERL PT+ TKM LWTL Q E+F+ D KR ++ ILR ELG++ +Q +I E+R +I+ L L+E L L+ NL+ E K + + M++ Q +P+Q+ +LLLWV + +HI
Sbjct: 220 RRRKKPRLSDCESKLATLKAENELLKRHLANVSNRSEKFEEERRKQEHEM------RRLAEGGASSEQLRPLLSKFSEMYSDYGRHRDEELSFHLKQLERLAAPTNFTKMGLWTLGQSEAFFTDLKRNPIAGILRKELGITPQQGRKILEKRQKIRDLCTSLKECLGLLANLKTICEHKQKVYHDRMSKCQQILTPRQVVKLLLWVD-DHSHI 425
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: A0A0P1AA06_PLAHL (Camp responsive element modulator n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA06_PLAHL) HSP 1 Score: 110 bits (275), Expect = 1.780e-23 Identity = 73/232 (31.47%), Postives = 130/232 (56.03%), Query Frame = 3
Query: 1083 RDTFKDGRRRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRK-RGGLSFILRDELGVSEEQIARIQERRTRIKSLLAELRESLRLVKNLQKSSEAKSAKFEEVMARLQSSFSPQQIARLLLWVSTNRAHISKLPLLPKDIL 1775
R++ ++ RRRKR +EER +Q+ +N L+ L + ++ K + E+ ++ + A+ LAE + FK+ Y+DYG R+ + +H Q+ERL++PT TKM +W L QD+SF+++ + L IL ELG+SE+Q +IQ++R I + L+ +L L+ L+ K++ + M +LQ+ +P Q A+ ++WV+ N+A + L L + +L
Sbjct: 14 RESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEEL------EKMIKCGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQEEEDETSLPVILAKELGLSEDQKKKIQQQRGSISLICENLKSALELLAELKTEVTNKNSTLDTEMEKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRTVL 239
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: A0A5D6XWQ0_9STRA (BZIP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWQ0_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.000e-23 Identity = 77/232 (33.19%), Postives = 131/232 (56.47%), Query Frame = 3
Query: 1083 RDTFKDGRRRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRK-RGGLSFILRDELGVSEEQIARIQERRTRIKSLLAELRESLRLVKNLQKSSEAKSAKFEEVMARLQSSFSPQQIARLLLWVSTNRAHISKLPLLPKDIL 1775
R++ ++ RRRKR +EER +Q+ +N L+ L + +KL K + E+ ++ + A+ LAE + FK+ Y+DYG R+ + +H Q+ERL++PT TKM +W L QD+SF++D + L IL ELG+SEEQ +IQ++R I + L+ +L L+ L+ K++ + M +LQ+ +P Q A+ ++WV+ N+A + L L + +L
Sbjct: 313 RESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAMKLEEKEKNRVCEEL------EQMIQCGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPVILAKELGLSEEQKKKIQQQRGSISLICQNLKNALSLLDELKTEVIQKNSTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRSVL 538
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: A0A8K1CBI5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBI5_PYTOL) HSP 1 Score: 112 bits (281), Expect = 1.880e-22 Identity = 85/266 (31.95%), Postives = 144/266 (54.14%), Query Frame = 3
Query: 1008 SGTDGANVGDKRPRASSTAGES---------KPGRDTFKDGRRRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRKRG-GLSFILRDELGVSEEQIARIQERRTRIKSLLAELRESLRLVKNLQKSSEAKSAKFEEVMARLQSSFSPQQIARLLLWVSTNRAHISKLPLLPKDIL 1775
SG D N K+ R+SS+ ES + R++ ++ RRRKR +EER +Q+ +N L+ L + +K K + E+ ++ + A+ LAE + FK+ Y+DYG R+ +++H Q+ERL++PT TKM +W L QD+SF+ D + L IL ELG+SEEQ +IQ++R ++ L+ +L L+ L+ +K+ + M +LQ+ +P Q A+ ++WV+ N+A + L L + +L
Sbjct: 232 SGMDLTNQEIKQERSSSSGSESPDRLRKLKLERNRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAMKQEEREKNRVCEEL------EQMIQRGASEKELAEKIDNFKEQYSDYGHGRRSALDYHLHQIERLLLPTQVTKMCIWALRQDDSFWHDDEDDTSLPAILARELGLSEEQKKKIQQQRAPFLAICDNLKTALGLLNELKTQVASKNTTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRSVL 491
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Match: A0A6A3LMW2_9STRA (BZIP domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LMW2_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.890e-22 Identity = 74/232 (31.90%), Postives = 131/232 (56.47%), Query Frame = 3
Query: 1083 RDTFKDGRRRKRMSAGELEERVKQVSEDNGRLKLHLSNVNDKLKLMATRKKAMEAEIAAKLNTQRSVPSEANTASLAEALSRFKDLYADYGAQRKQEVEFHFKQLERLIVPTDTTKMSLWTLEQDESFYKDRK-RGGLSFILRDELGVSEEQIARIQERRTRIKSLLAELRESLRLVKNLQKSSEAKSAKFEEVMARLQSSFSPQQIARLLLWVSTNRAHISKLPLLPKDIL 1775
R++ ++ RRRKR +EER +Q+ +N L+ L + ++ K + E+ ++ + S A+ LAE + FK+ Y+DYG R+ + +H Q+ERL++PT TKM +W L QD+SF++D + L IL ELG++E+Q +IQ++R I + L+ +L L+ L+ K++ + M +LQ+ +P Q A+ ++WV+ N+A + L L + +L
Sbjct: 212 RESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEEL------EKMIQSGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPVILAKELGLTEDQKKKIQQQRGSISLICENLKSALGLLAELKTEVTNKNSTLDMEMEKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRSVL 437 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig833.16517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig833.16517.1 >prot_S-dermatodea_contig833.16517.1 ID=prot_S-dermatodea_contig833.16517.1|Name=mRNA_S-dermatodea_contig833.16517.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=600bp MHRGGNMEESLQGESLLTEDDFNDFAAAVGEGLDGSDDEASSDDFLSWLLback to top mRNA from alignment at S-dermatodea_contig833:10901..23724+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig833.16517.1 ID=mRNA_S-dermatodea_contig833.16517.1|Name=mRNA_S-dermatodea_contig833.16517.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=12824bp|location=Sequence derived from alignment at S-dermatodea_contig833:10901..23724+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig833:10901..23724+ >mRNA_S-dermatodea_contig833.16517.1 ID=mRNA_S-dermatodea_contig833.16517.1|Name=mRNA_S-dermatodea_contig833.16517.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3600bp|location=Sequence derived from alignment at S-dermatodea_contig833:10901..23724+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |