prot_S-dermatodea_contig8316.16499.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8316.16499.1
Unique Nameprot_S-dermatodea_contig8316.16499.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length293
Homology
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: D8LQ57_ECTSI (DUF1990 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ57_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 1.070e-116
Identity = 180/278 (64.75%), Postives = 201/278 (72.30%), Query Frame = 0
Query:   17 LLEAASMGTRVTFLQEPSAAYVKRYLEQQDDICASTNHQFAGFTAPTSADGDGAAPPRPPSGFQERTVRVRLGSGKRTYERGREALLRWRMHDGSSWARIKLGRRPKRSNSQLNMVTVAKACAGMTWCINPCLVLYEHKDTTLRFLAPPGTDPHHPLHS----PNDTPTRTHGAKQEGWLWAGGSPTSAPRWASFLAGSKHKGKQSAVAYTTKEGHFIQGEERMRVLWFCGRGGDDSVWFEVYSVSRGAGFVGGVVFPFVQSMQRRFFREQAETMRQI 290
            L E  S GT  TF +EPSA+ V+RYLE+QD   +  NH FAGF+   +A            GFQERTVR  LGSGK TY RGREALLRW+MH+GSSWARI LG+RP R   Q N+VT+AKACAG+ WCINPC VLYE  D  LRF+APPG D +  L      P +   R  G    G LWAG  PTSAP WASFL G KHKG+QSAVAY TK GH IQGEERMRVL FCG GGDDSVWFEVYSVSRGAG VGG+VFPFVQSMQRRFFREQAETM+++
Sbjct:   14 LAEVISSGTTFTFFREPSASVVRRYLERQDTEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVRAHLGSGKETYARGREALLRWQMHEGSSWARIFLGQRPPRPALQRNLVTIAKACAGLVWCINPCQVLYERNDVALRFIAPPGADANRSLDDGEARPVENTKRVMGGGG-GALWAGKRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRV 290          
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: W7TBY2_9STRA (DUF1990 domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBY2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 7.790e-22
Identity = 77/220 (35.00%), Postives = 98/220 (44.55%), Query Frame = 0
Query:   83 TVRVRLGSGKRTYERGREALLRWRMHDGSSWARIKLGRR----PKRSNSQLNMVTVAKACAGMTWCINPCLVLYEHKDTTLRFLAPPGTDPHHPLHSPNDTPTRTHGAKQEGWLWAGGSPTSAPR-WASFLAGSKHKGKQSAVAYTTKEGHFIQGEERMRVLWFC-GRG--------GDDSVWFEVYSVSRGAGFVGGVVFPFVQSMQRRFFREQAETMR 288
            ++ V LG G++TY + REAL  W+MH  S    I  GR            + +VT+A+   G  W +NPC V YE  D   R                        G                PR W             SAVAYTT   H I GEERMRV+W+  GR         G+D VWFE+ SV+RG G+VG ++FP  Q MQR FF+EQ   M+
Sbjct:  143 SMEVCLGRGQKTYAKAREALRGWKMHARSPTTGIVRGREGXXXXXXXXXXVGVVTLARVYGGGAWVMNPCCVAYESFDKQDR---------------------NGEGEGGRXXXXXXXXXXGGPRVW-------------SAVAYTTVGRHLIAGEERMRVIWYPRGRXXXXXXXXXGEDEVWFEIVSVARGNGWVGRLLFPSTQRMQRHFFQEQLRGMQ 328          
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: A0A4D9CTF5_9STRA (DUF1990 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTF5_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.510e-15
Identity = 61/169 (36.09%), Postives = 78/169 (46.15%), Query Frame = 0
Query:  129 LNMVTVAKACAGMTWCINPCLVLYEHKDTTLRFLAPPGTDPHHPLHSPNDTPTRTHGAKQEGWLWAGGSPTSAPRWASFLAGSKHKGKQSAVAYTTKEGHFIQGEERMRVLWFC-GRG--------GDDSVWFEVYSVSRGAGFVGGVVFPFVQSMQRRFFREQAETMR 288
            + +VT+A+   G  W +NPC V YE  D   R                        G  +EG            R   +          SAVAYTT   H I GEERMRV+W+  GRG        G+D VWFE+ SV+RG G+VG ++FP  Q MQR FF+EQ   M+
Sbjct:  267 VGVVTLARVYGGGAWVMNPCCVAYESFDRQDR-----------------------DGEGEEGRKGXXXXXXXXXRARVW----------SAVAYTTVGRHLIAGEERMRVIWYPRGRGXXXXXXXXGEDEVWFEIVSVARGNGWVGRLLFPSTQRMQRHFFQEQLRGMQ 402          
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: A0A2P6VI37_9CHLO (DUF1990 domain-containing protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VI37_9CHLO)

HSP 1 Score: 74.7 bits (182), Expect = 6.320e-12
Identity = 70/238 (29.41%), Postives = 97/238 (40.76%), Query Frame = 0
Query:   70 AAPPRPPSGFQER-TV---RVRLGSGKRTYERGREALLRWRMHDGSSWARIKLGRRPKRSNSQLNMVTVAKACAGMTWCINPCLVLYEHKDTTLRFLAPPGTDPHHP-------LH--------SPNDTPTRTHGAKQEGWLWAGGSPTSAPRWASFLAGSKHKGKQSAVAYTTKEGHFIQGEERMRVLWFCGRGGDDSVWFEVYSVSRGAGFVGGVVFPFVQSMQRRFFREQAETMR 288
            AAPP P     E  TV   RV+LG G+  Y + +  L RW  H    WA +       ++  +     V  A     W  NP  + Y  +        PP   P  P       LH        SP+    R  G + E   WA     S     S  A    +G++ A A+TT  GH IQGEER  V W      DDSVW+E+Y++SR   ++     P ++  Q +F  +    M+
Sbjct:   41 AAPPLPADVEAEAWTVDHNRVKLGQGRAAYRKAQRLLQRWH-HFDLGWASV------NKAEMREGAPVVVTAKTLFAWSCNPLRISYVEERGLRGGQRPPWAPPPPPRAKGSTQLHTSCGGARESPSQGLARGGGGRAE---WAAAQERS-----SGAAAHLPRGRRYAFAHTTLAGHQIQGEERFAVAW---NHEDDSVWYEIYTLSRPGNWLTTATHPLLRLFQHKFAADSMAAMQ 260          
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: E1Z534_CHLVA (DUF1990 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z534_CHLVA)

HSP 1 Score: 66.6 bits (161), Expect = 4.730e-9
Identity = 60/222 (27.03%), Postives = 92/222 (41.44%), Query Frame = 0
Query:   85 RVRLGSGKRTYERGREALLRWRMHDGSSWARIKLGRRPKRSNSQLNMVTVAKACAGMTWCINPCLVLYEHKDTTLRFLA--PPGTDPHHPLHSPNDTPTRTHGAK-QEGWLWAGGSPTSAPRWASFLAGSKH---------------KGKQSAVAYTTKEGHFIQGEERMRVLWFCGRGGDDSVWFEVYSVSRGAGFVGGVVFPFVQSMQRRFFREQAETMR 288
            RV++G G+  Y R R  L +WR H    WA +     P +  S + +VT    C    W  NP  + +  +    R     PP              PT   GA  ++  L  GGS                               +G++ A A+TT +GH I+GEER  V W      DDSVW+E+Y++SR   ++     P +++ QR+F  +  + M+
Sbjct:   71 RVQVGRGQAAYRRARSLLEQWR-HFDLGWASVNAP--PVKPGSPV-VVTAFSLCC---WSCNPLRISFVEEGGLRRNAQQLPPWV---------GAPPTAAEGASLRQQRLHGGGSGVLGLLGTGXXXXXXXXXXXXXXXXXXXLPPRGRRFAFAHTTLQGHQIRGEERFCVAW---NAQDDSVWYEIYTLSRPGSWITAAAHPLLRAFQRKFAADSCDAMQ 273          
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: A0A6H5L025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L025_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 3.580e-7
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0
Query:   17 LLEAASMGTRVTFLQEPSAAYVKRYLEQQDDICASTNHQFAGFTAPTSADGDGAAPPRPPSGFQERT 83
            L E  S GT  TF +EPSA++V+RYLE+QD   +  NH FAGF+   +A            GFQERT
Sbjct:   14 LAEVISSGTTFTFFREPSASFVRRYLERQDTGQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT 80          
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: A0A2P6TVM3_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVM3_CHLSO)

HSP 1 Score: 59.3 bits (142), Expect = 1.660e-6
Identity = 28/75 (37.33%), Postives = 44/75 (58.67%), Query Frame = 0
Query:  214 KGKQSAVAYTTKEGHFIQGEERMRVLWFCGRGGDDSVWFEVYSVSRGAGFVGGVVFPFVQSMQRRFFREQAETMR 288
            +G++ A A+TT  GH I GEER  V W      DDSVW+E+Y++SR   ++     P +++ QR+F  +    M+
Sbjct:  219 RGRRYAFAHTTLAGHQISGEERFAVAW---NHEDDSVWYEIYTLSRPGSWITAATHPLLRAFQRKFAADSMAAMQ 290          
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: A0A8J9WMC4_9CHLO (Probable UPF0548 protein At2g17695 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WMC4_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 7.330e-6
Identity = 35/85 (41.18%), Postives = 45/85 (52.94%), Query Frame = 0
Query:  198 PTSAPRWASFLAGSKHKGKQSAVAYTTKEGHFIQGEERMRVLWFCGRGGDDSVWFEVYSVSRGAGFVGGVVFPFVQSMQRRFFRE 282
            P +A   AS       KG +     TT EGH + GEER  V W C    DDSVW+E+Y+VSR A  +    +P  +  QRRF +E
Sbjct:  128 PATALLKASRQPACTRKGMRYDFRQTTLEGHSLAGEERFSVQW-CKE--DDSVWYEIYAVSRPATILALASYPLTRYYQRRFRQE 209          
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: A0A5J4Y186_9CHLO (DUF1990 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y186_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 3.670e-5
Identity = 25/68 (36.76%), Postives = 43/68 (63.24%), Query Frame = 0
Query:  215 GKQSAVAYTTKEGHFIQGEERMRVLWFCGRGGDDSVWFEVYSVSRGAGFVGGVVFPFVQSMQRRFFRE 282
            G+Q   A++T  GH + GEER  V W      DDSVW+++Y+VSR A  +  + +P ++ +Q++F ++
Sbjct:   82 GQQLKYAHSTLHGHALAGEERFAVEWHKE---DDSVWYDIYTVSRPATPLAAISYPVIRLLQKQFQKD 146          
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Match: I0YZW6_COCSC (DUF1990 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZW6_COCSC)

HSP 1 Score: 54.3 bits (129), Expect = 4.400e-5
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 0
Query:  214 KGKQSAVAYTTKEGHFIQGEERMRVLWFCGRGGDDSVWFEVYSVSRGAGFVGGVVFPFVQSMQRRFFREQAETMRQIS 291
            +G +  +  TT EGH + GEER  V W      DDSVW+E+Y++SR A  +    +P  +  Q+RF RE    +++ +
Sbjct:  141 RGLRFDLGQTTLEGHSLAGEERFSVQWSKE---DDSVWYEIYAISRPATLLALASYPLTRYYQQRFRRESMAAVQRAA 215          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8316.16499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LQ57_ECTSI1.070e-11664.75DUF1990 domain-containing protein n=1 Tax=Ectocarp... [more]
W7TBY2_9STRA7.790e-2235.00DUF1990 domain-containing protein (Fragment) n=1 T... [more]
A0A4D9CTF5_9STRA3.510e-1536.09DUF1990 domain-containing protein n=1 Tax=Nannochl... [more]
A0A2P6VI37_9CHLO6.320e-1229.41DUF1990 domain-containing protein n=1 Tax=Micracti... [more]
E1Z534_CHLVA4.730e-927.03DUF1990 domain-containing protein n=1 Tax=Chlorell... [more]
A0A6H5L025_9PHAE3.580e-746.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6TVM3_CHLSO1.660e-637.33Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
A0A8J9WMC4_9CHLO7.330e-641.18Probable UPF0548 protein At2g17695 n=1 Tax=Coccomy... [more]
A0A5J4Y186_9CHLO3.670e-536.76DUF1990 domain-containing protein n=1 Tax=Trebouxi... [more]
I0YZW6_COCSC4.400e-535.90DUF1990 domain-containing protein n=1 Tax=Coccomyx... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018960Domain of unknown function DUF1990PFAMPF09348DUF1990coord: 75..283
e-value: 9.1E-20
score: 71.3
NoneNo IPR availablePANTHERPTHR34202:SF1UPF0548 PROTEINcoord: 226..287
coord: 33..115
NoneNo IPR availablePANTHERPTHR34202FAMILY NOT NAMEDcoord: 226..287
coord: 33..115
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..292
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.726

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8316contigS-dermatodea_contig8316:1950..7191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8316.16499.1mRNA_S-dermatodea_contig8316.16499.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8316 1851..7219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8316.16499.1 ID=prot_S-dermatodea_contig8316.16499.1|Name=mRNA_S-dermatodea_contig8316.16499.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=293bp
MLVHRVCLLPLGLLIVLLEAASMGTRVTFLQEPSAAYVKRYLEQQDDICA
STNHQFAGFTAPTSADGDGAAPPRPPSGFQERTVRVRLGSGKRTYERGRE
ALLRWRMHDGSSWARIKLGRRPKRSNSQLNMVTVAKACAGMTWCINPCLV
LYEHKDTTLRFLAPPGTDPHHPLHSPNDTPTRTHGAKQEGWLWAGGSPTS
APRWASFLAGSKHKGKQSAVAYTTKEGHFIQGEERMRVLWFCGRGGDDSV
WFEVYSVSRGAGFVGGVVFPFVQSMQRRFFREQAETMRQISS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018960DUF1990