prot_S-dermatodea_contig8310.16496.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8310.16496.1
Unique Nameprot_S-dermatodea_contig8310.16496.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length49
Homology
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: D8LFE0_ECTSI (DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE0_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 9.140e-24
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEKRPR 48
            YGAYLLACY+PDREEYQSVCKIGTGFTDEIL SFW ELKEHT+E+RPR
Sbjct:  894 YGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPR 941          
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: A0A068S0M9_9FUNG (DNA ligase n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S0M9_9FUNG)

HSP 1 Score: 75.9 bits (185), Expect = 7.820e-15
Identity = 30/48 (62.50%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEKRPR 48
            YG++LLACYDP+ EEYQ+VCK+GTGF+DE L  F+T+L EH I++  R
Sbjct:  582 YGSFLLACYDPETEEYQTVCKLGTGFSDENLQKFYTDLNEHKIQQPKR 629          
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: A0A836CMS0_9STRA (DNA ligase (ATP) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.820e-15
Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEKRP 47
            +GAYLLACY+PD EEYQSVCKIGTGF++E LL+    LK H IE++P
Sbjct:  500 FGAYLLACYEPDAEEYQSVCKIGTGFSNERLLALDAMLKAHVIERKP 546          
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: A0A8H8SIR2_9AGAM (DNA ligase n=3 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8SIR2_9AGAM)

HSP 1 Score: 75.5 bits (184), Expect = 1.070e-14
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEK 45
            YGA+LLACYDPD EEYQ++CKIGTGF+DE L + + +LK H I K
Sbjct:  664 YGAFLLACYDPDAEEYQTICKIGTGFSDEALAAHYAQLKPHEINK 708          
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: A0A8K0AK21_ANDGO (Mitochondrial ATP-dependent DNA ligase n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0AK21_ANDGO)

HSP 1 Score: 75.1 bits (183), Expect = 1.460e-14
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEKRP 47
            YGA+LLACYD DR+EYQS+CKIGTGF++E L  F   LKEH I  RP
Sbjct:  698 YGAFLLACYDSDRDEYQSICKIGTGFSEEDLQKFTDLLKEHVIPARP 744          
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: A0A1C7N288_9FUNG (DNA ligase n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N288_9FUNG)

HSP 1 Score: 75.1 bits (183), Expect = 1.460e-14
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEKRPR 48
            YGA+LLACYDP+ EEYQ++CKIGTGF+DE L  F+  LK H IE+  R
Sbjct:  588 YGAFLLACYDPETEEYQTICKIGTGFSDENLQLFYNTLKNHVIEQPKR 635          
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: K5XK36_AGABU (DNA ligase n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5XK36_AGABU)

HSP 1 Score: 74.7 bits (182), Expect = 1.990e-14
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEK 45
            YGA+LLAC+DPD EEYQ++CKIGTGF+DEIL S + ELK   +EK
Sbjct:  681 YGAFLLACFDPDSEEYQTICKIGTGFSDEILQSHYNELKPLELEK 725          
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: A0A8H7SSV5_9FUNG (DNA ligase n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SSV5_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 2.720e-14
Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEKRPR 48
            YGA+LLACYDPD EEYQ++CKIGTGF+DE L  F+  LK H I+   R
Sbjct:  537 YGAFLLACYDPDTEEYQTICKIGTGFSDENLQLFYNTLKTHVIDAPKR 584          
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: A0A1X2GRM5_9FUNG (DNA ligase (Fragment) n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GRM5_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 2.720e-14
Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEKRPR 48
            YG +LLACYDPD EEYQS+CKIGTGF++E+L +    LKEH I K  R
Sbjct:  516 YGTFLLACYDPDTEEYQSICKIGTGFSEEMLQTIHQRLKEHIIPKPKR 563          
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Match: A0A261Y452_9FUNG (DNA ligase n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y452_9FUNG)

HSP 1 Score: 73.9 bits (180), Expect = 3.720e-14
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIE 44
            YGAYLLACYDPDREEYQ++ KIGTGF+DE L + +T  K+H I+
Sbjct:  612 YGAYLLACYDPDREEYQTITKIGTGFSDEALSTHYTFFKDHVID 655          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8310.16496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE0_ECTSI9.140e-2489.58DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A068S0M9_9FUNG7.820e-1562.50DNA ligase n=2 Tax=Lichtheimia TaxID=688353 RepID=... [more]
A0A836CMS0_9STRA7.820e-1568.09DNA ligase (ATP) n=1 Tax=Tribonema minus TaxID=303... [more]
A0A8H8SIR2_9AGAM1.070e-1466.67DNA ligase n=3 Tax=Ceratobasidium sp. AG-Ba TaxID=... [more]
A0A8K0AK21_ANDGO1.460e-1468.09Mitochondrial ATP-dependent DNA ligase n=1 Tax=And... [more]
A0A1C7N288_9FUNG1.460e-1464.58DNA ligase n=1 Tax=Choanephora cucurbitarum TaxID=... [more]
K5XK36_AGABU1.990e-1468.89DNA ligase n=3 Tax=Agaricus bisporus TaxID=5341 Re... [more]
A0A8H7SSV5_9FUNG2.720e-1464.58DNA ligase n=1 Tax=Thamnidium elegans TaxID=101142... [more]
A0A1X2GRM5_9FUNG2.720e-1464.58DNA ligase (Fragment) n=1 Tax=Hesseltinella vesicu... [more]
A0A261Y452_9FUNG3.720e-1468.18DNA ligase n=1 Tax=Bifiguratus adelaidae TaxID=193... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 1..48
e-value: 1.9E-13
score: 52.7
NoneNo IPR availablePANTHERPTHR45674:SF4DNA LIGASE 1coord: 1..46
NoneNo IPR availablePANTHERPTHR45674FAMILY NOT NAMEDcoord: 1..46
IPR012309DNA ligase, ATP-dependent, C-terminalPFAMPF04679DNA_ligase_A_Ccoord: 1..47
e-value: 3.8E-9
score: 37.0
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8310contigS-dermatodea_contig8310:8958..9104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8310.16496.1mRNA_S-dermatodea_contig8310.16496.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8310 8958..9104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8310.16496.1 ID=prot_S-dermatodea_contig8310.16496.1|Name=mRNA_S-dermatodea_contig8310.16496.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=49bp
YGAYLLACYDPDREEYQSVCKIGTGFTDEILLSFWTELKEHTIEKRPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012309DNA_ligase_ATP-dep_C
IPR012340NA-bd_OB-fold