mRNA_S-dermatodea_contig8289.16477.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8289.16477.1
Unique NamemRNA_S-dermatodea_contig8289.16477.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: D8LDH7_ECTSI (YihA6, YihA/EngB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH7_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 1.510e-94
Identity = 154/181 (85.08%), Postives = 168/181 (92.82%), Query Frame = 2 
Query:    2 TTLPEIAFLGRSNVGKSSMLNTLFGEAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIWAYIRQASAA 544
            T LPEIAFLGRSNVGKSSMLNTLFGE VAKVSKTPGRTR+INIFKAKN   KDVCYFADLPGYGYAKMSKD QR IEKFL MYLERR NLKLLILL DSRR+PL SDAG+LEYA+D+ DR ++ILLVATKVDKLNTMESVVNIKRLQEA++LPPGLPVSFS++TG+GKKEIW+YIRQA+AA
Sbjct:  280 TNLPEIAFLGRSNVGKSSMLNTLFGEPVAKVSKTPGRTRKINIFKAKNGNDKDVCYFADLPGYGYAKMSKDKQRTIEKFLGMYLERRSNLKLLILLADSRREPLASDAGVLEYAEDKEDRLYKILLVATKVDKLNTMESVVNIKRLQEAFELPPGLPVSFSAITGQGKKEIWSYIRQAAAA 460
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BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: A0A836CAC1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC1_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.050e-61
Identity = 111/182 (60.99%), Postives = 141/182 (77.47%), Query Frame = 2 
Query:    8 LPEIAFLGRSNVGKSSMLNTLFGEAVAKV----SKTPGRTRQINIFKAKNSKG--KDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIWAYIRQA 535
            +PE+AFLGRSNVGKSSMLN LFGE  AKV    SKTPGRT+ INIF A+   G  +++C FADLPGYGYAK++K+  R IE FL  YLERR  LKLLILLVD+RRD L SDA IL++A D     F++L+VATKVDKL+ ME+ +N+ R+++ + LP  LP+ FS+VTG+G+KE+W YIR+A
Sbjct:   19 VPEVAFLGRSNVGKSSMLNCLFGERAAKVRFVVSKTPGRTQLINIFSARGGAGGARELCRFADLPGYGYAKLAKEDMRAIEGFLMQYLERRAQLKLLILLVDARRDALDSDAEILDFAADM-GVGFRVLVVATKVDKLSAMEAALNLARIRDGFGLPEELPLPFSAVTGQGRKEVWQYIREA 199
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BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: A0A7S4HFM9_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HFM9_9EUKA)

HSP 1 Score: 159 bits (401), Expect = 1.310e-41
Identity = 87/180 (48.33%), Postives = 119/180 (66.11%), Query Frame = 2 
Query:    8 LPEIAFLGRSNVGKSSMLNTLFG--EAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIWAYIRQASA 541
            LPEI   GRSNVGKSS LNTL G  + VA VSK+PGRTR +N+F+     GK VC   DLPGYGYAK++++MQ    K +E YL +R+ LKL IL VD +R+P   DA +L++         + L+V TKVDKL   +   +++RL+E+ +LP G P++FSS TG G+ E+W +I+   A
Sbjct:   18 LPEICLAGRSNVGKSSALNTLSGRRKKVAVVSKSPGRTRSLNLFRV----GK-VCCLTDLPGYGYAKVNREMQDQWRKSIEAYLTKREQLKLAILFVDLQREPQEQDAQLLDFLSYY---DMETLVVGTKVDKLKANDKRTSVERLRESLELPDGQPIAFSSATGDGRSEVWRHIQDVCA 189
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BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: A0A0M0K3H5_9EUKA (Ribosome biogenesis gtp-binding protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3H5_9EUKA)

HSP 1 Score: 154 bits (390), Expect = 4.150e-40
Identity = 86/178 (48.31%), Postives = 114/178 (64.04%), Query Frame = 2 
Query:    8 LPEIAFLGRSNVGKSSMLNTLFG---EAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIWAYIRQ 532
            LPE    GRSNVGKSS LNTL G   + +AKVSKTPG TR IN+++  N     VC   DLPGYGYAK+SK+MQ    K +E Y+ RR+ LKL +L VD++RDP  SDA +L++ +         L+VATK DKL       +++ L+E+  LP   P++ SSVTG GK+E+W  I +
Sbjct:    6 LPEFTLAGRSNVGKSSALNTLAGRPNKKIAKVSKTPGSTRLINLYRLGN-----VCTITDLPGYGYAKVSKEMQDDWRKQIEAYMRRREELKLAVLFVDAQRDPQESDAQLLDFLEAEAK---STLVVATKADKLAKQALQSSLEYLRESLALPSDQPIALSSVTGLGKREVWGAINE 175
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BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: A0A4D9CYN5_9STRA (EngB-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYN5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 6.920e-40
Identity = 89/178 (50.00%), Postives = 117/178 (65.73%), Query Frame = 2 
Query:    8 LPEIAFLGRSNVGKSSMLNTLFG--EAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIWAYIRQA 535
            LPE+A  GRSNVGKSS+LN L G  + VA VSKTPGRT+QIN+FK  +S G  V    DLPGYGYAK+ K +Q  I   +  YL  R  L+L +LL+D+RR+P  SD  +++Y +        +L++ATKVDKL   +   N+ RL + + LP G+PV+FSSVTG  K+ IW  IR A
Sbjct:   87 LPEVAVFGRSNVGKSSLLNCLAGINKKVAVVSKTPGRTQQINLFKVHDSNG-PVSVLVDLPGYGYAKLPKALQSDIGAQVRRYLSDRPTLRLAVLLMDARREPQKSDLNMMKYFRAA---NVPLLVLATKVDKLKHEDMEENLGRLHQYFKLPVGMPVAFSSVTGVNKRAIWNAIRDA 260
[Close]
BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: A0A5M8SMD6_9BACT (Probable GTP-binding protein EngB n=1 Tax=Acidobacteria bacterium AB60 TaxID=1230846 RepID=A0A5M8SMD6_9BACT)

HSP 1 Score: 153 bits (386), Expect = 2.170e-39
Identity = 89/179 (49.72%), Postives = 114/179 (63.69%), Query Frame = 2 
Query:    5 TLPEIAFLGRSNVGKSSMLNTLFGEAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIWAYIRQASA 541
            ++PEIAFLGRSNVGKSS+LN L GE  AKVS TPGRTR IN F   + K +    FADLPGYG+AK+SK +     KF+E YL+ R  L L + LVDS   P P DA +L++ +   DR F  L+VATK+D+L+  E   N+  L++       LPVS  + TG G KE+W  I +A A
Sbjct:   22 SVPEIAFLGRSNVGKSSLLNALAGEKAAKVSSTPGRTRTINFFLLSDEKQRPRVMFADLPGYGFAKISKSISAEWPKFIEPYLQDRPTLSLCVCLVDSNVPPQPRDAQLLDWLRSV-DRAF--LVVATKIDRLSGNERTRNLAALKKGLGTDDILPVS--AKTGAGLKELWGRIEEAGA 195
[Close]
BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: A0A7S0LL08_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LL08_9EUKA)

HSP 1 Score: 153 bits (387), Expect = 2.370e-39
Identity = 84/177 (47.46%), Postives = 113/177 (63.84%), Query Frame = 2 
Query:    8 LPEIAFLGRSNVGKSSMLNTLFG--EAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIWAYIRQ 532
            LPEI   GRSNVGKSS LN L G  +  AKVSKTPGRTR IN+FK     GK  C   DLPGYG+AK+S++MQ    + +E Y   R+ L+L +L VD++R+P  SD  +LE+           ++VATK DKL+      ++++L E +DLP G P+ FSS TG G +E+W Y++Q
Sbjct:   39 LPEITLAGRSNVGKSSALNALSGRRKKAAKVSKTPGRTRLINLFKV----GK-ACAITDLPGYGFAKVSREMQDDWRRSIEAYFRNREQLRLAVLFVDAQREPQESDGQLLEFLLYN---ELPTVVVATKADKLSQTRLKASLRQLSEEFDLPEGQPIPFSSQTGAGVRELWQYLQQ 207
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BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: UPI000D69A2CF (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Occallatibacter savannae TaxID=1002691 RepID=UPI000D69A2CF)

HSP 1 Score: 152 bits (384), Expect = 3.580e-39
Identity = 86/171 (50.29%), Postives = 111/171 (64.91%), Query Frame = 2 
Query:    5 TLPEIAFLGRSNVGKSSMLNTLFGEAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIW 517
            ++PEIAFLGRSNVGKSS+LN L GE  AKVS TPGRTR IN F+  + KG+     ADLPGYGYAK+SK +     KF+E YL  R+ LKL + LVDS   P  SD  +LE+ +   +R F  L+VATK D+L+  E   N+  ++  +D+   LPVS  + T  G KE+W
Sbjct:   21 SVPEIAFLGRSNVGKSSLLNALVGEKAAKVSSTPGRTRAINFFQLVDDKGRPQVVLADLPGYGYAKISKSISAEWPKFIEPYLAERETLKLCVCLVDSNIPPQQSDGKLLEWLR-HVERDF--LVVATKTDRLSGNERTKNLSAIKREFDIDEVLPVS--AKTNAGIKELW 186
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BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: W7U6M2_9STRA (Ribosome biogenesis gtp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6M2_9STRA)

HSP 1 Score: 158 bits (399), Expect = 4.580e-39
Identity = 88/178 (49.44%), Postives = 118/178 (66.29%), Query Frame = 2 
Query:    8 LPEIAFLGRSNVGKSSMLNTLFG--EAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIWAYIRQA 535
            LPE+A  GRSNVGKSS+LN L G  + VA VSKTPGRT+QIN+FK  +S G  V    DLPGYGYAK+ K +Q  I   +  YL  R  L+L +LL+D+RR+P  SD  +++Y +        +L++ATKVDKL   +   N+ RL + + LP G+PV+FSSVTG  K+ +W+ IR A
Sbjct:  193 LPEVAVFGRSNVGKSSLLNCLAGINKKVAVVSKTPGRTQQINLFKVHDSNG-PVSVLVDLPGYGYAKLPKALQSDIGAQVRRYLSDRPTLRLAVLLMDARREPQKSDLNMMKYFRAA---NIPLLVLATKVDKLKHEDIEENLGRLHQYFKLPVGMPVAFSSVTGVNKRAVWSAIRDA 366
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BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Match: A0A7S3U5N2_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U5N2_9SPIT)

HSP 1 Score: 148 bits (374), Expect = 3.890e-37
Identity = 86/184 (46.74%), Postives = 115/184 (62.50%), Query Frame = 2 
Query:    2 TTLPEIAFLGRSNVGKSSMLNTLFG--EAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKMSKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRPDRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGKKEIWAYIRQASAAG 547
            +TLPEI  +GRSNVGKSS LN L G  + VA+VSKTPGRTR IN+F    S GK  C   DLPGYG+AK+S +MQ    K +E YL  R NL+  ++ +DS+R+P   DA IL++           L+VATKVDKL + +    +  L++   L P  P+ FSSVT  G+KE+W Y+ +   +G
Sbjct:   66 STLPEITLVGRSNVGKSSALNCLSGRRKKVAQVSKTPGRTRLINLF----SVGK-ACMITDLPGYGFAKVSVEMQEEWRKNVEKYLRLRDNLRAAVVFIDSQREPQQVDAQILDFLMYN---EIPALVVATKVDKLKSSQLQPCMAALRKGLQLSPDQPIPFSSVTDTGRKEVWNYLEEMCTSG 241
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8289.16477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDH7_ECTSI1.510e-9485.08YihA6, YihA/EngB-like GTPase n=1 Tax=Ectocarpus si... [more]
A0A836CAC1_9STRA2.050e-6160.99P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4HFM9_9EUKA1.310e-4148.33Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A0M0K3H5_9EUKA4.150e-4048.31Ribosome biogenesis gtp-binding protein n=1 Tax=Ch... [more]
A0A4D9CYN5_9STRA6.920e-4050.00EngB-type G domain-containing protein n=1 Tax=Nann... [more]
A0A5M8SMD6_9BACT2.170e-3949.72Probable GTP-binding protein EngB n=1 Tax=Acidobac... [more]
A0A7S0LL08_9EUKA2.370e-3947.46Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
UPI000D69A2CF3.580e-3950.29ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]
W7U6M2_9STRA4.580e-3949.44Ribosome biogenesis gtp-binding protein n=1 Tax=Na... [more]
A0A7S3U5N2_9SPIT3.890e-3746.74Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8289contigS-dermatodea_contig8289:3205..8301 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score278.5
Seed ortholog evalue2e-72
Seed eggNOG ortholog2880.D8LDH7
KEGG koko:K03978
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363
EggNOG free text desc.GTP binding
EggNOG OGsCOG0218@1,KOG2486@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons4
Model size1907
Cds size495
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8289.16477.1prot_S-dermatodea_contig8289.16477.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8289 3260..6944 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925333.763203-UTR-S-dermatodea_contig8289:3204..32591622925333.763203-UTR-S-dermatodea_contig8289:3204..3259Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8289 3205..3259 +
1694079862.410859-UTR-S-dermatodea_contig8289:3204..32591694079862.410859-UTR-S-dermatodea_contig8289:3204..3259Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8289 3205..3259 +
1622925333.8236418-UTR-S-dermatodea_contig8289:6944..83011622925333.8236418-UTR-S-dermatodea_contig8289:6944..8301Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8289 6945..8301 +
1694079862.4761622-UTR-S-dermatodea_contig8289:6944..83011694079862.4761622-UTR-S-dermatodea_contig8289:6944..8301Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8289 6945..8301 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925333.7733681-CDS-S-dermatodea_contig8289:3259..33401622925333.7733681-CDS-S-dermatodea_contig8289:3259..3340Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8289 3260..3340 +
1694079862.4229853-CDS-S-dermatodea_contig8289:3259..33401694079862.4229853-CDS-S-dermatodea_contig8289:3259..3340Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8289 3260..3340 +
1622925333.7836936-CDS-S-dermatodea_contig8289:4101..41971622925333.7836936-CDS-S-dermatodea_contig8289:4101..4197Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8289 4102..4197 +
1694079862.4322011-CDS-S-dermatodea_contig8289:4101..41971694079862.4322011-CDS-S-dermatodea_contig8289:4101..4197Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8289 4102..4197 +
1622925333.8006058-CDS-S-dermatodea_contig8289:5214..53731622925333.8006058-CDS-S-dermatodea_contig8289:5214..5373Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8289 5215..5373 +
1694079862.451599-CDS-S-dermatodea_contig8289:5214..53731694079862.451599-CDS-S-dermatodea_contig8289:5214..5373Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8289 5215..5373 +
1622925333.8131657-CDS-S-dermatodea_contig8289:6785..69441622925333.8131657-CDS-S-dermatodea_contig8289:6785..6944Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8289 6786..6944 +
1694079862.4639509-CDS-S-dermatodea_contig8289:6785..69441694079862.4639509-CDS-S-dermatodea_contig8289:6785..6944Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8289 6786..6944 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8289.16477.1

>prot_S-dermatodea_contig8289.16477.1 ID=prot_S-dermatodea_contig8289.16477.1|Name=mRNA_S-dermatodea_contig8289.16477.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=165bp
MLNTLFGEAVAKVSKTPGRTRQINIFKAKNSKGKDVCYFADLPGYGYAKM
SKDMQRGIEKFLEMYLERRKNLKLLILLVDSRRDPLPSDAGILEYAQDRP
DRPFQILLVATKVDKLNTMESVVNIKRLQEAYDLPPGLPVSFSSVTGKGK
KEIWAYIRQASAAG*
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mRNA from alignment at S-dermatodea_contig8289:3205..8301+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8289.16477.1 ID=mRNA_S-dermatodea_contig8289.16477.1|Name=mRNA_S-dermatodea_contig8289.16477.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5097bp|location=Sequence derived from alignment at S-dermatodea_contig8289:3205..8301+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GACGACGCTCCCCGAGATTGCATTCCTGGGTCGTTCTAACGTGGGTAAGA
GCAGCATGCTCAACACCCTCTTCGGCGAGGCCGTCGCCAAGGTTTCCAAG
ACTCCCGGGCGCACGCGACAGATCAACATCTTCAAGGTGATCGCACTTTG
TGGGGTCGTCGGTGTGTAATGCAGGGTGACGACGTTTGTGGAAGCAGATC
CTCATCAGAAGTTGCATACATATATATAAAGCAGTAGTATGTATACTATT
AATAGTAGGTAGCCGCGGCTACGCCCGTGAGGTAAAAAATCCTACTCGTG
GTCGCTCGACTCCAAAATCAAGTTGTTTGGCGCTCACCACAAACATCGAG
TTGTTCGGCCTCACTTTTTGGTTGGCATAAATCGTAAGAGGATTCGTGTG
GCTGAAATCAACTCTAAAATCGCTATTAAAAATCTGTATAAAGAGCGGTA
TTTAATTAATAAAGATGTGTGTATGTACTGTATGTATTATGCATGAAATC
GTAAGTGGAGGCAACCGCAATCGTGATGGATGATGGCGAAAGTGCCTGGC
CGAGAGTCGTTGTACTGTATAACATGTACGTATACGAAAATGCCCAGGAC
ACGGCTTGTTTGCAAGGTTAACGACAGGGGGCCCTGTTTGTTTTGGTGGC
TCGCATGGAAGACAAGATAGCGCCTGAACTTTCGCGGGTTGTTCTTCTGG
TGAGGGCCGCCGGGCAGTATTGGCAGTACGTAGGCGCTTATCACATGTTT
TTTTGCTAGCGTATCGGTCATCGCATATCGCAGAGACGTGCATTCCCGTT
TTGTTTTTGTTCCCGCCGGTCACGCCTACCGAATTAAGTCTTCCTCGATT
TGCCTTTTGCTCCCCCCTCCGTTCCTTGGCGGTGTTGCGTCGAACAGGCC
AAGAACAGCAAGGGCAAGGACGTTTGCTACTTTGCCGACCTCCCGGGCTA
CGGGTACGCTAAGATGTCCAAGGACATGCAGCGCGGCATCGAGGTCGGTA
CTGCGGCGGTAGCACTCGCCTTCCTGCAGCTTTTTGACGCGTGCGGTGCA
ACATCACAGACAGGCTTTTTTTTTAAATATATTTACTGACCGATCGGCGA
AACAAAAACAGGTTGTGCATGTAGCAGCCCCACGAGCCATTCCCTGTTGC
TGCTGCTGCAACGATCGGCAGCAGCCAGGGCATTACCAGAGCGCGGCAAT
ATATATATATATATATATATATATATATATCGCCTACCGTGGCGCCTTTG
TTGCGTTGGATGTTGATAACACATTCGATAGACGGGGTCCGTCTGTGATC
ACCAGGGATCATCAGATCTCTCCCGGATTCTTACCTTAACTTTTTATCGC
GCATTGGGTTTGGCACTCCCTCAGCTCCCCGATTGCTCTTTTTTTTTTTT
ACGTTTTCGCGCTCTCGCGAAAGCTTTCCGCGGCGGAGGTGAGAGACAAT
AAATCAATATCGACCCTGCCCGGATTCGAACTCGGGTCCTCCGCCTTCCT
GGGCGCTGGTCTACCAGTTCAACCACGGATGCTATAAGATAATATCCAAC
CCAACCCACTGATACGTGCGGTAATAATTCTTCTTCAGGGTTGGTATAGT
CTCCAGCCAGAGTACTAAGAAACCTGTGGACGCGAACGCTGCTGCTGCGC
TCGCGTCAGATTTATCGCGTTCCGCTGGTTTTGTCTCCCGTCAGGGTAGC
AGAGCCACGATCACTCAGCGTTTGCCAGCGCATGTGCATTGGATGGGCAC
CCAAAGTAGTCAATCCACATTTTAAATAGTGCATTGTCCATCCGGTGTGC
ATCGAGGATGTACATCGGATGGACGCCCCAGGTTGACCTTACCACGGGTG
GTGCGTGCGCCAGCAGCAAAAAAAGCGACTGCTTCACCGGCCTTCAACCG
GTCGACCGTATAGTACGTACGTATACAAGTATACTGTAATCAAACAATAT
AATACAAGTCAGTATTTCATTGTGCCACTTTTTGCCGAAAACCGCGTCCC
CTGTTGACAGAAATTTCTTGAGATGTACCTGGAGCGTCGAAAGAACTTGA
AGCTCCTGATTTTGCTGGTCGATTCGCGGAGAGATCCCCTACCGTCCGAT
GCTGGTATTTTGGAGTACGCGCAGGACAGGCCTGATCGCCCGTTCCAGAT
TCTCCTCGTGGCCACCAAGGTGAGGCATGTGTGTGCGGACGGGGGCTAGC
GAAGCGATAAAAAAGACAGGATTTCGGATTTACTGACTTGTGCTTATCGA
AGTGGATTTATGTGCCCCCCGAAACCGCGCAAAGCCAACCGGATTTATTG
CTGTGCTCATCGAAGTAGATTTATGACCCCCCCCCCAGTGGCGACACCAT
ATAATAAAGCAACTCGTTCGAGGCTGCCATCCATGTGCAAGATTAAGCAG
TACGGTCTATAATAGGCCGAACACTCTTAGCTCTTAGCAGGATGCAGCTC
ACCCTTCATGCGACTCGCCGAACACATCACGGCGCTCCGCGCTTGGTGAA
TGCGAGCCTGGTCCGGCGAAAACCCGGCGTGCTCCGTCCCGGCTTTGTCG
GGATGCGAGGTCTATGGTCTAACAACTACGGCATGCATAACATTGAGTAC
ACCCCCCACCCTCCTCCACCTTGGTTGCGATTGCTAGCTGAGGAAATCGT
GCCATAAAAACCGGTCAAATACTAATACTCGAAGGAAACACCCCGGGCCG
CATCTAAAAAGGAGCCTTGAGAAGTACTGACTGTCTGTACACATGAATGT
GGGACGACTACTAATAGTGTTGAAATGGAGCTTGCTGGTTGGTACATGCG
TATCGTGCCGGCTTCCAAAGGGACCAAAACACCATGCTCTCTACAGCTAC
AGGAAACAAAGCAGCTCAGCTCACACTGCAAGTGTATAGTATCAGTTTTC
AGTTTTCAACTTTCCTATCATATCTGAAGCCGTCTTTGGAGGAGACAGCG
TCCGTGCCCGCACGCTACCAACTCACTTCCTTGGAAAGCACGTTTTTTTT
TTCTTCAATTATCAAGTTCGTGCGGCATGCGTATGCTTGTGTCATACATG
TAAACGAAAGTATCCTATTCACAAAGATACGTGTCGATGGGGGTAGCGAT
TCTGACTGTTTTTGTTCGCTTTTTTATTTGGCGCACATATTATATGACTT
GCTTTTCCGAGGTCCGTCTGTGGTCACGAGGGATTGATCATCCCATCTCT
CTTATCCCCGGTTCTCACATTTGATTTTTATCGCGAATGCATCGGGTTCG
GCACTCCCGCAGCCCGCAGCTCGCCGATTTCTCAGATTTTGGTTCGCTCA
CGGTTTCGCGCTTTCCGCGGCGGAGGTAGAACAAGTAAAGAAATATCGAC
TCTGCCGGACTGTAGCTTTGGAAAAATACCATGTACAACTAACAATTTTT
ATCGAGGGTTATTTTCCCAAAGGACTATCATACTTCTACTGACTCTAGCG
CATTACGCCCCATTTACGCTTATGCGCATCTGACCACAAGCCGATCGCCT
GTACGTGTGCAAATGAGTCACTCAAATCAAACTCTTCTACGTGTGCAAAT
CAATCAATCAAAACTGCCCCCCGTCTGACAGGTGGATAAGCTCAACACAA
TGGAATCGGTTGTGAACATCAAGCGGTTGCAAGAGGCATACGACCTGCCC
CCTGGGCTCCCGGTTTCGTTCTCATCCGTCACCGGGAAGGGCAAAAAGGA
GATATGGGCGTATATTCGACAGGCGTCGGCAGCGGGGTAGACGAAGGCCG
TCTCTCTGCAGTATCCTTTTTAGTTAATTCAAGGAACAATTTTACGTTTT
TTTTAACAGCGATTTAGACTTGATTCTTCTGGACAACAATAACTGCGATT
TAGAGTTGAGGCGGTGAAACATCTGCGAAGCAAAGAGTAGGAGTTTTGCA
CCTCACGGGCGTACCTTGCCCGTGATTGTGATTGGTGACTACTGTACCTA
CGCTATTACAGTAATATTCATATAAAATAGTAAAATATTGTAAAATATTG
GGTTTGGCACGAGCAACGGTACATATGATCGCAACAACATGATTTTATTA
TAGTACAACTGCAGTAAATCGTAATTCGTCGCCCAGCGGTGTTGCTTGAG
CGGGACACCCATATCAGATGTCATATACTTGTACTTGTATATGATCTACG
ACACGACGGGTGCGCTCCAAAACATGGCTCCCGTCGAGTCACCCTCGGTG
ACTCGCGAGGCTAGTCCAAGAAGTTCGAACGTCTGTCAGAGATTCGTTGG
CTTGCATTTTTTTCTGGTGTTTTCTTGTTAAATATACCTTGGTTCTTTCG
GCATAACATACTTATCCATACTTGTACGTGTCTTTCTCCAGATTTGTGGA
GGCCGGGAAAAATAGAAGCGCGATGGATCCCGCTTCATCGTTCCGGCTCT
TTGGCTTTGGTCGGGGCGGCGGACTGGGGCGTGTTGAATCCAGGCCTTTT
ATTTCTTGGTATTGCATTAGAGCTCTAGGCTCCAGTAGTGCGGCGAACCG
TCCGAAATCTCACACACAGTACACATGTTCATACAATACTTCTGTAATAC
TTGTAGCTTCGGGGCTTTCAATTATTGTTTCTGCCTTGCTATGATACCGT
ATGTTGCAAACTTTAATGGAGAAATGGGAAGACAGGTCCACGAGCAGGAG
TGGATACAGTACCATACCCCTGTGTGTAGGTATGATGTATGATGGGTGCT
GGAGGAACCCGGAAACTTCCGTCGAATAAGAACGTACCTGGTAGTAAATA
CGTTGGTATCACCTCATGTACACTACATACAGTAGTCACAGAGTCGTAGA
GTGCGTAGTTACGATACAATAAACTCGTAGCTGGGGTGGATGTGGCAGCA
CTTGATTCGCCTATGATACTCTGCGTGTACATTTGACATTATTGATACCT
CGAGTTGTTGTAATGGAGCAGCTGCGTATGTATGTACAAGTATGTATATT
ATAGGTAACTAAATGGATAGCTCCAGGATCCTCTCAGCCACGTCGCTCCT
CTCTCTTGAAATCCAATCACAGTGAGTCATCAGTTTACTAATAGTTGGAC
TTTCATCTTGCTGTACACTAGTAGCTACCTGCCATCATGATATAAGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig8289:3205..8301+

>mRNA_S-dermatodea_contig8289.16477.1 ID=mRNA_S-dermatodea_contig8289.16477.1|Name=mRNA_S-dermatodea_contig8289.16477.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at S-dermatodea_contig8289:3205..8301+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCTCAACACCCTCTTCGGCGAGGCCGTCGCCAAGGTTTCCAAGACTCC
CGGGCGCACGCGACAGATCAACATCTTCAAGATGCTCAACACCCTCTTCG
GCGAGGCCGTCGCCAAGGTTTCCAAGACTCCCGGGCGCACGCGACAGATC
AACATCTTCAAGGCCAAGAACAGCAAGGGCAAGGACGTTTGCTACTTTGC
CGACCTCCCGGGCTACGGGTACGCTAAGATGTCCAAGGACATGCAGCGCG
GCATCGAGGCCAAGAACAGCAAGGGCAAGGACGTTTGCTACTTTGCCGAC
CTCCCGGGCTACGGGTACGCTAAGATGTCCAAGGACATGCAGCGCGGCAT
CGAGAAATTTCTTGAGATGTACCTGGAGCGTCGAAAGAACTTGAAGCTCC
TGATTTTGCTGGTCGATTCGCGGAGAGATCCCCTACCGTCCGATGCTGGT
ATTTTGGAGTACGCGCAGGACAGGCCTGATCGCCCGTTCCAGATTCTCCT
CGTGGCCACCAAGAAATTTCTTGAGATGTACCTGGAGCGTCGAAAGAACT
TGAAGCTCCTGATTTTGCTGGTCGATTCGCGGAGAGATCCCCTACCGTCC
GATGCTGGTATTTTGGAGTACGCGCAGGACAGGCCTGATCGCCCGTTCCA
GATTCTCCTCGTGGCCACCAAGGTGGATAAGCTCAACACAATGGAATCGG
TTGTGAACATCAAGCGGTTGCAAGAGGCATACGACCTGCCCCCTGGGCTC
CCGGTTTCGTTCTCATCCGTCACCGGGAAGGGCAAAAAGGAGATATGGGC
GTATATTCGACAGGCGTCGGCAGCGGGGTAGGTGGATAAGCTCAACACAA
TGGAATCGGTTGTGAACATCAAGCGGTTGCAAGAGGCATACGACCTGCCC
CCTGGGCTCCCGGTTTCGTTCTCATCCGTCACCGGGAAGGGCAAAAAGGA
GATATGGGCGTATATTCGACAGGCGTCGGCAGCGGGGTAG
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