prot_S-dermatodea_contig824.16434.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig824.16434.1
Unique Name	prot_S-dermatodea_contig824.16434.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	210

Homology

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BLAST of mRNA_S-dermatodea_contig824.16434.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.570e-5
Identity = 35/66 (53.03%), Postives = 41/66 (62.12%), Query Frame = 0

Query:    2 IGLSGDSGKVEAEVPDVDVSAEXXXXXXXXXXXXXXLDVKKPKKSLFGGISFKKPSSKAKMEVPDV 67
            +GLSGD  K +AE+P  DV A               +DVKKPKK LFGG+SFKKPS K K +VPDV
Sbjct: 2534 VGLSGD--KPDAELPSGDVDASVSVPDVPS------VDVKKPKKGLFGGLSFKKPSLKGKAKVPDV 2591

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BLAST of mRNA_S-dermatodea_contig824.16434.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 3.840e-5
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0

Query:    2 IGLSGDSGKVEAEVPDVDVSAEXXXXXXXXXXXXXXLDVKKPKKSLFGGISFKKPSSKAKMEVPDV 67
            +GLSGD  K +AE+P  DV A               +DVKKPK+ LFGG+SFKKPS K K +VPDV
Sbjct: 2895 VGLSGD--KPDAELPSGDVDANVSVPDVPS------VDVKKPKRGLFGGLSFKKPSFKGKAKVPDV 2952

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig824.16434.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig824.16434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LB94_ECTSI	1.570e-5	53.03	Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ...	[more]
A0A6H5K9M1_9PHAE	3.840e-5	51.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23348	PERIAXIN/AHNAK	coord: 11..208

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig824	contig	S-dermatodea_contig824:2037..9053 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig824.16434.1	mRNA_S-dermatodea_contig824.16434.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig824 2037..9053 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig824.16434.1 ID=prot_S-dermatodea_contig824.16434.1|Name=mRNA_S-dermatodea_contig824.16434.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=210bp
GIGLSGDSGKVEAEVPDVDVSAEAPSGSAEASLPTGELDVKKPKKSLFGG
ISFKKPSSKAKMEVPDVSAPEVAAAVAEVAVPSVDPSIPGVEGGLKGPDV
SADMPSVGAAEGSLPTGDMDLSTPSAELKKPKKGRFGSLFKAGSFKGKME
APAVDAAGDVPSVDVPSVDVQSVGASVDAPAVDVAVAVDAPTASLELPGG
MKAPSVDLAG