mRNA_S-dermatodea_contig82389.16431.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig82389.16431.1
Unique NamemRNA_S-dermatodea_contig82389.16431.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: D7G191_ECTSI (Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G191_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 8.340e-23
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 1 
Query:   10 PLVVTSCALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWYR 165
            PLVV   ALLLRCMVSLWPYSG+ E+P++GDYEAQRHWME+T ALPLHQWYR
Sbjct:   18 PLVVVWFALLLRCMVSLWPYSGQGERPMYGDYEAQRHWMEITNALPLHQWYR 69
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: A0A1X2J1D5_9FUNG (Alpha-1,3-glucosyltransferase n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2J1D5_9FUNG)

HSP 1 Score: 82.0 bits (201), Expect = 6.980e-17
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 1 
Query:    1 WTHPLVVTSCALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWYR 165
            WT PL+V S A L+R  V+L PYSG    PI+GDYEAQRHWME+TT LPL+QWYR
Sbjct:   26 WTAPLLVLSFATLIRFAVALNPYSGYNTPPIYGDYEAQRHWMEITTHLPLNQWYR 80
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: A0A2R5LPK4_9ACAR (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LPK4_9ACAR)

HSP 1 Score: 73.2 bits (178), Expect = 6.810e-15
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 1 
Query:   31 ALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWYR 165
            ALLLR   SL+PYSG  +QP+ GDYEAQRHWME+T  LP+H+WY+
Sbjct:   18 ALLLRWGTSLYPYSGAGKQPMFGDYEAQRHWMEITANLPVHEWYK 62
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: V5GV03_ANOGL (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5GV03_ANOGL)

HSP 1 Score: 74.7 bits (182), Expect = 1.470e-14
Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 1 
Query:   22 TSCALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWYR 165
            T  A+LLR   SL PYSGEA  P++GDYEAQRHWMEVTT LP+ +WYR
Sbjct:   16 TLLAILLRSCTSLHPYSGEASPPMYGDYEAQRHWMEVTTNLPVTEWYR 63
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: A0A6A7BVB7_9PEZI (Alpha-1,3-glucosyltransferase n=1 Tax=Piedraia hortae CBS 480.64 TaxID=1314780 RepID=A0A6A7BVB7_9PEZI)

HSP 1 Score: 75.1 bits (183), Expect = 1.970e-14
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 1 
Query:    4 THPLVVTSCALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWY 162
            T PL+V   ALL R   +LWPYSG A+ P++GD+EAQRHWME+T+ LP+  WY
Sbjct:   31 TAPLLVCLTALLFRWATALWPYSGMAKPPLYGDFEAQRHWMEITSHLPMSHWY 83
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: ALG6_YEAST (Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase n=18 Tax=Saccharomyces TaxID=4930 RepID=ALG6_YEAST)

HSP 1 Score: 75.1 bits (183), Expect = 1.970e-14
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:    1 WTHPLVVTSCALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWY 162
            W    ++  CA++LRC + L PYSG+   P++GD+EAQRHWME+T  LPL +WY
Sbjct:   36 WLPEYIIFVCAVILRCTIGLGPYSGKGSPPLYGDFEAQRHWMEITQHLPLSKWY 89
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: A0A8H8ITV4_9AGAM (Alpha-1,3-glucosyltransferase n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8ITV4_9AGAM)

HSP 1 Score: 75.1 bits (183), Expect = 1.980e-14
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:    1 WTHPLVVTSCALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWY 162
            WT P+++   A+L+RC V L  YSG+   P+HGDYEAQRHWME+T  LPL +WY
Sbjct:  120 WTAPVIIAG-AVLVRCAVGLGGYSGQGTTPMHGDYEAQRHWMEITYHLPLREWY 172
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: A0A2P6NIR8_9EUKA (Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NIR8_9EUKA)

HSP 1 Score: 75.1 bits (183), Expect = 1.990e-14
Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = 1 
Query:    4 THPLVVTSCALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWY 162
            T  L++ S ++L+R  +SLWPYSG  + P+ GDYEAQRHWME+T ++PL +WY
Sbjct:    7 TWLLLILSASMLIRYAISLWPYSGAGKPPMFGDYEAQRHWMEITNSIPLSEWY 59
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: A0A835RW50_VANPL (Alpha-1,3-glucosyltransferase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RW50_VANPL)

HSP 1 Score: 70.1 bits (170), Expect = 2.190e-14
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:    1 WTHPLVVTSCALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWYR 165
            WT  ++V   AL+ R +VSL PYSG+   PI+GDYEAQRHWME+T   P  +WYR
Sbjct:   20 WTSTIIVLFAALV-RVLVSLGPYSGQGTPPIYGDYEAQRHWMEITLHTPALEWYR 73
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BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Match: A0A023GDZ7_AMBTT (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GDZ7_AMBTT)

HSP 1 Score: 74.7 bits (182), Expect = 2.290e-14
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:   31 ALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPLHQWY 162
            ALLLRC  SLWPYSG  + P+ GDYEAQRHWME+T  LP+ +WY
Sbjct:   19 ALLLRCATSLWPYSGAGKPPMFGDYEAQRHWMEITVNLPVTEWY 62
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82389.16431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G191_ECTSI8.340e-2380.77Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus T... [more]
A0A1X2J1D5_9FUNG6.980e-1767.27Alpha-1,3-glucosyltransferase n=1 Tax=Absidia repe... [more]
A0A2R5LPK4_9ACAR6.810e-1566.67Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=O... [more]
V5GV03_ANOGL1.470e-1468.75Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=A... [more]
A0A6A7BVB7_9PEZI1.970e-1458.49Alpha-1,3-glucosyltransferase n=1 Tax=Piedraia hor... [more]
ALG6_YEAST1.970e-1451.85Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-gluco... [more]
A0A8H8ITV4_9AGAM1.980e-1457.41Alpha-1,3-glucosyltransferase n=2 Tax=Ceratobasidi... [more]
A0A2P6NIR8_9EUKA1.990e-1454.72Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1... [more]
A0A835RW50_VANPL2.190e-1456.36Alpha-1,3-glucosyltransferase n=1 Tax=Vanilla plan... [more]
A0A023GDZ7_AMBTT2.290e-1468.18Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig82389contigS-dermatodea_contig82389:64..231 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.1
Seed ortholog evalue3.4e-19
Seed eggNOG ortholog2880.D7G191
Preferred nameALG6
KEGG koko:K03848
KEGG ReactionR06262
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
GOsGO:0003674,GO:0003824,GO:0004583,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006091,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009060,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0015980,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0034645,GO:0036211,GO:0040003,GO:0042175,GO:0042281,GO:0042335,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046527,GO:0048856,GO:0055114,GO:0070085,GO:0071704,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
EggNOG OGsKOG2575@1,KOG2575@2759
EC2.4.1.267
COG Functional cat.M
CAZyGT57
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Hectar predicted targeting categorysignal peptide
Exons1
Model size168
Cds size168
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925330.5339208-CDS-S-dermatodea_contig82389:63..2311622925330.5339208-CDS-S-dermatodea_contig82389:63..231Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig82389 64..231 +
1694079860.1436348-CDS-S-dermatodea_contig82389:63..2311694079860.1436348-CDS-S-dermatodea_contig82389:63..231Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig82389 64..231 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig82389.16431.1prot_S-dermatodea_contig82389.16431.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig82389 64..231 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig82389.16431.1

>prot_S-dermatodea_contig82389.16431.1 ID=prot_S-dermatodea_contig82389.16431.1|Name=mRNA_S-dermatodea_contig82389.16431.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=56bp
WTHPLVVTSCALLLRCMVSLWPYSGEAEQPIHGDYEAQRHWMEVTTALPL
HQWYR*
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mRNA from alignment at S-dermatodea_contig82389:64..231+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig82389.16431.1 ID=mRNA_S-dermatodea_contig82389.16431.1|Name=mRNA_S-dermatodea_contig82389.16431.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=168bp|location=Sequence derived from alignment at S-dermatodea_contig82389:64..231+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TGGACACACCCTCTAGTTGTGACAAGTTGTGCTCTGTTGCTGCGGTGTAT
GGTCTCCTTGTGGCCTTACTCGGGAGAGGCGGAACAACCCATCCACGGCG
ACTACGAAGCCCAGAGGCACTGGATGGAGGTCACCACCGCCCTGCCGCTG
CATCAGTGGTACAGGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig82389:64..231+

>mRNA_S-dermatodea_contig82389.16431.1 ID=mRNA_S-dermatodea_contig82389.16431.1|Name=mRNA_S-dermatodea_contig82389.16431.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=336bp|location=Sequence derived from alignment at S-dermatodea_contig82389:64..231+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TGGACACACCCTCTAGTTGTGACAAGTTGTGCTCTGTTGCTGCGGTGTAT
GGTCTCCTTGTGGCCTTACTCGGGAGAGGCGGAACAACCCATCCACGGCG
ACTACGAAGCCCAGAGGCACTGGATGGAGGTCACCACCGCCCTGCCGCTG
CATCAGTGGTACAGGTGATGGACACACCCTCTAGTTGTGACAAGTTGTGC
TCTGTTGCTGCGGTGTATGGTCTCCTTGTGGCCTTACTCGGGAGAGGCGG
AACAACCCATCCACGGCGACTACGAAGCCCAGAGGCACTGGATGGAGGTC
ACCACCGCCCTGCCGCTGCATCAGTGGTACAGGTGA
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