mRNA_S-dermatodea_contig8238.16430.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8238.16430.1
Unique NamemRNA_S-dermatodea_contig8238.16430.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: D8LDS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS5_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 6.230e-90
Identity = 185/338 (54.73%), Postives = 209/338 (61.83%), Query Frame = 1 
Query:   40 MPNWLASELCMVASFSLGAWKTFKVLKHGATDSNLLKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFVVWGMDHAHHVLNNLVVPNVVQFVVFLPWRFLLVLFPTLPQPDSSYSRHSA---------GSAVKSRRKGNNGGRLSSRLQHLKIPTTPATDAADGEPRRRRSPRTRGEQERSQSPPPLXXXXXXGTATG----NGGKHAGSAKATGTGVARDGVGRDGDISGKSASGIPGTPLVAGGDTVAAVGVXXXXXXXXKDTSPERGS-------GRSGRKRSIGEIVRSAITGDSKVRLRDHLFDLNTASPAPP 993
            MPNWLASELCMVASFSLGAWKTFKVLKHG TD NLLKTWCLLGLLRVFEEY EFLVSWIPFYWLGKC GL LL+LP GNIPTV+FER VVWGMD+AHH+LNNLVVPNVV+F V LPWR LLVLFPT+P P                  G  ++ ++    GG ++S+LQHL  PT     AA+  P+R  S    G     Q  PPL         T     NG  +AGS    G G A   V    D  G       GT   +  D  AA+            TSPE G        GR  R+RS GEI+RSA+TG+S+VRLRDHLFD +TASPAPP
Sbjct:    1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRVFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHILNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSXXXXXXXXXXXXXXXXXGEGLRKKQAATGGG-ITSQLQHLNTPTKKR--AAESTPKRAASA---GAPSTQQQTPPLPARGSPSKTTPVAARNGVANAGSDSKHGGGGASALVAELLDADG-------GTGAASRADGAAAIATPVPFGDDIA-TSPESGGSERRGXXGRPSRRRSFGEIIRSAVTGNSEVRLRDHLFDFSTASPAPP 324
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: A0A6H5KYY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY1_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 8.650e-90
Identity = 186/341 (54.55%), Postives = 211/341 (61.88%), Query Frame = 1 
Query:   40 MPNWLASELCMVASFSLGAWKTFKVLKHGATDSNLLKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFVVWGMDHAHHVLNNLVVPNVVQFVVFLPWRFLLVLFPTLPQPDSSYSRHSAGSAVKSRRKGNN----------GGRLSSRLQHLKIPTTPATDAADGEPRRRRSPRTRGEQERSQSPPPLXXXXXXGTATG----NGGKHAGSAKATGTGVARDGVGR--DGDISGKSASGIPGTPLVAGGDTVAAVGVXXXXXXXXKDTSPERGS-------GRSGRKRSIGEIVRSAITGDSKVRLRDHLFDLNTASPAPP 993
            MPNWLASELCMVASFSLGAWKTFKVLKHG TD NLLKTWCLLGLLR FEEY EFLVSWIPFYWLGKC GL LL+LP GNIPTV+FER VVWGMD+AHHVLNNLVVPNVV+F V LPWR LLVLFPT+P P S      +G+A K+++ G            GG ++S+LQHL  PT   +  A+  P+R  S    G        PPL         T     NG  +AGS    G G A   V    D D+         GT      D  AA+            TSPE G        GR  R+RS GEI+RS +TG+S+VRLRDHLFD +TASPAPP
Sbjct:    1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVLFERVVVWGMDNAHHVLNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSSGSG---SGAAKKNKKAGRGEGLRKKQAATGGGITSQLQHLNTPTKKRS--AESTPKRAASA---GAPSIQHQTPPLPERGSPSKTTPVAARNGVANAGSDSKHGGGGASALVAELLDADV---------GTGAALRADGAAAIATPVPFEDDIA-TSPESGGSGRRGSGGRPSRRRSFGEIIRSVVTGNSEVRLRDHLFDFSTASPAPP 323
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: A0A7R9YDB5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDB5_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.300e-15
Identity = 45/136 (33.09%), Postives = 76/136 (55.88%), Query Frame = 1 
Query:   40 MPNWLASELCMVASFSLGAWKTFKVLKHGATDSNLLKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFVVWGMDHAHHVLN-NLVVPNVVQFVVFLPWRFLLVLFPTLPQPDSSYS 444
            M N++A+    +     G W++FK+LK G  D  +L+ W +LG++R+ E  LE+LVSW+PFYW  K   L  L  P+  +P ++F+  V+  M   H VL+ + +   + + ++ LP+  L ++ P L    S  S
Sbjct:    1 MVNYVATLALNLVCLFAGFWRSFKLLKAGTVDFTILEFWAVLGVVRLLENTLEWLVSWVPFYWTTKSLALLTLCFPESRLPGILFDTLVIPFMRFCHEVLSEDHIEEKLFERLMVLPFVLLDLVIPGLASARSGKS 136
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: A0A8K1FI23_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI23_PYTOL)

HSP 1 Score: 74.3 bits (181), Expect = 1.530e-11
Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 1 
Query:   40 MPNWLASELCMVASFSLGAWKTFKVLKHG------ATDSNLLKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFVVWGMDHAHHVLNNLVVPNVVQFVV 378
            M  +L SE         GA+++ K L         +T + +L+ W  LG L +FEEY EF VSWIPFY+  KC  L LL +P   I  V++  F+   MD     ++  V+P V   VV
Sbjct:    1 MSFYLISEGLTCLGMFNGAYESLKALSRAEKGIEVSTLTQILEFWIALGALTIFEEYAEFFVSWIPFYYFFKCMLLGLLLVPSTKISHVLYHGFIEPTMDKIQEQVHARVLPVVESLVV 119
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: G4YIB0_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YIB0_PHYSP)

HSP 1 Score: 70.1 bits (170), Expect = 3.410e-10
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 1 
Query:   40 MPNWLASELCMVASFSLGAWKTFKVLKH------GATDSNLLKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFV 306
            M  +L SE         GA+++ KVL         AT +++L+ W +L    +F++YLEF +SW PFY+L KC  L LL  P  + P ++FE F+
Sbjct:    1 MTFYLLSEGLTCVGICSGAYESLKVLSRVEKGVDTATLASVLEFWIVLAAAAIFQQYLEFFISWFPFYYLFKCILLGLLLTPSKHFPHLLFEGFI 95
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: A0A225WDV8_9STRA (Receptor expression-enhancing protein 5-like isoform X2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDV8_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.340e-8
Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 1 
Query:   40 MPNWLASE-LCMVASFSLGAWKTFKVL----KHGATD--SNLLKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFV 306
            M  +L SE L  V  FS GA+++ KVL    K   TD  + +L+ W +L    +FE+Y+EF +SW PFY+L KC  L LL  P    P ++FE F+
Sbjct:    1 MTFYLLSEGLTCVGIFS-GAYESLKVLSRVEKGVDTDILAAVLELWIVLAATAIFEQYIEFFISWFPFYYLFKCVLLGLLLTPTTQFPHLLFEGFI 95
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: W2MGF6_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2MGF6_PHYPR)

HSP 1 Score: 63.9 bits (154), Expect = 4.880e-8
Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 1 
Query:   40 MPNWLASE-LCMVASFSLGAWKTFKVL----KHGATDS--NLLKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFVVWGMDHAHHVLNNLVVPNVVQFVV 378
            M  +L SE L  V  FS GA+++ KVL    K   TD+   +L+ W +L    +F++Y+EF +SW PFY+L KC  L LL  P+     + FE F+   +      L+  V+P +   V+
Sbjct:    1 MTFYLLSEGLTCVGIFS-GAYESLKVLSRVEKGVDTDTLAAVLEFWIVLAAAAIFQQYIEFFISWFPFYYLFKCVVLGLLLTPNKQFTHLFFEGFIRPAVVSIKQKLDTNVLPIIETLVI 119
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: A0A5D6Y973_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y973_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.010e-7
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 1 
Query:   91 GAWKTFKVLKHG------ATDSNLLKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFV 306
            GA+++ KVL         +T   +L+ W +L    V+E+Y+EF VSWIPFY+L KC  L LL +P      V+++ FV
Sbjct:   23 GAYESLKVLSRADKGVETSTLCGILEFWVVLAATAVYEQYVEFFVSWIPFYFLFKCGFLGLLLVPHTKFVHVLYDGFV 100
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: A0A8J5M210_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M210_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.610e-6
Identity = 30/92 (32.61%), Postives = 50/92 (54.35%), Query Frame = 1 
Query:  106 FKVLKHGATD-SNLLKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFVVWGMDHAHHVLNNLVVPNVVQFVV 378
            F +  +G +  +N LK   +L    +F++Y+EF +SW PFY+L KC  L LL  P+     ++FE F+   +    H L+  V+P +   V+
Sbjct:   50 FFLFSNGLSQLTNFLKHRIVLAAAAIFQQYIEFFISWFPFYYLFKCVLLGLLLTPNKQFTHLLFEGFIRPAVVSIKHKLDTNVLPIIESLVI 141
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BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Match: H2ZIP9_CIOSA (Receptor expression-enhancing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZIP9_CIOSA)

HSP 1 Score: 55.1 bits (131), Expect = 9.790e-5
Identity = 30/96 (31.25%), Postives = 47/96 (48.96%), Query Frame = 1 
Query:   28 GVGAMPNWLASELCMVASFSLGAWKTFKVLKHGATDSNL--LKTWCLLGLLRVFEEYLEFLVSWIPFYWLGKCFGLALLFLPDG-NIPTVIFERFV 306
            G+     +LAS +C +  F   A+K+ K ++    D +   L  W +     V E + + L+SW PFY+LGKC  L     P G N    I+ +F+
Sbjct:   45 GLWLASGYLASFICNLIGFLYPAYKSVKAIESVGKDDDTAWLMYWVVFATFSVVEFFSDILLSWFPFYFLGKCIFLLWCMAPVGWNGSNTIYRKFI 140
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8238.16430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LDS5_ECTSI6.230e-9054.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYY1_9PHAE8.650e-9054.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9YDB5_9STRA1.300e-1533.09Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8K1FI23_PYTOL1.530e-1136.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4YIB0_PHYSP3.410e-1036.84Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A225WDV8_9STRA1.340e-841.67Receptor expression-enhancing protein 5-like isofo... [more]
W2MGF6_PHYPR4.880e-835.00Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A5D6Y973_9STRA3.010e-739.74Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8J5M210_9STRA1.610e-632.61Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
H2ZIP9_CIOSA9.790e-531.25Receptor expression-enhancing protein n=1 Tax=Cion... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8238contigS-dermatodea_contig8238:2188..6434 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.5
Seed ortholog evalue2.1e-82
Seed eggNOG ortholog2880.D8LDS5
EggNOG free text desc.TB2/DP1, HVA22 family
EggNOG OGs2EAKW@1,2SGUB@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionTB2/DP1/HVA22-related protein
Ec32 orthologEc-08_003160.1
Exons3
Model size2943
Cds size1791
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8238.16430.1prot_S-dermatodea_contig8238.16430.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8238 2227..5321 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925330.454771-UTR-S-dermatodea_contig8238:2187..22261622925330.454771-UTR-S-dermatodea_contig8238:2187..2226Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8238 2188..2226 +
1694079860.0750122-UTR-S-dermatodea_contig8238:2187..22261694079860.0750122-UTR-S-dermatodea_contig8238:2187..2226Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8238 2188..2226 +
1622925330.499115-UTR-S-dermatodea_contig8238:5321..64341622925330.499115-UTR-S-dermatodea_contig8238:5321..6434Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8238 5322..6434 +
1694079860.132707-UTR-S-dermatodea_contig8238:5321..64341694079860.132707-UTR-S-dermatodea_contig8238:5321..6434Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8238 5322..6434 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925330.4656253-CDS-S-dermatodea_contig8238:2226..22891622925330.4656253-CDS-S-dermatodea_contig8238:2226..2289Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 2227..2289 +
1694079860.0869002-CDS-S-dermatodea_contig8238:2226..22891694079860.0869002-CDS-S-dermatodea_contig8238:2226..2289Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 2227..2289 +
1622925330.476785-CDS-S-dermatodea_contig8238:2450..25461622925330.476785-CDS-S-dermatodea_contig8238:2450..2546Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 2451..2546 +
1694079860.1034381-CDS-S-dermatodea_contig8238:2450..25461694079860.1034381-CDS-S-dermatodea_contig8238:2450..2546Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 2451..2546 +
1622925330.486134-CDS-S-dermatodea_contig8238:3689..53211622925330.486134-CDS-S-dermatodea_contig8238:3689..5321Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 3690..5321 +
1694079860.1149487-CDS-S-dermatodea_contig8238:3689..53211694079860.1149487-CDS-S-dermatodea_contig8238:3689..5321Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 3690..5321 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8238.16430.1

>prot_S-dermatodea_contig8238.16430.1 ID=prot_S-dermatodea_contig8238.16430.1|Name=mRNA_S-dermatodea_contig8238.16430.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=597bp
MPNWLASELCMVASFSLGAWKTFKVLKHGATDSNLLKTWCLLGLLRVFEE
YLEFLVSWIPFYWLGKCFGLALLFLPDGNIPTVIFERFVVWGMDHAHHVL
NNLVVPNVVQFVVFLPWRFLLVLFPTLPQPDSSYSRHSAGSAVKSRRKGN
NGGRLSSRLQHLKIPTTPATDAADGEPRRRRSPRTRGEQERSQSPPPLPP
RTPPGTATGNGGKHAGSAKATGTGVARDGVGRDGDISGKSASGIPGTPLV
AGGDTVAAVGVPCTPASGGKDTSPERGSGRSGRKRSIGEIVRSAITGDSK
VRLRDHLFDLNTASPAPPPAAIHEPKPSQADVRSPSTGRNEAVKPISVPQ
VDLPAILTDSVGSKSQRANTAATNGKGATDSPEASAPEPAARPTTRQRPS
YFSKNVPSGADGEGGGGGGGGDEAGGGLSDGPDRGVRRRSGSGRRAPAPE
NSNGPASVKGGVGSAARSVASAPSAGDTAETRARRLAEWRRRRAMQAEAQ
QVKDMRPRRSRVASANATPAPASIAATSVSQGSSDGRSSIGGSGRANPSA
SRRFRHVERFRSEMAAGSPAEANGTDPRTRTSGPSTRAATANGRPK*
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mRNA from alignment at S-dermatodea_contig8238:2188..6434+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8238.16430.1 ID=mRNA_S-dermatodea_contig8238.16430.1|Name=mRNA_S-dermatodea_contig8238.16430.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4247bp|location=Sequence derived from alignment at S-dermatodea_contig8238:2188..6434+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCTAGGGCTACTAGACTGCCTCGTGCGGCGTGGGCGCCATGCCGAACTG
GCTAGCCTCCGAGCTATGCATGGTGGCATCGTTCTCGCTGGGAGCATGGA
AGGTAGGCCTTTGAGTGACCCCCCGGGAGGGTTGTCCACACTCTTTCCTC
TCAAATAAAGTTGTCGCACCGTTTTTCCGGTCCTTCTACAAAAAATTAAC
AACATTTTTTTTGCACTATCTTCGACTTGCGATGCCGTTTCTTTTGCGCC
GCTGGGTCTCCAGACGTTCAAGGTGCTCAAGCACGGTGCCACGGACTCCA
ACCTGCTCAAGACGTGGTGTCTGCTGGGCCTTCTGCGTGTATTCGAGGAG
TACTTGGAGGTGGGGAAACGAAAAAAAAAACGAAAATGTCGTTCGCGTTC
CCCTCGATTTTCGAGGTTTGTTTTGCAGCAGCTAAAAATTATAGGAGTAA
CAAAATAGAGTTCGTCGTTGTTTCTTTGCTCCCGCCATCTGGCCGTCCCA
CTCCGCGCGTGGTGATCGCACCGCTACATAGTGGCCTCATGCGAACCTGT
GGCTCTTGCTGCGCCCGCGTTCCGCCGCCGCGATTCCTGTCAGAGATCTC
ATGGACCACCCGCGTTCGAAAAAAACTGTTATGTTTGGAATGCAATACAG
CAAACTTCCCCCCCCGTCTTCTCTCTCCGCATGCCACTGGTCGAAAAGTC
GAAATATGTTGATTTATGTTACGTTATGATAAAATATCATAGCCGATTGA
GGCCAAAACCGAGGGCTTCGGTCGTGTGTCGTGTGTCCGCAATCTCGACG
TGGATGCATACGAGAACCTGTCTGTTCTCTGTGGGTGTCAGTTGTTGGTT
GCTCCTCCACAACTCAGGTAACGTTTTGTAAGCGATAAACCTGTCGTCCG
ATGGTACCTGAAGGCCTGGCGGTACCGTTAGCGAGTTTCACGGTATTATC
TTTGTTGACAGTCAGGGTAGTTATTGACGATACTCTGTATTGTCTATTTT
CTACTGTCTGTGTTATACTCTGCCCCTAAAATTTTGGACGAAACATGCAA
CATGACCGCATGCCATGCCCGCGCTTATCTGTCAATCTGCGCATGTTGCA
CTCACGTCGCATGGATCACTATTATAGTCTATTTTGAGCTTTTCACTTCC
TTTGTTCGGTTGCTGCCCAATGGCCGTTTCATCGCGGTCGCTAACGTGCC
GAGTGCTGTGTTTCGTGCAGCCCGAGCATTGGCCTGTTATTTTCTCTCCA
TGTAAATATGTTCTTGGCCAACCTTAGGCACCCCACCCCGTATAGTATAG
CTCGTCATACAGCAGTATCTCCAGCCGTTCAGCCATCCCTCGGGCGTACA
TGCCACCTTATGCACACGCGCGACCTCCGAGCGTCCCCAAGGAGCACGTC
GATAGGATACAACGCCACGCATCATGCCCTGTTTGGCGTGTTAACCCCCT
CCCCTCCGTCGCTGCCGCCTCGATTCTTGCTTCACCAACAATAAACAAAC
AGTTCTTGGTGTCGTGGATACCCTTTTACTGGCTGGGGAAGTGCTTCGGG
CTGGCGCTGCTGTTCCTCCCCGACGGGAACATCCCCACCGTCATCTTCGA
ACGCTTCGTGGTGTGGGGCATGGACCACGCCCACCACGTGCTGAACAACC
TCGTGGTACCCAACGTTGTGCAGTTCGTTGTCTTCCTCCCTTGGCGCTTC
CTGCTGGTCCTCTTCCCGACGCTTCCCCAGCCGGACTCTTCTTACTCCCG
TCATAGCGCCGGCTCGGCCGTGAAAAGTCGCCGCAAGGGGAACAACGGGG
GGCGCCTTTCTTCGCGCCTCCAGCACCTCAAGATACCGACGACCCCCGCG
ACGGACGCTGCCGATGGAGAGCCGCGGCGGCGGCGTTCGCCTCGGACACG
CGGGGAGCAGGAGCGGTCGCAATCGCCCCCTCCGCTGCCGCCGCGAACGC
CTCCGGGGACGGCCACAGGAAACGGGGGGAAACATGCCGGTTCGGCGAAG
GCCACCGGTACCGGCGTTGCTCGAGACGGAGTGGGGCGCGACGGTGATAT
CTCGGGAAAGTCCGCTTCTGGTATACCGGGAACGCCCTTGGTGGCAGGTG
GAGATACTGTGGCGGCGGTTGGCGTTCCGTGCACTCCTGCAAGTGGCGGG
AAGGATACCAGTCCTGAGAGAGGAAGCGGCCGCTCTGGGCGGAAGCGCTC
CATCGGCGAGATCGTGCGTTCGGCGATAACGGGGGACTCCAAGGTCCGCT
TGCGAGACCACCTGTTCGACCTCAATACGGCGTCGCCCGCCCCGCCCCCA
GCCGCAATCCACGAGCCGAAACCGTCTCAGGCCGATGTCCGTAGCCCTTC
GACCGGTCGGAACGAGGCTGTCAAACCGATATCGGTCCCGCAGGTCGACC
TGCCGGCGATTTTGACCGACAGTGTCGGCTCGAAAAGCCAGCGAGCGAAC
ACAGCGGCGACGAACGGAAAAGGGGCGACGGATAGCCCGGAGGCGTCCGC
GCCAGAGCCGGCAGCCAGGCCCACAACCCGCCAGCGTCCGTCATATTTTT
CGAAGAATGTTCCCTCGGGCGCAGATGGAGAAGGAGGAGGCGGAGGTGGG
GGGGGCGATGAGGCCGGCGGCGGGCTTAGCGATGGACCGGACCGCGGGGT
ACGCCGCAGGAGCGGATCAGGGCGGCGGGCGCCAGCCCCGGAGAATAGCA
ACGGCCCGGCGTCTGTCAAAGGTGGAGTTGGCTCTGCGGCCAGGAGCGTC
GCGTCTGCTCCGTCTGCAGGAGATACCGCAGAGACGCGTGCGAGGAGGCT
GGCCGAGTGGCGAAGGAGGCGTGCTATGCAGGCCGAAGCTCAGCAGGTTA
AGGATATGAGGCCGCGCAGGAGCAGGGTTGCTAGCGCGAATGCCACCCCG
GCCCCCGCTAGCATCGCCGCCACCTCGGTGAGCCAAGGAAGTAGCGATGG
CCGCAGCAGCATCGGCGGCAGTGGGAGAGCGAACCCTTCGGCGAGCCGGA
GATTTAGACACGTGGAAAGGTTTCGATCGGAGATGGCCGCGGGATCTCCG
GCGGAGGCCAACGGTACCGATCCTCGGACGCGAACTTCGGGGCCGTCGAC
GAGAGCTGCCACGGCGAATGGTCGCCCGAAGTAGAAATATGGAGGTGATG
GTGGGGAAAGGGGAAGGCTATGACGGCATGGGCAGTACTCGAGAGATGGG
GCTGACAGGTCGTTTTGCTGTGGTACGCGCACGGCGGCGGGGAGGGAGCG
GAGGGCGGGCATGTGCTGCTATTTTAGCGTGTTGATATGTGGTCGTTTTG
AGGTTGTGTAGTGGTGGTCGGGTGTTCTCTGTTGTTGGCTTTGCGTGGAC
GAGGGAGAAAGAGGTGATCGGGGTAGATGTGGCGTGTGGTCGGCCCTCGA
CCCGCCTTGTCGCTTCCCACCAGTTTTGGGCGGTATGTATGTACGGGGTG
CATGTGTGCTGCTCCTCAACATGGCAAAAAAAAGCCTTGTGTAGTGTGTC
CTTACATCTTATGACCACTATACTACATGCTGCTGCTGCTGTTGTGATTT
ACTTACTGTTTGTTGTTGTGATGTTGTTTTCCTCTTTTCTTGCTTTTCTG
ACGGCAGTCATACCAAGTCATACATACATGACACGACATGCTCAGTCTTC
ACGGAGAGTGTTAACTTCAGCTCTACGATAGTACACATATCTGTGATGTG
TGCGCTCACGAAGTTGCATATGAGAGGTGGATATCCATGCGCATTGTGCA
AGTGTAATTGGAGCTATTATAGTTAGAGAGAGGTGGGTTCGGGGATATTT
TTTCGAATGTGATCGCCTTGAGAGCGGGAGGACCGCGGGGTTTATCAGTG
TTCAATTTTCAGTTTTCAATTTTGTCGGATAAAAAACTTGGCTGATCATA
TCGTGAAGGGAGGAATTGTTGTACTATACTTGTAGTGTAATCGGTCTTCG
GATTACAGTACCGAAGTGTGGCACATCCATAAAGCTCACATTTATTGGAG
AGGCGACTGCTTGTTATACTTTTGCAAGTTTTGTGATATGATACAGAATC
TACTTTTGACCATGGGAAGATATGCAGGACTACTGTCCCCTGTTGTTGTG
TAAATGTGAGGGGTCAGAAAAGCATCAGATCACTTTTTTTTCTGATGAAT
CTGATAATTCATGAATGCCACAACTCAAACTTCAATAACTTGTTGCCTCT
GCCCTTGGTATGATACTTTAAAGTATCATAATAATTGTGAAACTTGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8238:2188..6434+

>mRNA_S-dermatodea_contig8238.16430.1 ID=mRNA_S-dermatodea_contig8238.16430.1|Name=mRNA_S-dermatodea_contig8238.16430.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3582bp|location=Sequence derived from alignment at S-dermatodea_contig8238:2188..6434+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCGAACTGGCTAGCCTCCGAGCTATGCATGGTGGCATCGTTCTCGCT
GGGAGCATGGAAGATGCCGAACTGGCTAGCCTCCGAGCTATGCATGGTGG
CATCGTTCTCGCTGGGAGCATGGAAGACGTTCAAGGTGCTCAAGCACGGT
GCCACGGACTCCAACCTGCTCAAGACGTGGTGTCTGCTGGGCCTTCTGCG
TGTATTCGAGGAGTACTTGGAGACGTTCAAGGTGCTCAAGCACGGTGCCA
CGGACTCCAACCTGCTCAAGACGTGGTGTCTGCTGGGCCTTCTGCGTGTA
TTCGAGGAGTACTTGGAGTTCTTGGTGTCGTGGATACCCTTTTACTGGCT
GGGGAAGTGCTTCGGGCTGGCGCTGCTGTTCCTCCCCGACGGGAACATCC
CCACCGTCATCTTCGAACGCTTCGTGGTGTGGGGCATGGACCACGCCCAC
CACGTGCTGAACAACCTCGTGGTACCCAACGTTGTGCAGTTCGTTGTCTT
CCTCCCTTGGCGCTTCCTGCTGGTCCTCTTCCCGACGCTTCCCCAGCCGG
ACTCTTCTTACTCCCGTCATAGCGCCGGCTCGGCCGTGAAAAGTCGCCGC
AAGGGGAACAACGGGGGGCGCCTTTCTTCGCGCCTCCAGCACCTCAAGAT
ACCGACGACCCCCGCGACGGACGCTGCCGATGGAGAGCCGCGGCGGCGGC
GTTCGCCTCGGACACGCGGGGAGCAGGAGCGGTCGCAATCGCCCCCTCCG
CTGCCGCCGCGAACGCCTCCGGGGACGGCCACAGGAAACGGGGGGAAACA
TGCCGGTTCGGCGAAGGCCACCGGTACCGGCGTTGCTCGAGACGGAGTGG
GGCGCGACGGTGATATCTCGGGAAAGTCCGCTTCTGGTATACCGGGAACG
CCCTTGGTGGCAGGTGGAGATACTGTGGCGGCGGTTGGCGTTCCGTGCAC
TCCTGCAAGTGGCGGGAAGGATACCAGTCCTGAGAGAGGAAGCGGCCGCT
CTGGGCGGAAGCGCTCCATCGGCGAGATCGTGCGTTCGGCGATAACGGGG
GACTCCAAGGTCCGCTTGCGAGACCACCTGTTCGACCTCAATACGGCGTC
GCCCGCCCCGCCCCCAGCCGCAATCCACGAGCCGAAACCGTCTCAGGCCG
ATGTCCGTAGCCCTTCGACCGGTCGGAACGAGGCTGTCAAACCGATATCG
GTCCCGCAGGTCGACCTGCCGGCGATTTTGACCGACAGTGTCGGCTCGAA
AAGCCAGCGAGCGAACACAGCGGCGACGAACGGAAAAGGGGCGACGGATA
GCCCGGAGGCGTCCGCGCCAGAGCCGGCAGCCAGGCCCACAACCCGCCAG
CGTCCGTCATATTTTTCGAAGAATGTTCCCTCGGGCGCAGATGGAGAAGG
AGGAGGCGGAGGTGGGGGGGGCGATGAGGCCGGCGGCGGGCTTAGCGATG
GACCGGACCGCGGGGTACGCCGCAGGAGCGGATCAGGGCGGCGGGCGCCA
GCCCCGGAGAATAGCAACGGCCCGGCGTCTGTCAAAGGTGGAGTTGGCTC
TGCGGCCAGGAGCGTCGCGTCTGCTCCGTCTGCAGGAGATACCGCAGAGA
CGCGTGCGAGGAGGCTGGCCGAGTGGCGAAGGAGGCGTGCTATGCAGGCC
GAAGCTCAGCAGGTTAAGGATATGAGGCCGCGCAGGAGCAGGGTTGCTAG
CGCGAATGCCACCCCGGCCCCCGCTAGCATCGCCGCCACCTCGGTGAGCC
AAGGAAGTAGCGATGGCCGCAGCAGCATCGGCGGCAGTGGGAGAGCGAAC
CCTTCGGCGAGCCGGAGATTTAGACACGTGGAAAGGTTTCGATCGGAGAT
GGCCGCGGGATCTCCGGCGGAGGCCAACGGTACCGATCCTCGGACGCGAA
CTTCGGGGCCGTCGACGAGAGCTGCCACGGCGAATGGTCGCCCGAAGTAG
TTCTTGGTGTCGTGGATACCCTTTTACTGGCTGGGGAAGTGCTTCGGGCT
GGCGCTGCTGTTCCTCCCCGACGGGAACATCCCCACCGTCATCTTCGAAC
GCTTCGTGGTGTGGGGCATGGACCACGCCCACCACGTGCTGAACAACCTC
GTGGTACCCAACGTTGTGCAGTTCGTTGTCTTCCTCCCTTGGCGCTTCCT
GCTGGTCCTCTTCCCGACGCTTCCCCAGCCGGACTCTTCTTACTCCCGTC
ATAGCGCCGGCTCGGCCGTGAAAAGTCGCCGCAAGGGGAACAACGGGGGG
CGCCTTTCTTCGCGCCTCCAGCACCTCAAGATACCGACGACCCCCGCGAC
GGACGCTGCCGATGGAGAGCCGCGGCGGCGGCGTTCGCCTCGGACACGCG
GGGAGCAGGAGCGGTCGCAATCGCCCCCTCCGCTGCCGCCGCGAACGCCT
CCGGGGACGGCCACAGGAAACGGGGGGAAACATGCCGGTTCGGCGAAGGC
CACCGGTACCGGCGTTGCTCGAGACGGAGTGGGGCGCGACGGTGATATCT
CGGGAAAGTCCGCTTCTGGTATACCGGGAACGCCCTTGGTGGCAGGTGGA
GATACTGTGGCGGCGGTTGGCGTTCCGTGCACTCCTGCAAGTGGCGGGAA
GGATACCAGTCCTGAGAGAGGAAGCGGCCGCTCTGGGCGGAAGCGCTCCA
TCGGCGAGATCGTGCGTTCGGCGATAACGGGGGACTCCAAGGTCCGCTTG
CGAGACCACCTGTTCGACCTCAATACGGCGTCGCCCGCCCCGCCCCCAGC
CGCAATCCACGAGCCGAAACCGTCTCAGGCCGATGTCCGTAGCCCTTCGA
CCGGTCGGAACGAGGCTGTCAAACCGATATCGGTCCCGCAGGTCGACCTG
CCGGCGATTTTGACCGACAGTGTCGGCTCGAAAAGCCAGCGAGCGAACAC
AGCGGCGACGAACGGAAAAGGGGCGACGGATAGCCCGGAGGCGTCCGCGC
CAGAGCCGGCAGCCAGGCCCACAACCCGCCAGCGTCCGTCATATTTTTCG
AAGAATGTTCCCTCGGGCGCAGATGGAGAAGGAGGAGGCGGAGGTGGGGG
GGGCGATGAGGCCGGCGGCGGGCTTAGCGATGGACCGGACCGCGGGGTAC
GCCGCAGGAGCGGATCAGGGCGGCGGGCGCCAGCCCCGGAGAATAGCAAC
GGCCCGGCGTCTGTCAAAGGTGGAGTTGGCTCTGCGGCCAGGAGCGTCGC
GTCTGCTCCGTCTGCAGGAGATACCGCAGAGACGCGTGCGAGGAGGCTGG
CCGAGTGGCGAAGGAGGCGTGCTATGCAGGCCGAAGCTCAGCAGGTTAAG
GATATGAGGCCGCGCAGGAGCAGGGTTGCTAGCGCGAATGCCACCCCGGC
CCCCGCTAGCATCGCCGCCACCTCGGTGAGCCAAGGAAGTAGCGATGGCC
GCAGCAGCATCGGCGGCAGTGGGAGAGCGAACCCTTCGGCGAGCCGGAGA
TTTAGACACGTGGAAAGGTTTCGATCGGAGATGGCCGCGGGATCTCCGGC
GGAGGCCAACGGTACCGATCCTCGGACGCGAACTTCGGGGCCGTCGACGA
GAGCTGCCACGGCGAATGGTCGCCCGAAGTAG
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