prot_S-dermatodea_contig82.16393.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig82.16393.1
Unique Nameprot_S-dermatodea_contig82.16393.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length193
Homology
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BLAST of mRNA_S-dermatodea_contig82.16393.1 vs. uniprot
Match: A0A6H5KP96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 2.480e-68
Identity = 121/194 (62.37%), Postives = 143/194 (73.71%), Query Frame = 0 
Query:    1 LKSFLGSSLGQAGPFPRPCGELDSGWEVKEVAVDGDIAGGYSIGTLDKPTTRLSQYARGKTGSMNPFTPGGEGLPNATGEGGAGDRVKSTGFAVAPEVHNDYFSEEAVIASIAALDPGSQVPLLSVPPNVNFSDGLTADEASKGTPQWAGQARRQRLVEAEAIDPVGSGGDGNEEVEDKME----ELPPPPKMG 190
            LK+FLGSSLG  GPFP  C +LDSGWEV+EV +DGD AGGYS+GTLDKPTTRLSQYARGKTG+MNPFTPGGE LP A+ EGGAG RVK+T F+  P   +D+ S+ AV  S+AALDP SQ+PLLSVPPNV+FS GLTAD  ++G P WAGQARR+R+V+A+                        ELPPPPK+G
Sbjct:   15 LKTFLGSSLGHHGPFPPACRDLDSGWEVEEVPLDGDSAGGYSVGTLDKPTTRLSQYARGKTGNMNPFTPGGEDLPYASAEGGAGQRVKNTAFSAKPAQQHDHMSDLAVAESVAALDPESQIPLLSVPPNVSFSAGLTADHVAEGAPLWAGQARRRRMVDAKXXXXXXXXXXXXXXXXXXXXXXXXELPPPPKIG 208
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BLAST of mRNA_S-dermatodea_contig82.16393.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 7.680e-68
Identity = 122/194 (62.89%), Postives = 142/194 (73.20%), Query Frame = 0 
Query:    1 LKSFLGSSLGQAGPFPRPCGELDSGWEVKEVAVDGDIAGGYSIGTLDKPTTRLSQYARGKTGSMNPFTPGGEGLPNATGEGGAGDRVKSTGFAVAPEVHNDYFSEEAVIASIAALDPGSQVPLLSVPPNVNFSDGLTADEASKGTPQWAGQARRQRLVEAEAIDPVGSGGDGNEEVEDKME----ELPPPPKMG 190
            LK+FLGSSLG  GPFP    +LDSGWEV+EV +DGD AGGYS+GTLDKPTTRLSQYARGKTG+MNPFTPGGE LP A  EGGAG RVK+T F+  P   +DY S+ AV  S+AALDP SQ+PLLSVPPNV+FS GLTAD  ++G P WAGQARR+R+V+A+A                       ELPPPPK+G
Sbjct:  171 LKTFLGSSLGHHGPFPPARRDLDSGWEVEEVPLDGDSAGGYSVGTLDKPTTRLSQYARGKTGNMNPFTPGGEDLPYAGAEGGAGQRVKNTAFSAKPAQQHDYMSDLAVAESVAALDPDSQIPLLSVPPNVSFSTGLTADHVAEGAPLWAGQARRRRIVDAKAXXXXXXXXXXXXXXXXXXXXXXXELPPPPKIG 364
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82.16393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KP96_9PHAE2.480e-6862.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJL2_ECTSI7.680e-6862.89DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig82contigS-dermatodea_contig82:13119..15908 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig82.16393.1mRNA_S-dermatodea_contig82.16393.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig82 13119..15908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig82.16393.1 ID=prot_S-dermatodea_contig82.16393.1|Name=mRNA_S-dermatodea_contig82.16393.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=193bp
LKSFLGSSLGQAGPFPRPCGELDSGWEVKEVAVDGDIAGGYSIGTLDKPT
TRLSQYARGKTGSMNPFTPGGEGLPNATGEGGAGDRVKSTGFAVAPEVHN
DYFSEEAVIASIAALDPGSQVPLLSVPPNVNFSDGLTADEASKGTPQWAG
QARRQRLVEAEAIDPVGSGGDGNEEVEDKMEELPPPPKMGMPP
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