mRNA_S-dermatodea_contig81828.16380.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: A0A3D4BQL9_9FLAO (Uncharacterized protein (Fragment) n=1 Tax=Cryomorphaceae bacterium TaxID=1898111 RepID=A0A3D4BQL9_9FLAO) HSP 1 Score: 248 bits (632), Expect = 7.990e-80 Identity = 119/217 (54.84%), Postives = 150/217 (69.12%), Query Frame = 1
Query: 34 MEDSRGNIWMGGYRQAHFLRNSADILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAGGIGVSPVTIGGVENSYIKPRVFKMDINGTILWDRIYGPAKALNYPVSIDRSGKDYIIAGQYQSWPLDSSNNREGAYRSYALKIRANGDSVWYREYAPGPLFWDYNRFFDMATTLDGGLVAGGHFQSDVSPLTGSAGSHVWIVRTDSMGCVV 684
MEDS+GNIW+GGYR A N +D LVIALDS+GNKI E+ G+ L EGIAT++E DSNY +A IG + V +G S K RV +MDI GTILWD+ YG ALNY + +++ Y+ +G Y W D + R+ YRS++ K NGDS+WYREY G + D+NR FD++ T DGG VAGGHF SDVSPLTG AGSHVWI++ DS+GCVV
Sbjct: 1 MEDSKGNIWLGGYRLAQLQDNGSDALVIALDSVGNKILEKVLGNPALSEGIATVVEAPDSNYFIATIIGDNLVDLGNNPQSRCKLRVLEMDIGGTILWDKAYGSPLALNYISNCEKTKDGYLSSGYYLDWDRDFTQ-RDAFYRSFSFKTNFNGDSIWYREYIAGSIHSDWNRLFDLSVTPDGGFVAGGHFSSDVSPLTGQAGSHVWIIKADSLGCVV 216
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: A0A2D8SL22_9FLAO (Por_Secre_tail domain-containing protein (Fragment) n=3 Tax=Flavobacteriales TaxID=200644 RepID=A0A2D8SL22_9FLAO) HSP 1 Score: 243 bits (620), Expect = 6.490e-75 Identity = 118/230 (51.30%), Postives = 158/230 (68.70%), Query Frame = 1
Query: 1 GKTVEQQAHNIMEDSRGNIWMGGYRQAHFLRNSADILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAGGIGVSPVTIGGVENSYIKPRVFKMDINGTILWDRIYGPAKALNYPVSID-RSGKDYIIAGQYQSWPLDSSNNREGAYRSYALKIRANGDSVWYREYAPGPLFWDYNRFFDMATTLDGGLVAGGHF-QSDVSPLTGSAGSHVWIVRTDSMGCVV 684
GK VEQQAHN+MEDS+GNIW+GGYRQ N AD+LV+ LDS G K+ E+ YGD LDEGIATI+E DSNY+V +G+ G + K R+ K+D +G+I+WD++YGP + NY + + S + +I+G Y +D + R+ +RSY+ K NGDS+WYREY G + D+NR FD++ T +GG VAGGHF S+ SPLTG AGSHVWI++ DS+GCVV
Sbjct: 156 GKVVEQQAHNVMEDSKGNIWLGGYRQEVGADNVADVLVMVLDSNGGKVMEKAYGDPNLDEGIATILEAPDSNYIVVSNLGIEVGHFAGETGAKTKIRISKIDSDGSIIWDKVYGPKRLTNYASNAEILSTNEIVISGYYIDSEVDYTL-RDALFRSYSFKTNFNGDSIWYREYIAGYHYNDWNRLFDISATPEGGFVAGGHFLSSNNSPLTGGAGSHVWIIKADSLGCVV 384
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: A0A2Z4GI05_9BACT (Uncharacterized protein n=1 Tax=Arcticibacterium luteifluviistationis TaxID=1784714 RepID=A0A2Z4GI05_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 3.610e-14 Identity = 54/206 (26.21%), Postives = 101/206 (49.03%), Query Frame = 1
Query: 91 RNSADILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAGGIGVS------PVTIGGVENSYIKPRVFKMDINGTILWDRIYGPAKALNYPVSIDRSGKDYIIAGQYQSWPLDSSNNREGAYRSYALKIRANGDSVWYREYAPGPLFWDYNRFFDMATTLDGGLVAGGHFQSD-----VSPLTGSAGSHVWIVRTDSMG 675
+ +D+ ++ +D+LGNKI++ ++G + DE + I ++D N LV G + ++GG + +K +D NGT +WD++YG K +Y + + +Y+I G ++ +S +++KI NG+ +W + + G ++ F T DGG + GG S P G+ S +W+++TD G
Sbjct: 1086 KGQSDMYIVKIDTLGNKIWDTSFGTSLYDEATSATI-SSDGNILVIGTSYTANDGDKTDASLGGTDFWLLK-----IDQNGTKIWDKVYGTNKHESYGKILKTTDNNYLIYGTIRALNYATSEY-------FSIKIDINGNIIWSKTFTGGA----EDQMFSATNTQDGGYIFGGRSTSGQNLDKTQPSFGT--SDIWLIKTDVNG 1272
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: A0A523UYJ8_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=candidate division TA06 bacterium TaxID=2250710 RepID=A0A523UYJ8_9BACT) HSP 1 Score: 80.9 bits (198), Expect = 4.970e-14 Identity = 64/213 (30.05%), Postives = 104/213 (48.83%), Query Frame = 1
Query: 64 GGYRQAHFLRNS----ADILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAGGI-GVSPVTIGGVENSYIKPRVFKMDINGTILWDRIYGPAKA-LNYPVSIDRSGKDYIIAGQYQSWPLDSSNNREGAYRSYALKIRANGDSVWYREYAPGPLFWDYNRFFDMATTLDGGLVAGGHFQSDVSPLTGSAGSHVWIVRTDSMGCVV 684
GGY + R+S +D+ ++ DSLGN +++ TYG ++D G ++++T+D Y++AG + P G+ + Y+ K D G+++W+ YG A L Y V G YIIAG S+ + Y +K + G VW Y G + +D + T D G + GGH S G+ V+++RTDS+G V+
Sbjct: 109 GGYVITGYTRSSGAGLSDVYLMKTDSLGNTLWDTTYGGDSIDIG-NSVVQTSDGGYIIAGETQSIDP----GISDVYL----IKTDSLGSVVWEMTYGGASDDLGYSVQQTSDG-GYIIAGLTYSFGTSGGD-------VYLIKTDSLGGVVWDTTY--GGILYDAGH--SVQQTSDDGFIIGGHTSS-----FGAGLGDVYLIRTDSLGTVL 295
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: A0A5N1J529_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Adhaeribacter soli TaxID=2607655 RepID=A0A5N1J529_9BACT) HSP 1 Score: 79.7 bits (195), Expect = 1.300e-13 Identity = 50/169 (29.59%), Postives = 88/169 (52.07%), Query Frame = 1
Query: 19 QAHNIMEDSRGNIWMGGYRQAHFLRNS-------ADILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAGGIGVSPVTIGGVENSYIKPRV-------FKMDINGTILWDRIYGPAKALNYPVSIDRSGKDYIIAGQYQS-WPLDSSNNREGAYRSYALKI 480
+ H+I++ G +GGY + N +D +I +DSLGNK++++T+G D I II+T D NYL+AG ++ G+ N+ + + K+D NG ILWD+ G + A N I+ + ++Y++AG S + D ++ +G + + LK+
Sbjct: 284 EVHSIIQTPDGGYLLGGYSYSDASGNKNAANLGDSDFWLIKIDSLGNKLWDKTFGGANYD-AIQKIIKTKDGNYLLAG------ISASGISNTKLDANIGDNDFWLVKVDGNGNILWDKTIGGSLADNLSSVIEIASEEYLLAGYSMSDYSGDKTSFNKGVWDFWILKL 445
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: UPI00190B48FC (T9SS type A sorting domain-containing protein n=1 Tax=Adhaeribacter terrigena TaxID=2793070 RepID=UPI00190B48FC) HSP 1 Score: 78.6 bits (192), Expect = 3.220e-13 Identity = 59/225 (26.22%), Postives = 103/225 (45.78%), Query Frame = 1
Query: 49 GNIWMGGYRQAHFLRNSA-------DILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAG--GIGVSPVTIGGVENSYIKPRVFKMDINGTILWDRIYGPAKALNYPVSIDRSGKDYIIAGQYQSWPL-DSSNNREGAYRSYALKIRANGDSVWYREYAPGPLFWDYNRFFDMATTLDGGLVAGGHFQSDVSP---LTGSAGSHVWIVRTDSMGCVV 684
G +GG+ ++ N + D ++ +DSLGN ++++TYG D+ + + T D Y+ G G +S G Y V K+D NG +WD+++G A + + +++ G +S D S +G + +KI A G+ +W + + + F M+ T DGG + GG+ S +S + VWIV+TD+ G V+
Sbjct: 54 GGFLLGGHSESDISGNKSENSRGGLDFWIVKVDSLGNVLWDKTYGGNR-DDLLYVLKPTLDGGYIGGGWSGSDLSGDRTGSERGGY-DMWVIKLDGNGNKVWDKVFGGASTDVLEKLLPTADGGFLLGGSSRSSVNGDKSQPSKGLNDFWLIKIDATGNKLWDKVIGGD----NQDHLFSMSQTSDGGYILGGNSNSGISGDKNQKNQGENDVWIVKTDASGNVI 272
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: UPI00198384DF (T9SS type A sorting domain-containing protein n=1 Tax=Hymenobacteraceae bacterium TaxID=2065362 RepID=UPI00198384DF) HSP 1 Score: 78.2 bits (191), Expect = 4.360e-13 Identity = 69/224 (30.80%), Postives = 99/224 (44.20%), Query Frame = 1
Query: 25 HNIMEDSRGNIWMGGYRQAHFLRNSA--DILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAGGIGVSPVTIGGVENSYIKPRV--FKMDINGTILWDRIYGPAK--ALNYPVSIDRSGKDYIIAGQYQSWPLDSSNNREGAYRSYALKIRANGDSVWYREYAPGPLFWDYNRFFDMATTLDGGLVAGGH-FQSDVSPLTGSAGSHVWIVRTDSMG 675
++I+ G +GG +L+ D LVI +DS+G + + +T+G D GIA + AD+NYL+ VS + N + + R+ K+ G LW R YGP + + + SG + G + N G YALK+ A+GDSVWYR Y +N D T DGG V G F P+ A W +TDS G
Sbjct: 229 YSIVSAPDGGFLIGG--SVEYLQGGGNYDGLVIKVDSVGQEQWRRTFGGNFYD-GIANVRVLADNNYLIGTSRTVSAL------NGFTQRRIALHKLSPQGVTLWQREYGPKRDGVQVFAMHELASGALVVAGGTEDTTGATPVGN--GFPMGYALKVCADGDSVWYRTYRHFTGGRSHNYLRDFRPTPDGGFVGCGFLFGRAPDPVANDA----WAFKTDSAG 437
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: A0A2A5BAI7_9FLAO (Por_Secre_tail domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2A5BAI7_9FLAO) HSP 1 Score: 77.8 bits (190), Expect = 5.820e-13 Identity = 69/233 (29.61%), Postives = 107/233 (45.92%), Query Frame = 1
Query: 1 GKTVEQQAHNIMEDSRGNIWMGGYRQAHFLRNSADILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAGGIGVSPVTIGGVENSYIKPRVFKMDINGTILWDRIYGPAKA----LNYPVSIDRSGKDYIIAGQYQSWPLDSSNNREGAYRSYALKIRANGDSVWYREYA--PGPLFWDYNRFFDMATTLDGGLVAGGHFQSDVSPLTGSAGSHVWIVRTDSMGCV 681
G E H + G I+ G + ++ +I + +DSLGN +F + YG + +E +I +T D Y+ GGI N+ P V ++D G LW ++Y PA LNY +I IAG + DS + G + +KI+ANGD++W +EY GP ++ D+ T DGG + G + P TG+ +W+ + DS GCV
Sbjct: 204 GPAAEGPRHIAVCTDGGYIFTGLTQSGGVNPSTGNIRITKIDSLGNVVFNKFYG-LSEEEVPWSIEQTQDGGYIFGGGITFPA-------NNLSHPYVMRLDNLGDTLWTKVY-PAPTGNSPLNYINTIFELPDGSFIAGGMDYF-TDSISI--GKNVGFIVKIKANGDTLWRKEYILLTGPS--SFHEIKDIRPTTDGGFICSGVI-NPAFPDTGT--QDMWLFKIDSNGCV 419
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: A0A7L7L7I2_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Adhaeribacter radiodurans TaxID=2745197 RepID=A0A7L7L7I2_9BACT) HSP 1 Score: 77.4 bits (189), Expect = 1.010e-12 Identity = 61/197 (30.96%), Postives = 97/197 (49.24%), Query Frame = 1
Query: 103 DILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAGGIGVSPVTIGGVENSYIKPRVF--KMDINGTILWDRIYGPAKALNYPVSIDRSGKDYIIAGQYQSWP-LDSSNNREGAYRSYALKIRANGDSVWYREYAPGPLFWDYNRFFDMATTLDGG-LVAGGHF--QSDVSPLTGSAGSHVWIVRTDSMG 675
D ++ + S G K+++Q YG + LDE +A+I++TA+ +L+ GG S + E S K + ++D NG LWD+ YG + S+ +SG Y +AGQ S LD + + +G + LK+ +NG+ VW + Y + T DGG L+AG F +S S WIV+ + G
Sbjct: 1159 DFWLVKISSTGKKLWDQRYGGS-LDEVLASIVQTANDGFLL-GGSSWSSKSGNKTELSRGKSDFWLVQVDKNGNQLWDKTYG-GTGQDEAYSVGKSGGTYFLAGQSDSPAGLDKTRDSQGGLDYWLLKVSSNGEKVWDKRYGGSK----DDELRASIPTQDGGYLLAGKSFSNKSGNKRQDSQGSSDYWIVKANKEG 1348
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Match: A0A2W2B434_9BACT (Por_Secre_tail domain-containing protein n=2 Tax=Taibaiella soli TaxID=1649169 RepID=A0A2W2B434_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 1.090e-12 Identity = 51/202 (25.25%), Postives = 97/202 (48.02%), Query Frame = 1
Query: 100 ADILVIALDSLGNKIFEQTYGDTTLDEGIATIIETADSNYLVAGGIGVSPVTIGGVENSYIKPR-------VFKMDINGTILWDRIYGPAKALNYPVSIDRSGKDYIIAGQYQSWPLDSSNNREGAYRSYALKIRANGDSVWYREYAPGPLFWDYNRFFDMATTLDGG-LVAGGHFQSDVSPLTGSAGSHVWIVRTDSMGCV 681
+D VI LD+LGN ++E+TYG +++ +G+ +I++T DSN++V G T+ +++ + P + K++ G ILW + YG + + + + Y++ S D S N G Y +A++ G +W + Y + + F +++GG L+ G +DV+ T + ++ D G V
Sbjct: 202 SDGWVIKLDTLGNLLWEKTYG-SSMSDGLTSILQTTDSNFVVTG-------TVSAMDSDVVTPLHGGNGAWLVKINPTGQILWSKTYGGSGSQSIYSVLQTPDGGYLLGASTNSNDFDVSVNY-GNYDMWAIRTDDTGKIIWQKSYGGN----NADNFVSFTKSMEGGYLLIGASSSTDVANTTNHGALDAFAIKVDDNGVV 390 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig81828.16380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig81828.16380.1 >prot_S-dermatodea_contig81828.16380.1 ID=prot_S-dermatodea_contig81828.16380.1|Name=mRNA_S-dermatodea_contig81828.16380.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=228bp GKTVEQQAHNIMEDSRGNIWMGGYRQAHFLRNSADILVIALDSLGNKIFEback to top mRNA from alignment at S-dermatodea_contig81828:39..722- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig81828.16380.1 ID=mRNA_S-dermatodea_contig81828.16380.1|Name=mRNA_S-dermatodea_contig81828.16380.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=684bp|location=Sequence derived from alignment at S-dermatodea_contig81828:39..722- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig81828:39..722- >mRNA_S-dermatodea_contig81828.16380.1 ID=mRNA_S-dermatodea_contig81828.16380.1|Name=mRNA_S-dermatodea_contig81828.16380.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at S-dermatodea_contig81828:39..722- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |