mRNA_S-dermatodea_contig8171.16368.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8171.16368.1
Unique NamemRNA_S-dermatodea_contig8171.16368.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: D8LJ56_ECTSI (INCENP_ARK-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ56_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.130e-55
Identity = 97/124 (78.23%), Postives = 108/124 (87.10%), Query Frame = 1 
Query:   10 AAAPGSGVVNSYEMSDHDGSSSXXXXXXXXEHGRKRHSGKKIPAWARGSALAEAINKQYSTDHQLDPDIIFPEVFSCDLEAIFPVNKSKYHRRGSSANWGPDRVTPQEVLTYKRSVGIAKTGKH 381
            AAA G+GVV SYEMSDHDG +S XXXXXXX   R R SGKKIPAWA+GSAL+EA+ +QY+T  ++DPD IFPEVF+CDLEAIFPVNKS+YHRRGSSANW PDRVTPQEVLTYKRSVGIAK  KH
Sbjct:  154 AAAAGTGVVESYEMSDHDGDTSEXXXXXXXMRERSRRSGKKIPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAKVQKH 277
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: A0A6H5KX29_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX29_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.160e-48
Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 1 
Query:   28 GVVNSYEMSDHDGSSSXXXXXXXXEHGRKRHSGKKIPAWARGSALAEAINKQYSTDHQLDPDIIFPEVFSCDLEAIFPVNKSKYHRRGSSANWGPDRVTPQEVLTYKRSVGIAKTGKH 381
            GVV SYEMSDHDG +SXXXXXXXX   R R SGKKIPAWA+GSAL+EA+ +QY+T  ++DPD IFPEVF+CDLEAIFPV KS+YHRRGSSANW PDRVTPQEVLTYKRSVGIAK  KH
Sbjct: 1406 GVVESYEMSDHDGDTSXXXXXXXXMRERSRRSGKKIPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVTKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAKVQKH 1523
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: B7FZQ8_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZQ8_PHATC)

HSP 1 Score: 97.1 bits (240), Expect = 1.050e-20
Identity = 56/113 (49.56%), Postives = 70/113 (61.95%), Query Frame = 1 
Query:   34 VNSYEMSDHDGSSSXXXXXXXXEHGRKRHSGKKIPAWARGSALAEAINKQYSTDH-QLDPDIIFPEVFSCDLEAIFPVNKSKYHRRGSSANWGPDRVTPQEVLTYKRSVGIAK 369
            +++YEMSD + S S  XXX      RKR     +P WA  S L  A+ KQY+ +   LDPD IF EV +CDLEAIF   K++Y RR SS NW  DR T  E LTYKR++G A+
Sbjct:  489 IDTYEMSDREASESDSXXXEESRKPRKR-----VPMWAEKSNLIPALEKQYTVNTGTLDPDEIFGEVQTCDLEAIFDQRKTRYQRRTSSGNWSKDRATTYEKLTYKRTMGYAQ 596
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: A0A4D9CUD1_9STRA (INCENP_ARK-bind domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUD1_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.280e-20
Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 1 
Query:  109 RKRHSGKKIPAWARGSALAEAINKQYSTDHQ--LDPDIIFPEVF-SCDLEAIFPVNKSKYHRRGSSANWGPDRVTPQEVLTYKRSVGIAKTGKH*TAN 393
            R+R S KKIP WARG+ALA A+++Q++TD    +DPD IFPEV  +C+LE IF V K +Y++R SS  W  D VTP E +TY+R++   + G+  + N
Sbjct:  328 RRRRSAKKIPNWARGTALATALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGVTPVERMTYRRAMAYERKGEEVSVN 425
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: A0A7S1FZB2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZB2_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.480e-20
Identity = 62/118 (52.54%), Postives = 76/118 (64.41%), Query Frame = 1 
Query:   19 PGSGVVNSYEMSDHDGSSSXXXXXXXXEHGRKRHSGKKIPAWARGSALAEAINKQYST---DHQLDPDIIFPEVFSCDLEAIFPVNKSKYHRRGSSANWGPDRVTPQEVLTYKRSVGI 363
            PG   +++YE+SD DGS  XXXXXXXX   RKR     +P WAR S L EAI KQY+    +  +DPD IFPEV SC+L+ IF   K KY RR SS NW  D++T  E L YKR++G 
Sbjct:  548 PGRSPMDTYEISDRDGSXXXXXXXXXXRAPRKR-----VPEWARNSNLNEAIIKQYAQCNGEDLIDPDSIFPEVHSCNLQDIFQQKKLKYSRRTSSGNWTEDKITIMENLVYKRNMGF 660
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: A0A1E7FGC0_9STRA (INCENP_ARK-bind domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGC0_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 6.530e-19
Identity = 59/115 (51.30%), Postives = 72/115 (62.61%), Query Frame = 1 
Query:   34 VNSYEMSDHDGSSSXXXXXXXXEHGRKRHSGKKIPAWARGSALAEAINKQYST---DHQLDPDIIFPEVFSCDLEAIFPVNKSK-YHRRGSSANWGPDRVTPQEVLTYKRSVGIA 366
            +++YE+SD + S  XXXXXXXX    K    KKIP WA  + L  A+ KQY+      ++DPD IFPEV SCDLEAIF   K+K Y  R SS NW  D+VT  E L YKR +G A
Sbjct:    4 MDTYEISDREDSXXXXXXXXXXXXXTK----KKIPTWALRANLYPALEKQYNGHIGSRKVDPDEIFPEVQSCDLEAIFGTKKAKAYRSRASSGNWAQDKVTVAEKLVYKREMGFA 114
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: A0A7S3Q8T4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8T4_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.450e-18
Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 1 
Query:   34 VNSYEMSDHDGSSSXXXXXXXXEHGRKRHSGKKIPAWARGSALAEAINKQY-STDHQLDPDIIFPEVFSCDLEAIFPVNKSKYHRRGSSANWGPDRVTPQEVLTYKRSVGIAK 369
            +++YEMSD +G S         ++  ++   KK+P WA+   L  A+ +Q+     ++DPD IF EV +CDLEAIF   K +Y +R S+ NW  DRVT  E L YKR +G  K
Sbjct:  646 MDTYEMSDREGDSDEESDAS--DYYEEKGPKKKVPKWAQKDRLLPALERQFLDNPDRVDPDTIFHEVSTCDLEAIFGQRKKRYAKRASTGNWTKDRVTASEKLVYKRKMGFQK 756
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: A0A7S2S9K2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9K2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.910e-18
Identity = 54/113 (47.79%), Postives = 72/113 (63.72%), Query Frame = 1 
Query:   34 VNSYEMSDHDGSSSXXXXXXXXEHGRKRHSGKKIPAWARGSALAEAINKQY-STDHQLDPDIIFPEVFSCDLEAIFPVNKSKYHRRGSSANWGPDRVTPQEVLTYKRSVGIAK 369
            + +YEMSDH+ S  XXXXXXXX+        KK+P WA  S L +A+ +Q+     ++DPD +FP+V +CDLEAIF   K +Y  R SSANW  D V+  E L YKR++G  K
Sbjct:  142 MQTYEMSDHEDSXXXXXXXXXXK------PKKKVPEWAMRSNLLKALERQFLDGPDRIDPDQLFPQVTTCDLEAIFDQKKKRYATRTSSANWAKDSVSAAETLVYKRTMGFDK 248
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: A0A7S2USU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USU5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 9.840e-18
Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 1 
Query:   34 VNSYEMSDHDGSSSXXXXXXXXEHGRKRHSGKKIPAWARGSALAEAINKQYSTD-HQLDPDIIFPEVFSCDLEAIF-PVNKSKYHRRGSSANWGPDRVTPQEVLTYKRSVG 360
            + +YEMSD +GS S        +  +K     KIPAWA+ + L +A+ KQ+    ++ DPD++F EV +CDL AIF P  K +Y  R S+ NW  D+VT  E LTYKR +G
Sbjct:  509 MQTYEMSDREGSDSDDDSSVDEDEAKK-----KIPAWAQRTNLLKALQKQFDPSVNRYDPDVLFSEVQTCDLTAIFGPSEKRQYRERKSTGNWTNDQVTVAEKLTYKRKMG 614
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BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Match: A0A448ZSM0_9STRA (INCENP_ARK-bind domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSM0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.250e-17
Identity = 60/115 (52.17%), Postives = 72/115 (62.61%), Query Frame = 1 
Query:   34 VNSYEMSDHDGSSSXXXXXXXXEHGRKRHSGKKIPAWARGSALAEAINKQYST---DHQLDPDIIFPEVFSCDLEAIFPVNKSK-YHRRGSSANWGPDRVTPQEVLTYKRSVGIA 366
            +++YEMSD + S  XXXXXXXX         KKIP WA+ S L  A+ +QY+      ++DPD IFPEV SCDLEAIF   KSK Y  R SS NW  D+VT  E L YKR +G A
Sbjct:  397 MDTYEMSDREDSXXXXXXXXXXN----ERMNKKIPTWAQRSNLYSALEEQYNGRIGGKKIDPDEIFPEVHSCDLEAIFGRRKSKNYRSRASSGNWANDQVTAAEKLVYKRQMGFA 507
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8171.16368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LJ56_ECTSI1.130e-5578.23INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
A0A6H5KX29_9PHAE1.160e-4878.81SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
B7FZQ8_PHATC1.050e-2049.56Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A4D9CUD1_9STRA1.280e-2048.98INCENP_ARK-bind domain-containing protein n=3 Tax=... [more]
A0A7S1FZB2_9STRA1.480e-2052.54Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1E7FGC0_9STRA6.530e-1951.30INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
A0A7S3Q8T4_9STRA7.450e-1840.71Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2S9K2_9STRA7.910e-1847.79Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2USU5_9STRA9.840e-1843.24Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A448ZSM0_9STRA1.250e-1752.17INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8171contigS-dermatodea_contig8171:4266..8154 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score92.0
Seed ortholog evalue1.8e-16
Seed eggNOG ortholog2850.Phatr45765
Preferred nameINCENP
KEGG koko:K11515
GOsGO:0000003,GO:0000070,GO:0000212,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000281,GO:0000775,GO:0000776,GO:0000785,GO:0000792,GO:0000793,GO:0000794,GO:0000795,GO:0000800,GO:0000801,GO:0000819,GO:0000910,GO:0001932,GO:0001934,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005721,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0005875,GO:0006323,GO:0006325,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007056,GO:0007059,GO:0007062,GO:0007065,GO:0007079,GO:0007080,GO:0007135,GO:0007140,GO:0007143,GO:0007276,GO:0007292,GO:0008017,GO:0008047,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008356,GO:0009893,GO:0009987,GO:0010032,GO:0010369,GO:0010562,GO:0010604,GO:0015630,GO:0015631,GO:0016043,GO:0016310,GO:0016569,GO:0016570,GO:0016572,GO:0016604,GO:0019207,GO:0019209,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030234,GO:0030261,GO:0030295,GO:0030496,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032133,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032504,GO:0032991,GO:0033036,GO:0033674,GO:0036211,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043539,GO:0043549,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0045132,GO:0045144,GO:0045859,GO:0045860,GO:0045937,GO:0048232,GO:0048285,GO:0048518,GO:0048522,GO:0048609,GO:0050000,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051174,GO:0051177,GO:0051179,GO:0051225,GO:0051233,GO:0051234,GO:0051246,GO:0051247,GO:0051255,GO:0051257,GO:0051276,GO:0051301,GO:0051303,GO:0051305,GO:0051310,GO:0051321,GO:0051338,GO:0051347,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0060255,GO:0061640,GO:0061983,GO:0065007,GO:0065009,GO:0070013,GO:0070192,GO:0070925,GO:0071103,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0072686,GO:0072687,GO:0080090,GO:0090306,GO:0098687,GO:0098772,GO:0098813,GO:0099086,GO:0140013,GO:0140014,GO:1901564,GO:1903046,GO:1903047,GO:1990023,GO:1990385
EggNOG free text desc.Inner centromere protein, ARK binding region
EggNOG OGs2XDFH@2836,KOG4456@1,KOG4456@2759
COG Functional cat.D
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons3
Model size426
Cds size336
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8171.16368.1prot_S-dermatodea_contig8171.16368.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8171 4308..8106 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925326.1766827-UTR-S-dermatodea_contig8171:4265..43071622925326.1766827-UTR-S-dermatodea_contig8171:4265..4307Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8171 4266..4307 -
1694079857.160985-UTR-S-dermatodea_contig8171:4265..43071694079857.160985-UTR-S-dermatodea_contig8171:4265..4307Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8171 4266..4307 -
1622925326.2282434-UTR-S-dermatodea_contig8171:8106..81541622925326.2282434-UTR-S-dermatodea_contig8171:8106..8154Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8171 8107..8154 -
1694079857.2116227-UTR-S-dermatodea_contig8171:8106..81541694079857.2116227-UTR-S-dermatodea_contig8171:8106..8154Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8171 8107..8154 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925326.1968157-CDS-S-dermatodea_contig8171:4307..44301622925326.1968157-CDS-S-dermatodea_contig8171:4307..4430Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8171 4308..4430 -
1694079857.1814005-CDS-S-dermatodea_contig8171:4307..44301694079857.1814005-CDS-S-dermatodea_contig8171:4307..4430Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8171 4308..4430 -
1622925326.2063575-CDS-S-dermatodea_contig8171:6525..66541622925326.2063575-CDS-S-dermatodea_contig8171:6525..6654Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8171 6526..6654 -
1694079857.1918676-CDS-S-dermatodea_contig8171:6525..66541694079857.1918676-CDS-S-dermatodea_contig8171:6525..6654Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8171 6526..6654 -
1622925326.2183163-CDS-S-dermatodea_contig8171:8022..81061622925326.2183163-CDS-S-dermatodea_contig8171:8022..8106Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8171 8023..8106 -
1694079857.2015224-CDS-S-dermatodea_contig8171:8022..81061694079857.2015224-CDS-S-dermatodea_contig8171:8022..8106Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8171 8023..8106 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8171.16368.1

>prot_S-dermatodea_contig8171.16368.1 ID=prot_S-dermatodea_contig8171.16368.1|Name=mRNA_S-dermatodea_contig8171.16368.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=112bp
MSDHDGSSSESESDDDEEHGRKRHSGKKIPAWARGSALAEAINKQYSTDH
QLDPDIIFPEVFSCDLEAIFPVNKSKYHRRGSSANWGPDRVTPQEVLTYK
RSVGIAKTGKH*
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mRNA from alignment at S-dermatodea_contig8171:4266..8154-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8171.16368.1 ID=mRNA_S-dermatodea_contig8171.16368.1|Name=mRNA_S-dermatodea_contig8171.16368.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3889bp|location=Sequence derived from alignment at S-dermatodea_contig8171:4266..8154- (Saccorhiza dermatodea SderLu1190fm monoicous)
GTGGCCGTGGCCGCGGCACCAGGGAGCGGTGTTGTTAACAGTTATGAGAT
GTCGGACCACGACGGGTCTAGCTCGGAGAGCGAGAGCGACGACGATGAGG
AGCACGGTCGAAAGAGGCATTCGGGGAAGAAGGTGCGTTTTGTCTTTTTT
TTTTATGGTGGTGGTGGGGGGGGGGGGCTTTTAAAGCTTTTTTCCGTCAT
GTTTTTTTTTTTTTTTTTTCAAGGGGTTGCGGGAGGTGTTACCTGTTGTC
GTTCCTGCTGGGTGTGCTCTTGTGTAGTACATGCGTAAGTTAACCGGCCG
TAGCTCTTGTCGTTAGGCTTGCGGATCGCTGTTGCACCGTGTTTGTTCAT
GTGACCGGTATTTGTGCACGTTTTTGTGTTGCTGTTTGTGAGGGCTCGGT
ACACTTGCAGCCGACGATTTTGTGTGAGTAGCCGACGGCATTGCCAGCTT
GCGTCACACAGAGTTTGGTTGTGCGTTATCTGCAATCACGTACCCATAAT
CTCCTGTGTATGAAATACGCTATTAGAGTGCTTAGTACATATCATACACG
CGTGCGCAACTTAGGGACATACTTTTGTTACTCTGTGGAGGTAGCTGTGC
GCTTTGGCGAGTTACTGATTTTGCTTTTTTAATACGAAGTGAGCATCTTC
GGATCGAAAGTGACCTCACGCGCGAGAGCAAAGCGAGGCAGGCCTGACAC
GCTCGAAACAGCCCTTTCACGCACCCAGTCTGGCTGTCTACAACAACGTC
CGGGCTATGCCGTGGCGTTAGACGGAGCTGACCAAACACCCCCCCCCCCA
CCCCCACCCCCTCCCCCCCCGTCCCCCCCCCCACATACACTCNNNNNNNN
NNCGTCAAACCACCCTTTCACCCCCCCCCCCCGGCTCGCTACCACACCCC
CCCGGCTTTCCCGTGGCGTTGAAAGGGACCCCCCCCCCCCCCCCCCCCTC
CCCCCTCCTGCCTGATATATACCACAAAAACTACAGCTCTAGTGAGGAGT
GAGGTATTATCCCGTGGTATCCGTCCATTATTTTTCATGTTGAGCGCTCA
AGTTTGATTTATTTTATTTTATTTTATTTGCACACGTATAGCAGTAGCGT
GCAGAAAAACAGATGTATTGATCGTGAGCATGCAGCATTAAACATGAGCC
TCAAATCCCTTCACCCCCCACCCCCTAAGTCCCCCCAAGTTGCATCGGTT
GTCGTGTTTGATAGCCCAGTAAGATCGATGCTGTGCAATACCAACAGTCA
ATAATGTGGTCCCGCAATGCTATAATACTATAATAGGATGCTAAAACCGA
CACGAAATCCCCACGATGAAATTTTTCATGCTAATGAGGATAGTGACCAT
GATAAAGCACCTCACATCAACCGCCGTCACAATCCAGCCTTAGTGCGTCA
GAAAATATCCGTTCGGATACGACATGCTTCAAAAATAAAACATACAACCC
CCCCCGCCCCCCCGCCTCGCCTTTATAACGGTGCTGTTCCGACAACCCAG
ATTCCTGCCTGGGCGAGGGGCTCTGCCCTGGCCGAAGCTATAAACAAGCA
GTACTCGACCGACCACCAGCTTGATCCCGACATTATTTTCCCCGAGGTCT
TTAGCTGCGACCTGGAGGCCATATTCCCGGTAAGGCACTGTTTATGTTCG
TTGGATAAGGGCGGATTGGTTCGGCAGCGTTCAAATTTTCCTTATTAATT
AATACAAGAGTCAAACCATTTTTTTAGAAAATCCTATACGATTTACACTT
TCAACTGCATAGCGATACGCCTGCCGTGGGTCGCCACACCGTATCCCAAA
CCTAACCCGCACATCGTCCTGCCAACGCACACCTCACGGGCGACAGCCTT
ACCTTACCTTACCTTACCTTACCTTACCTTACCTTACCTTACCTTACCTT
ACCTTACCTTACCTTACCTTACCTTACCTTACCTTACCTTACCTTACCTT
AACGTGGCTTGCAACTACAATAGTCACTATTAATAGTATTAATAGTAGAT
AGCCACGGGCTACGCCACGCCCGTGAGGCAAAACATACTAGTATTTTCAC
CACTTGTTAATAATGGCCCCGTCTGAAATCACTATGAATTTTTGGTTCAC
AACTGTTTCACCGCTCAACTCTAAATCGCCATTGTTTTCCGCAGAAGAAA
ATCACTCTACATCGCTAGAAAAAACGTGAAAAGCGCTATTCGTTGATATA
CATATGTACCGCCTAGCCTACACGTAGTCGGCCTTGGGGCAAATTGTTGA
CGTGGATGCGTAGGCCAATCAGCAATCAGAAGGGTGTCCCGGCGCTTGGG
TTGGTTAGCTGGCGGCGCTGGGTTGGCGTGAGAGAAGATTGATACCAAAC
ATATCGTTTTAGCCCAGTGTGCCCGAACTGATTAGGCCACATTTGGCCAC
ACCGACCTATGAATATAGTGGCACATTTCACACTTGTTACTATTCGCCCA
CCTATCAATACTGTAGCAGTTACCCGCTTCTATGGGTTAGGGTTAGGTTT
TTTGTATAGAAACATAACACAGAAAGTGTACAGTCCATAACTACAGGAAT
CGGGAGAGGACCCGGGCGGTGGAGACTTTGTTGTACACAAAAAAAACGAG
ATGATTTCACAGCCGTCCGAAAGATAACATCCTTATTAATAGTAGAACGT
GGTCCAGGCGACTCCCGAAGTGCAATACTCGGCTCGGCAGAACGTACCCC
GGGCAAACCGTCAGTCGTGAGTTCGAGGTGAGGCATTGTCCAAAGTACAG
TAGACTGGGTTGTGAGTGGTGAACTGCCCTGCCCTCGATCGATTGGTTCG
TGGACGTGTGTGCTCGTGAGACCTTTTGCCGAATCGGTGTATTGTATATA
TCGATTTCGAATCATTTTCGCCCCTGTTTGCAGTGCTGACGGAAACTTAC
GATAACCCCAAACAATTTGTTGCAAAACTACTGTGTTAGCCAAGCGCTGG
CACGGGGACCCAGGCATCGACCCAACCGACCCTGATCCTAACCCCCACCC
ATATCGCTCCAGCACCTTAACCTTCATCCGGGGGCTGTAGCGCTTAAACG
CGGCTGCGCCGCGATTGGGCCAAATTTCCCAAACGGCCATTCCGACCAGA
TCCTGACCACAGACTGTCAGCTTTGGCCAGAAAAAAACGCCGAAAAATTA
TTTGTATACGAAGTGTGTAAGCTATTATAGTTTACTGTCTACAAGAGGGT
GCGGATATCGCGTTCGTCGTGCTCCCGAAAAAGCGAGGTTGTGTGTTCGC
TTCTGCATCGAACGGGCCAGCGCGTAATCGTCCATCGCTTGCTTCCCGTT
CGCAATCGCTTGCTTTTTTTTATCGAAAGACTAAGAATCCGGGGAGAGGG
GTCGTCATAATTTCGTTGTTGCCGTGCCGCCTCTCGTGTCATACACATGC
TATAATTACTCTTACCGCTTTGCACGTAGAGCTCTATTGTTTTAACAGCG
ATATAGAGTTCTCCGTTGATGCAGAATTTGATGCCAAAAGTCGAGTTGAT
TCCAGAGGGGGCGCCCTTGCAAGCAAAGTGTTGAAAAGAGTATAATAGGA
ATTACAGAGTGCACTCACGATTGCACCTCACGGACGTAGCCGTAGCTACC
TACTATTAATAGTATTTATTCATGATAGTAGCCGTGTGGACGACCCCCGC
GACTCCCTAAAGCCTAGACATACTGTAGTACTGTACTCCTAGTTATATCG
TTTTCATTTTATTTTAACGTGCAGGTGAACAAGAGCAAGTATCACAGGAG
GGGTAGCAGCGCGAATTGGGGCCCGGACCGGGTTACCCCGCAGGAGGTTC
TCACCTACAAGCGGAGCGTGGGCATTGCAAAGACGGGAAAGCACTAAACC
GCGAACGCCGCGGCTGCTGCTGCTAAATAGTTGGCGCGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig8171:4266..8154-

>mRNA_S-dermatodea_contig8171.16368.1 ID=mRNA_S-dermatodea_contig8171.16368.1|Name=mRNA_S-dermatodea_contig8171.16368.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at S-dermatodea_contig8171:4266..8154- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCGGACCACGACGGGTCTAGCTCGGAGAGCGAGAGCGACGACGATGA
GGAGCACGGTCGAAAGAGGCATTCGGGGAAGAAGATGTCGGACCACGACG
GGTCTAGCTCGGAGAGCGAGAGCGACGACGATGAGGAGCACGGTCGAAAG
AGGCATTCGGGGAAGAAGATTCCTGCCTGGGCGAGGGGCTCTGCCCTGGC
CGAAGCTATAAACAAGCAGTACTCGACCGACCACCAGCTTGATCCCGACA
TTATTTTCCCCGAGGTCTTTAGCTGCGACCTGGAGGCCATATTCCCGATT
CCTGCCTGGGCGAGGGGCTCTGCCCTGGCCGAAGCTATAAACAAGCAGTA
CTCGACCGACCACCAGCTTGATCCCGACATTATTTTCCCCGAGGTCTTTA
GCTGCGACCTGGAGGCCATATTCCCGGTGAACAAGAGCAAGTATCACAGG
AGGGGTAGCAGCGCGAATTGGGGCCCGGACCGGGTTACCCCGCAGGAGGT
TCTCACCTACAAGCGGAGCGTGGGCATTGCAAAGACGGGAAAGCACTAAG
TGAACAAGAGCAAGTATCACAGGAGGGGTAGCAGCGCGAATTGGGGCCCG
GACCGGGTTACCCCGCAGGAGGTTCTCACCTACAAGCGGAGCGTGGGCAT
TGCAAAGACGGGAAAGCACTAA
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