prot_S-dermatodea_contig81614.16360.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig81614.16360.1
Unique Nameprot_S-dermatodea_contig81614.16360.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length73
Homology
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BLAST of mRNA_S-dermatodea_contig81614.16360.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.060e-25
Identity = 57/75 (76.00%), Postives = 60/75 (80.00%), Query Frame = 0 
Query:    1 MLVEAMDADDAMGSYDPWGTGKYKGFEIKKEEPRGPEGSEDGGQAT---GP-VSFKKRKGPGNKGKFRKKAREDD 71
            MLVEAMDADDAMGSYDPWGTGKYKGFEI  + PRGPE    G       GP V+FKKRKGPGNKGKFRKKAR+DD
Sbjct:  367 MLVEAMDADDAMGSYDPWGTGKYKGFEIANDAPRGPEEEAAGXXXXXXXGPAVAFKKRKGPGNKGKFRKKARDDD 441
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig81614.16360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFI0_9PHAE1.060e-2576.00Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig81614contigS-dermatodea_contig81614:460..678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig81614.16360.1mRNA_S-dermatodea_contig81614.16360.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig81614 457..678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig81614.16360.1 ID=prot_S-dermatodea_contig81614.16360.1|Name=mRNA_S-dermatodea_contig81614.16360.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=73bp
MLVEAMDADDAMGSYDPWGTGKYKGFEIKKEEPRGPEGSEDGGQATGPVS
FKKRKGPGNKGKFRKKAREDDN*
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