mRNA_S-dermatodea_contig8151.16351.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: D8LBS0_ECTSI (eIF-5a domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS0_ECTSI) HSP 1 Score: 225 bits (573), Expect = 3.390e-73 Identity = 110/118 (93.22%), Postives = 114/118 (96.61%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEESG 354
VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVV RNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYP+GFG EIK +F++G TLCVTVMAAMGHEQIVTYKEESG
Sbjct: 83 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFDEGATLCVTVMAAMGHEQIVTYKEESG 200
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: A0A6H5KDL5_9PHAE (eIF-5a domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL5_9PHAE) HSP 1 Score: 226 bits (575), Expect = 9.600e-73 Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEESG 354
VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVV RNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYP+GFG EIK +FE+G TLCVTVMAAMGHEQIVTYKEESG
Sbjct: 137 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFEEGLTLCVTVMAAMGHEQIVTYKEESG 254
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: A0A835Z7R2_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R2_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.440e-55 Identity = 82/117 (70.09%), Postives = 103/117 (88.03%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEES 351
V NVSTSKTGKHGHAKANFTA DIFTGKKLED++P++H TSVP V R +YQLLDISDDGF SLLTE GDTKDDL+LP +P+GF ++++ +F+ GKTL VTV++AMGH+Q++ YKE++
Sbjct: 49 VANVSTSKTGKHGHAKANFTAIDIFTGKKLEDIVPTSHATSVPNVARVDYQLLDISDDGFLSLLTESGDTKDDLKLPGFPEGFDEQLRTEFDAGKTLIVTVVSAMGHDQVMAYKEDT 165
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: A0A7S2UU65_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU65_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.530e-53 Identity = 81/117 (69.23%), Postives = 102/117 (87.18%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEES 351
VVNVSTSKTGKHGHAKANFTA DIFTGKK ED++P+THTTSVP V R EYQL+DISDDG+ SLLT+ GDTKDDL LPT+P+GF EI+ F++GK++ +TV++AMG +Q+V+ KE++
Sbjct: 46 VVNVSTSKTGKHGHAKANFTAIDIFTGKKYEDIVPTTHTTSVPNVSRAEYQLIDISDDGYLSLLTDSGDTKDDLVLPTHPEGFADEIRAAFDEGKSMVLTVLSAMGTDQVVSMKEDT 162
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: A0A8K1CGM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGM3_PYTOL) HSP 1 Score: 170 bits (430), Expect = 5.230e-52 Identity = 81/117 (69.23%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEES 351
VVNVSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V R EY LLDIS+D F SL+ E GDT++D++LP+YPDGF EI++ FEDGK L VTV+ A G EQI++ KE++
Sbjct: 40 VVNVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRKEYTLLDISEDDFVSLMDESGDTREDVKLPSYPDGFANEIRSDFEDGKQLVVTVLKACGTEQIISKKEDT 156
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: W7U6Y6_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Y6_9STRA) HSP 1 Score: 165 bits (418), Expect = 3.840e-50 Identity = 81/117 (69.23%), Postives = 99/117 (84.62%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEES 351
VVNVSTSKTGKHGHAKANFTA DIF GKK+EDV+P+THTT VP V R+EYQLLDI +DGF SLL E+G T+DDL+LP YP+GF QEI ++DGK+L V+V++A G +QI+ YKEE+
Sbjct: 47 VVNVSTSKTGKHGHAKANFTAIDIFNGKKVEDVVPTTHTTYVPNVNRSEYQLLDI-EDGFVSLLQEDGGTRDDLKLPDYPEGFDQEILKAYQDGKSLSVSVLSACGIDQIIAYKEEA 162
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: A0A662XWR0_9STRA (Eukaryotic translation initiation factor 5A (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWR0_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.900e-49 Identity = 78/118 (66.10%), Postives = 94/118 (79.66%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEESG 354
VVNVSTSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP V R E+ LLDI+DD FCSL+ E G+T++D++LPT+PD F EI+ F+DGK L +TV+ A G EQIV KE+ G
Sbjct: 28 VVNVSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEFTLLDITDDDFCSLMNEGGETREDIKLPTFPDTFADEIRADFDDGKQLVLTVLKACGTEQIVAKKEDLG 145
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: M4B4L4_HYAAE (Eukaryotic translation initiation factor 5A n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4B4L4_HYAAE) HSP 1 Score: 163 bits (412), Expect = 2.950e-49 Identity = 76/116 (65.52%), Postives = 94/116 (81.03%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEE 348
VVN+STSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP V R EY LLDI+DD FCSL+ + GDT++D++LPT+P+ FG+EI+ F DGK L +TV+ A G EQI+ KE+
Sbjct: 43 VVNMSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFCSLMDDSGDTREDIKLPTFPETFGEEIRADFNDGKQLVLTVLKACGTEQIIAKKED 158
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: A0A5D6XTX1_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX1_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.310e-48 Identity = 77/117 (65.81%), Postives = 94/117 (80.34%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEES 351
VV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V R EY LLDISDD F +L+ + GDT+DD++LPT+PD F EI+ F+ GK L VTV+ A G EQI++ KE++
Sbjct: 41 VVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVARAEYTLLDISDDDFVTLMDDGGDTRDDIKLPTFPDNFADEIRADFDSGKQLVVTVLKACGIEQIISKKEDT 157
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Match: K3WUI8_GLOUD (Eukaryotic translation initiation factor 5A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI8_GLOUD) HSP 1 Score: 158 bits (399), Expect = 2.710e-47 Identity = 73/117 (62.39%), Postives = 96/117 (82.05%), Query Frame = 1
Query: 1 VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPDGFGQEIKNQFEDGKTLCVTVMAAMGHEQIVTYKEES 351
VV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V R+EY LLDI+DD F SL+ + G+T++D++LPT+PD F +EI+ F+ GK L +TV+ A G EQ+++ KE++
Sbjct: 40 VVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRSEYTLLDITDDDFLSLMDDSGETREDIKLPTFPDNFAEEIRADFDAGKQLVLTVLKACGTEQVISKKEDT 156 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8151.16351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8151.16351.1 >prot_S-dermatodea_contig8151.16351.1 ID=prot_S-dermatodea_contig8151.16351.1|Name=mRNA_S-dermatodea_contig8151.16351.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=119bp VVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEYback to top mRNA from alignment at S-dermatodea_contig8151:2504..8254- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8151.16351.1 ID=mRNA_S-dermatodea_contig8151.16351.1|Name=mRNA_S-dermatodea_contig8151.16351.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5751bp|location=Sequence derived from alignment at S-dermatodea_contig8151:2504..8254- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8151:2504..8254- >mRNA_S-dermatodea_contig8151.16351.1 ID=mRNA_S-dermatodea_contig8151.16351.1|Name=mRNA_S-dermatodea_contig8151.16351.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=714bp|location=Sequence derived from alignment at S-dermatodea_contig8151:2504..8254- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |