mRNA_S-dermatodea_contig815.16346.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: D7FTR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTR9_ECTSI) HSP 1 Score: 353 bits (906), Expect = 4.670e-115 Identity = 214/393 (54.45%), Postives = 236/393 (60.05%), Query Frame = 1
Query: 85 RGCGRVVAICCCGVAVRMALGIVGLQPTLEGAMELVVSSTSWQRAQEGLFLGTMGLSHYAGSVFTGSPLMLAAAAICAMLPVGAQALAATALFTAFDVMSALLLRAICVRAVAAESQDWETQLEEWMDEDAKPPGRREPSALNVPPAPTTPMASETATVAATSDAETAGRDANGNATPLGKPSSGSMAESVASNLPDVVLAAYLLNPVLAGQCAALSGDVLGRVLPLVALAAAGARRPGLTAAALAAAACLWRFYATALLLPLALVLGQEIKHGGVADGVPETDRAATAGFDPRYFEFDANAFLRLCAAFVGWCVVVLGACWLGTSGSWAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLGMFPEAL 1263
G R V ICC G+A+R+ L + GLQP L GAMELVVSSTSW+RAQEG FLGT+ ETQLEEWMDED+KPP P +T +A E+ + G A P G S+G A VA +LPDVVLAAYLLNPV+AGQCAALSGDVLGRV PL ALAAAG+RRPG+TA ALAAAACLWRFYA LLLP AL+LG G + A FDPR + D AFLRL AAF WC +LG CWL TSGSWAFL AAARGQLLCE+LTPN GLYWYFFAE+FPRFRGFFRVLFLSQPYVYVLPATLRLGMFPEAL
Sbjct: 7 HGVHRAVGICCFGLAMRIGLSLSGLQPMLAGAMELVVSSTSWERAQEGYFLGTL-----------------------------------------------------------------ETQLEEWMDEDSKPP--------TDDPISSTSIAVESNLAGGANTKRQTGNAAVSRGNPTGVSSAG--AGGVAWDLPDVVLAAYLLNPVIAGQCAALSGDVLGRVFPLAALAAAGSRRPGVTAGALAAAACLWRFYAAPLLLPAALMLGT-FSCGSAGAATNKAGGKKAAAFDPRSLKVDGKAFLRLSAAFAAWCAAILGVCWLATSGSWAFLWAAARGQLLCEDLTPNIGLYWYFFAEVFPRFRGFFRVLFLSQPYVYVLPATLRLGMFPEAL 323
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: A0A836CN19_9STRA (GPI transamidase subunit PIG-U n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN19_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.780e-26 Identity = 117/388 (30.15%), Postives = 145/388 (37.37%), Query Frame = 1
Query: 154 GLQPTLEGAMELVVSSTSWQRAQEGLFLGTMGLSHYAGSVFTGSPLMLAAAAICAMLPVGAQALAATALFTAFDVMSALLLRAICVRAVAAESQDWETQLEEWMDEDAKPPGRREPSALNVPPAPTTPMASETATVAATSDAETAGRDANGNATPLGKPSSGSMAESVASNLPDVVLAAYLLNPVLAGQCAALSGDVLGRVLPLVALAAAGARRPGLTAAALAAAACLWRFYATALLLPLALVLGQEIKHGGVADGVPETDRAATAGFDPRYFEFDANAFLRLCAAFVGWCVVVLGACWLGTSGS----------WAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLGMFPEALVRPKSCEA 1287
GL P L A+ELVV SW+RA EG+FL G+S Y G FTGSP +L A + P + +ALF AFDV +ALL+ A+ A E E QL+ M ED +P R + L P + + TA AAY+LNPVLA QCAA SG+V R L+A+A A L A+A ++ Y LLLPLAL+ A P W FL AAA QL + TP GL WY + F RG+F VL V+ P LRLG P L A
Sbjct: 9 GLVPMLSSALELVVPHVSWERALEGVFLKARGVSPYTGGAFTGSPALLLLAQLARRRPQRTWSALTSALFIAFDVAAALLIYAVARAVRADEPSPRERQLQAQMPEDHRPRAAR--ARLLAPD-----LVAHTAA------------------------------------------AAYMLNPVLAAQCAARSGEVPARAALLLAVALAHGXXXXXXXXXLGASAVVFNLYDATLLLPLALLAAHARASRAAAPLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRFLRAAADAQLWQRDATPGVGLRWYLTQQAFASVRGYFAVLLAGHALVHAAPLALRLGALPRPLAEASLAAA 347
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: A0A813F1T8_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F1T8_POLGL) HSP 1 Score: 89.0 bits (219), Expect = 2.950e-15 Identity = 121/399 (30.33%), Postives = 162/399 (40.60%), Query Frame = 1
Query: 112 CCCGVAVRMALGIVGLQPTLEGAMELVVSSTSWQRAQEGLFLGTMGLSHYAGSVFTGSPLMLAAAAICAMLPVG-AQALAATALFTAFDVMSALLLRAICV----RAVAAESQDWETQLEEWMDEDAKPPGRREPSALNVPPAPTTPMASETATVAATSDAETAGRDANGNATPLGKPSSGSMAESVASNLPDVVLAA-----YLLNPVLAGQCAALSGDVLGRVLPLVALAAAGARRPGLTAAALAAAACLWRFYATALLLPLALVLG-QEIKHGGVADGVPETDRAATAGFDPRYFE-FDANA----FLRLCAAFVGWCVVVLGACWLGTS-----GSWAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLG 1245
C GV +R L G+ LE +EL TS R +EGLFL G+S YAG V PL+L + P+ A +A A+ A D+ ALLLR + V A + Q W A + + TS+ S S S + DV+ A YLLNP+ C ALS + + + ++ A A + GL+AAALA FY L PL LVL + A T++AA RY D A FL A F + V+VL +C LG S G FL A+ + +LTPN G++WY F E+F R+R + V F Q Y +P LRLG
Sbjct: 5 CAVGVVLRFLLYAAGVSKMLEDHLELNSPMTSHARLKEGLFLLASGMSPYAGDVCHHPPLLL-----FFLQPLSKAPEVAHFAVLVAVDLAVALLLRQLAVYYKLSAKLSAGQAW---------------------------------AEASIRLVQTSE---------------------SSPSSTPSGIEDVISPAFVGLFYLLNPLTVASCLALSAQNIHHLALIASVCLAAAGKGGLSAAALAVT-----FYVCPL-TPLVLVLPCAYLSFTQRASTRKATEQAADEQDGYRYVRSIDQTAVELNFLPYLAGFT-FMVIVLFSCLLGASAAIMDGELQFLEASFLAVVAVRDLTPNVGVFWYLFIEVFDRYRLLYLVAFHGQLLFYPVPLHLRLG 337
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: A0A813D6L5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D6L5_POLGL) HSP 1 Score: 84.7 bits (208), Expect = 5.140e-14 Identity = 119/399 (29.82%), Postives = 160/399 (40.10%), Query Frame = 1
Query: 112 CCCGVAVRMALGIVGLQPTLEGAMELVVSSTSWQRAQEGLFLGTMGLSHYAGSVFTGSPLMLAAAAICAMLPVG-AQALAATALFTAFDVMSALLLRAICV----RAVAAESQDWETQLEEWMDEDAKPPGRREPSALNVPPAPTTPMASETATVAATSDAETAGRDANGNATPLGKPSSGSMAESVASNLPDVVLAA-----YLLNPVLAGQCAALSGDVLGRVLPLVALAAAGARRPGLTAAALAAAACLWRFYATALLLPLALVLG-QEIKHGGVADGVPETDRAATAGFDPRYFE-FDANA----FLRLCAAFVGWCVVVLGACWLGTS-----GSWAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLG 1245
C GV +R L G LE +EL TS R +EGLFL G+S YAG V PL+L + P+ A +A A+ A D+ ALLLR + V A + Q W A + + TS+ S S S + DV+ A YLLNP+ C ALS + + + ++ A A + GL+AAALA FY L PL LVL + A +++AA RY D A FL A F + V+VL +C LG S G FL + + +LTPN G++WY F E+F R+R + V F Q Y +P LRLG
Sbjct: 5 CAVGVVLRFLLYAAGASKMLEDHLELNSPMTSHARLKEGLFLLASGMSPYAGDVCHHPPLLL-----FFLQPLSKAPEVAHFAVLVAVDLAVALLLRQLAVYYKLSAKLSAGQAW---------------------------------AEASIRLVQTSE---------------------SSPSSTPSGIEDVISPAFVGLFYLLNPLTVASCLALSAQNIHHLALIASVCLAAAGKGGLSAAALAVT-----FYVCPL-TPLVLVLPCAYLSFTQRASTRKASEQAADEQDGYRYVRSIDQTAVELNFLPYLAGFT-FMVIVLFSCLLGASAAIMDGELQFLEDSFLAVIAVRDLTPNVGVFWYLFIEVFDRYRLLYLVAFHGQLLFYPVPLHLRLG 337
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: A0A067CJI2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CJI2_SAPPC) HSP 1 Score: 81.3 bits (199), Expect = 4.920e-13 Identity = 107/388 (27.58%), Postives = 147/388 (37.89%), Query Frame = 1
Query: 97 RVVAICCCGVAVRMALGIVGLQPTLEGAMELVVSSTSWQRAQEGLFLGTMGLSHYAGSVFTGSPLMLAAAAICAMLPVGAQALAATALFTAFDVMSALLLRAICVRAVAAESQDWETQLEEWMDEDAKPPGRREPSALNVPPAPTTPMASETATVAATSDAETAGRDANGNATPLGKPSSGSMAESVASNLPDVVLAAYLLNPVLAGQCAALSGDVLGRVLPLVALAAAGARRPGLTAAALAAAACLWRFYATALLLPLALVLGQEIKHGGVADGVPETDRAATAGFDPRYFEFDANAFLRLCAAFVGWCVVVLGACWLGTSGSWAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLGMFPEA 1260
RV + GV +R+ + L+ EL S +R QEGLFL GL YAG VF PL+L AA +P+ + T L A+LL + A+ + + T E++K LN PP +PL +P LP V AAYL NP S ++ + ++A A R L LA A + + +LLP L++ KH A + F + + A F + FV V + G W FL A + +LTPN G++WYFF ELF RFR +F L P +YVLP LRL P A
Sbjct: 7 RVAGVIVAGVVLRVLAFYYEIDYVLQYRPELTTPLNSLERLQEGLFLAGAGLDPYAGDVFHQPPLVLLAAMGVQSVPLALSSRLVTCL-------GAILLDVLIALGFASVCRAFITSQHAQQSENSK-------VWLNHPPL-----------------------------SPLLQP----------RYLPLTVAAAYLFNPWSLATSLVRSTSLVTYAAIVWSIALAMQHRVSLAICLLAIATYMAVY--PVVLLPSLLLMAYPSKHWLSAVRTTSISDLCSCAF-VQSWGLAAGVFAAYVSLFVYLSKVAM--------GGWGFLDATYLWVVRYPDLTPNIGIFWYFFMELFDRFRNYFLFLLHMHPLLYVLPIYLRLHARPLA 330
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: A0A1B7MZ67_9AGAM (PIG-U-domain-containing protein n=3 Tax=Rhizopogon TaxID=5375 RepID=A0A1B7MZ67_9AGAM) HSP 1 Score: 79.7 bits (195), Expect = 1.620e-12 Identity = 61/205 (29.76%), Postives = 96/205 (46.83%), Query Frame = 1
Query: 640 SMAESVASNLPDVVLAAYLLNPVLAGQCAALSGDVLGRVLPLVALAAAGARRPGLTAAALAAAACLWRFYATALLLPLALVLGQEIKHGGVADGVPETDRAATAGFDPRYFEFDANAFLRLCAAFVGWCVVVLGACWLGTSGSWAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLGMFP 1254
S+ + S ++++AY+LNP L ALS L+ L A +P A+A L Y+ LLLP+ ++L P + A+ PR F N L F+ + +V++GA + GSW+++ A+ L +LTPN GL+WYFF E+F FR FF ++F +Y+LP ++ P
Sbjct: 106 SLHRATTSTAESLIVSAYILNPYLLFPSLALSTSTFENSFTLLTLMFASEGKPSSALLAIAFTINLSP-YSILLLLPILMLLVTS----------PASQLAS-----PRPFHGSINRIASLFGEFMLYWLVLVGAACIIADGSWSWMKASWGASLTLPDLTPNPGLWWYFFTEMFDHFRPFFLMVFSVHLVIYILPVCIKFQHDP 294
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: G4Z7W1_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z7W1_PHYSP) HSP 1 Score: 79.3 bits (194), Expect = 2.410e-12 Identity = 100/370 (27.03%), Postives = 150/370 (40.54%), Query Frame = 1
Query: 166 TLEGAMELVVSSTSWQRAQEGLFLGTMGLSHYAGSVFTGSPLMLAAA-AICAMLPVGAQALAATALFTAFDVMSALLLRAICVRAVAAES-QDWETQLEE-WMDEDAKPPGRREPSALNVPPAPTTPMASETATVAATSDAETAGRDANGNATPLGKPSSGSMAESVASNLPDVVLAAYLLNPVLAGQCAALSGDVLGRVLPLVALAAAGARRPGLTAAAL--AAAACLWRFYATALLLPLALVLGQEIKHGGVADGVPETDRAATAGFDPRYFEFDANAFLRLCAAFVGWCVVVLGACWLGTSGSWAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLGMFPEA 1260
TL ELV S +S++R QEG +L S Y+G V+ PL+ A + + P Q L A A+F + D++ A +C R + E + ++ + EE W+ + VP +PL KP NLP V L+NP A+S + L +L A G AA++ AA Y L++P+ L+L + +K G A E D+ +T G P ++ L F W ++ W SG W F+ +LTPN G++WYFF E+F RF +F + P +YV+P LRL P+A
Sbjct: 29 TLSSRPELVTSVSSFRRLQEGAYLFRSTGSPYSGDVYHQPPLLFALLYPVLQLTPAALQYLVACAVFISVDLLIAAGFARLCARNLQLEEGRRFKVRGEEIWLSQ--------------VP------------------------------VSPLFKP----------ENLPTTVAFIALMNPYSLASSVAMSTVSFTHLAVLYSLVFAS---EGAVAASMMCVAAGTYLSVYPFFLIVPIVLLL-RSVKSGKTASE-EEGDQKSTPG--PSLLSLGVSSLL----VFGVWLGLLFYLSW-SLSGDWGFIEETYMWVATYSDLTPNIGIFWYFFMEVFDRFIPYFLFILHLHPVIYVVPIYLRLAHRPQA 332
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: UPI001B86C28C (GPI transamidase subunit PIG-U n=1 Tax=Suillus paluster TaxID=48578 RepID=UPI001B86C28C) HSP 1 Score: 77.4 bits (189), Expect = 9.190e-12 Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 661 SNLPDVVLAAYLLNPVLAGQCAALSGDVLGRVLPLVALAAAGARRPGLTAAALAAAACLWRFYATALLLPLALVLGQEIKHGGVADGVPETDRAATAGFDPRYFEFDANAFLRLCAAFVGWCVVVLGACWLGTSGSWAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLGMFP 1254
SN +++++ YLLNP L ALS L L+AL A +P A+A A L + LLLP+ L+L P + A+ PR F+ L F+ + +V++GA T G W+++ + L +LTPN GL+WYFF E+F FR FF ++F +Y+LP ++ P
Sbjct: 113 SNAENLIVSVYLLNPYLLLPSLALSTSTFENTLTLLALMFASEGKPSPALLAIAFAMHLSPS-SILLLLPILLLLVSS----------PASHLAS-----PRPFQGSFKHIPSLFGEFILYWLVLVGAACTMTGGGWSWVMGSWGASLTLPDLTPNPGLWWYFFTEMFDHFRPFFLMVFSVHLVIYILPICIKFQHDP 294
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: S7RV59_GLOTA (PIG-U-domain-containing protein n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7RV59_GLOTA) HSP 1 Score: 76.3 bits (186), Expect = 2.180e-11 Identity = 67/198 (33.84%), Postives = 91/198 (45.96%), Query Frame = 1
Query: 676 VVLAAYLLNPVLAGQCAALSGDVLGRVLPLVALAAAGARRPGLTAAALAAAACLWRFYATALLLPLALVLGQEIKHGGVADGVPETDRAATAGFDPRYFEF--DANAFLRLCAAFVGWCV---VVLGACWLGTSGSWAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLGMFP 1254
+V AAYLLNP + ALS L L+ L A RRP + A L AA + +ALLLP +L H +A+ P++F NA L +++G CV VVL C +G W ++ L +LTPN GL+WYFF E+F FR FF ++F +YV P L+ P
Sbjct: 120 LVAAAYLLNPYILLPNLALSTVSFENTLQLLVLLYACRRRP--SPALLLAAILIHLSLYSALLLPSIALLLLSSPHSHLAN--------------PKFFTAYRHPNASLSTLLSYIGECVLYSVVLCLCCTVVAGGWGWVEKTWGVVLTLPDLTPNPGLWWYFFTEMFDHFRPFFLMVFSVHLLIYVAPVCLKFQHDP 301
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Match: A0A3F2RXI6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXI6_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.510e-11 Identity = 103/388 (26.55%), Postives = 152/388 (39.18%), Query Frame = 1
Query: 109 ICCCGVAVRMAL-GIVGLQPTLEGAMELVVSSTSWQRAQEGLFLGTMGLSHYAGSVFTGSPLMLAAA-AICAMLPVGAQALAATALFTAFDVMSALLLRAICVRAVAAESQDWETQLEEWMDEDAKPPGRREPSALNVPPAPTTPMASETATVAATSDAETAGRDANGNATPLGKPSSGSMAESVASNLPDVVLAAYLLNPVLAGQCAALSGDVLGRVLPLVAL--AAAGARRPGLTAAALAAAACLWRFYATALLLPLALVLGQEIKHGGVADGVPETDRAATAGFDPRYFEFDANAFLRLCAAFVGWCVVVLGACWLGTSGSWAFLSAAARGQLLCENLTPNAGLYWYFFAELFPRFRGFFRVLFLSQPYVYVLPATLRLGMFPEA 1260
+ C G VR AL + + TL ELV + TS++R QEG++L S Y+G VF PL+ A + ++P Q A A F D++ A+ +C R + E REP TT S+ +PL +P NLP YLLNP A+S + L +L A+ GA + A+ ++ F+ L++P+ L+L + VAD D T G + + L W ++L W SG W FL +LTPN G++WYFF E+F RF +F + P +YV+P LR+ P+A
Sbjct: 8 VLCLGAFVRAALYALPSVYQTLSTRPELVTAVTSFRRVQEGVYLFQATGSPYSGDVFHQPPLLFALLYPLLELVPPILQYSATCAAFILVDLLIAVGFSRLCRRTLHLEEG-------------------REPKVHE-----TTIWLSQIPV------------------SPLFQP----------KNLPITAAFVYLLNPYSLASGIAMSTVSFTHLAVLYSLVFASEGALAASMMCLAVGTYLSVYPFF---LVVPIVLLLRDVKRSKVVAD---TNDDNQTGGAGSSVLQLAVGCLVTLSV----WLSLLLYLSW-SLSGDWGFLEETYVWVAKYSDLTPNVGIFWYFFMEIFDRFIPYFLFVMHLHPCIYVVPIYLRMAHRPQA 332 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig815.16346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig815.16346.1 >prot_S-dermatodea_contig815.16346.1 ID=prot_S-dermatodea_contig815.16346.1|Name=mRNA_S-dermatodea_contig815.16346.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=430bp GAEVQCRRCLGGEVLAASWAWHMVSCAERGCGRVVAICCCGVAVRMALGIback to top mRNA from alignment at S-dermatodea_contig815:14248..17665+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig815.16346.1 ID=mRNA_S-dermatodea_contig815.16346.1|Name=mRNA_S-dermatodea_contig815.16346.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3418bp|location=Sequence derived from alignment at S-dermatodea_contig815:14248..17665+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig815:14248..17665+ >mRNA_S-dermatodea_contig815.16346.1 ID=mRNA_S-dermatodea_contig815.16346.1|Name=mRNA_S-dermatodea_contig815.16346.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2580bp|location=Sequence derived from alignment at S-dermatodea_contig815:14248..17665+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |