mRNA_S-dermatodea_contig8130.16330.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: D8LCW6_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW6_ECTSI) HSP 1 Score: 253 bits (646), Expect = 3.970e-79 Identity = 128/197 (64.97%), Postives = 149/197 (75.63%), Query Frame = 2
Query: 17 PLWSTMDAYKFEDEMRALDVCAKCLDETKPRLSLLRCTGCRMVLYCSKDHQTGHWKEHRAFCKARKNVAVHLTSTPENRRGSVPPLPSPRVAAG--KEECETFVSVCDATGVFSIFGMFWK------GGKTGKLCNLTVKLGKGPVSCLQTKLQDWEPRTRLAALKTLTVQGSADYVRVTPDISAWLTQRALDESAK 583
P TMD KFEDEMRAL VC KCLDETKPR SL CTGCRMVLYCS +HQ GHW++H+AFCKARK +A P +R VPPL SP AG K ECE +VSVCDATGVFSI GMFWK + +LC+L V+LGKGPV+CL++KLQDWEPRTR AALKTLTVQGSADYVRVT ++A LT+RAL+++ +
Sbjct: 47 PAIDTMDQAKFEDEMRALAVCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKLAGAF---PVSRDSWVPPLSSPHGGAGIAKRECEVYVSVCDATGVFSILGMFWKEDEKDRASSSSRLCSLMVQLGKGPVACLESKLQDWEPRTRWAALKTLTVQGSADYVRVTRAMAASLTRRALEDARR 240
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: UPI001F4F734B (egl nine homolog 1 n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F4F734B) HSP 1 Score: 57.8 bits (138), Expect = 2.370e-6 Identity = 29/61 (47.54%), Postives = 37/61 (60.66%), Query Frame = 2
Query: 116 LLRCTGCRMVLYCSKDHQTGHWKEHRAFCKARKNVAVHLTSTPENRRGSVPPLPSPRVAAG 298
+LRC+ CR V YCSKDHQT HWK+H+AFC +N AV+ + + S P PR G
Sbjct: 16 VLRCSRCRSVYYCSKDHQTKHWKKHKAFCL--QNSAVNSGAAIHHGIISSPNAEIPRSGIG 74
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: A0A6L2Q3S3_COPFO (MYND-type domain-containing protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q3S3_COPFO) HSP 1 Score: 57.8 bits (138), Expect = 3.120e-6 Identity = 28/79 (35.44%), Postives = 37/79 (46.84%), Query Frame = 2
Query: 26 STMDAYKFEDEMRAL-------DVCAKCLDETKPRLSLLRCTGCRMVLYCSKDHQTGHWKEHRAFCKARKNVAVHLTST 241
ST+D E E + + DVC C SL +C+ C+M+ YCSKDHQ HW H+ CKA + T
Sbjct: 915 STVDEEAEEIEHKLIQRNIFLTDVCHVCKSSASSSSSLKKCSNCKMISYCSKDHQKEHWVAHKDLCKAISKICTQNRMT 993
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: A0A059P1D8_9INSE (EGL nine-like protein 1 (Fragment) n=1 Tax=Neocloeon triangulifer TaxID=2078957 RepID=A0A059P1D8_9INSE) HSP 1 Score: 56.6 bits (135), Expect = 5.350e-6 Identity = 25/55 (45.45%), Postives = 30/55 (54.55%), Query Frame = 2
Query: 107 RLSLLRCTGCRMVLYCSKDHQTGHWKEHRAFCKARKNVAVHLTSTPENRRGSVPP 271
R +LLRC+ CR V YC KDHQ HWK+H+ C R NV P S+ P
Sbjct: 13 RENLLRCSRCRQVWYCCKDHQKAHWKKHKRACVQRSNVPGPTPEAPATSLTSLDP 67
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: A0A2J7PP89_9NEOP (MYND-type domain-containing protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PP89_9NEOP) HSP 1 Score: 56.2 bits (134), Expect = 1.040e-5 Identity = 27/85 (31.76%), Postives = 40/85 (47.06%), Query Frame = 2
Query: 2 SGQSPPLWSTMDAYKFEDEMRALD-----VCAKCLDETKPRLSLLRCTGCRMVLYCSKDHQTGHWKEHRAFCKARKNVAVHLTST 241
S +P ST+D + E ++ VC C + SL +C+ C+M+ YCSK+HQ HW H+ CK + H T
Sbjct: 895 SQSAPKPVSTVDEAELEYQLVQRHIFLSYVCHVCKSLESSKCSLKKCSNCKMISYCSKEHQRQHWSAHKDLCKVISKICKHNRMT 979
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: A0A7R8VIM6_TIMDO (Hypothetical protein n=3 Tax=Timema TaxID=61471 RepID=A0A7R8VIM6_TIMDO) HSP 1 Score: 55.8 bits (133), Expect = 1.120e-5 Identity = 30/81 (37.04%), Postives = 43/81 (53.09%), Query Frame = 2
Query: 26 STMDAYKFEDEMRALDVCAKCLDETKPRLSLLRCTGCRMVLYCSKDHQTGHWKEHRAFC------KARKNVAVHLTSTPEN 250
S D +M ++ CA C T RL LRC+ CR+V YCSK+HQT HW+ H+ C K + ++ H +T +N
Sbjct: 55 SVSDRAHHNTKMNSVLCCAVC--GTSERL--LRCSRCRIVYYCSKEHQTEHWRRHKVSCGKSLIDKTKGFISEHGVNTTQN 131
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: A0A6P8YEY0_THRPL (egl nine homolog 1 isoform X1 n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YEY0_THRPL) HSP 1 Score: 55.5 bits (132), Expect = 1.480e-5 Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 2
Query: 80 AKCLDETKPRLSLLRCTGCRMVLYCSKDHQTGHWKEHRAFCK 205
A C D +LLRC C++V YCSKDHQ HWK+H+ CK
Sbjct: 4 AACCDFCGAANNLLRCARCKLVYYCSKDHQLKHWKKHKVVCK 45
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: A0A1Y1KLA6_PHOPY (MYND-type domain-containing protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1KLA6_PHOPY) HSP 1 Score: 52.4 bits (124), Expect = 1.740e-5 Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 2
Query: 74 VCAKCLDETKPRLSLLRCTGCRMVLYCSKDHQTGHWKEHRAFCK-----ARKNVAVHLTSTPENRRGSVPPLPSPRV 289
VCA+C L+C+GC++V YCSKDHQ +W+ H+ C+ ++ HL +T + + G + SP V
Sbjct: 15 VCAECQQPAN-----LKCSGCKLVSYCSKDHQKNNWQVHKTLCRPFEIQTSPDLGKHLIATRDIQPGDMILCESPLV 86
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: UPI000738255B (SET domain-containing protein SmydA-8 n=1 Tax=Diachasma alloeum TaxID=454923 RepID=UPI000738255B) HSP 1 Score: 55.1 bits (131), Expect = 2.140e-5 Identity = 29/96 (30.21%), Postives = 46/96 (47.92%), Query Frame = 2
Query: 59 MRALDVCAKCLDETKPRLSLLRCTGCRMVLYCSKDHQTGHWKEHRAFCKARK-----NVAVHLTSTPENRRGSV-----------PPLPSPRVAAG 298
M D+CA C + + C+ C++V YCS++HQ HWKEH ++C+ K + H +T + +G V PP+ +P V G
Sbjct: 1 MSGEDICAVCQQPAQQK-----CSACKLVFYCSREHQKCHWKEHASYCRPFKIDRDDTLGRHYIATRKIEKGEVILRERTPLVAGPPVETPPVCLG 91
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Match: A0A6G1FYD4_9PEZI (MYND-type zinc finger protein samB n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1FYD4_9PEZI) HSP 1 Score: 54.7 bits (130), Expect = 2.530e-5 Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 2
Query: 116 LLRCTGCRMVLYCSKDHQTGHWKEHRAFCK 205
L RCTGC +VLYC K+HQT HW+EH+ CK
Sbjct: 28 LRRCTGCCLVLYCGKNHQTSHWREHKRDCK 57 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8130.16330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8130.16330.1 >prot_S-dermatodea_contig8130.16330.1 ID=prot_S-dermatodea_contig8130.16330.1|Name=mRNA_S-dermatodea_contig8130.16330.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=198bp MDAYKFEDEMRALDVCAKCLDETKPRLSLLRCTGCRMVLYCSKDHQTGHWback to top mRNA from alignment at S-dermatodea_contig8130:2345..4989- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8130.16330.1 ID=mRNA_S-dermatodea_contig8130.16330.1|Name=mRNA_S-dermatodea_contig8130.16330.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2645bp|location=Sequence derived from alignment at S-dermatodea_contig8130:2345..4989- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8130:2345..4989- >mRNA_S-dermatodea_contig8130.16330.1 ID=mRNA_S-dermatodea_contig8130.16330.1|Name=mRNA_S-dermatodea_contig8130.16330.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at S-dermatodea_contig8130:2345..4989- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |