prot_S-dermatodea_contig8108.16303.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8108.16303.1
Unique Nameprot_S-dermatodea_contig8108.16303.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length378
Homology
BLAST of mRNA_S-dermatodea_contig8108.16303.1 vs. uniprot
Match: A0A6H5JHV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV2_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 7.830e-72
Identity = 167/327 (51.07%), Postives = 198/327 (60.55%), Query Frame = 0
Query:    2 LLRKSTYNPWGKPGSGAPLRQADGALVTNVKAYHRAKKQGLIAQDLSPNEITDNEQPFGFPLTDAGDQ------PGVRSPLRTSRS------GGFGHESASAISARPSESAVSLSPPRRRYVFERLPPEEQTDIDRRLKERRDLEVALLGQVEEKRLRKEREVAAKRAEDEIDRIKVLRVLAEERDARHGRVRDKNLKAGEAIP--TPYAGTTRR----LPVHQAHAMEHFRSTAAAPHQLGSSEAKQRYANRRGERRNRGNDASAGAVSFGRQESFRREEGYGDD--IGGRG--SGQAGFGGDGGDRSRILLILRRLEDHGKMLEK 306
            L   +TYNPWGKPGSGAPLRQADGALVTNVKAY+RAK++GLIAQDLSPNEI DNEQPFG+ LT           P  RSPLRTSRS      G  G +   +I A      VSLSPPR RY F+RLPPEEQ+ +DRR+KER++LE ALL QVEEKR ++E E AAK+AED+ +R +VLRVLAEER A   RVRDKNL+AGEA P  +P +G         P  Q H  E         H+  S   +  YA R             G    GR        G+  D  +GG G  +G         DR+ +LLILRRLEDHG++ EK
Sbjct:   66 LQSVATYNPWGKPGSGAPLRQADGALVTNVKAYYRAKQRGLIAQDLSPNEIGDNEQPFGYTLTTKSKMQRFNGIPEDRSPLRTSRSAACAATGKVGEQGPRSIDA----VTVSLSPPRNRYRFDRLPPEEQSYLDRRMKERQELEAALLSQVEEKRAKRELERAAKQAEDKEERARVLRVLAEERAANRHRVRDKNLRAGEAPPALSPSSGGAGDHGWPSPQRQLHRDEQQADITPQRHRRNSRFEEVSYAAR----------PRGGLNGGGRATRLSGGGGWMGDGAVGGAGRAAGPEAAMSSEVDRNSVLLILRRLEDHGRVSEK 378          
BLAST of mRNA_S-dermatodea_contig8108.16303.1 vs. uniprot
Match: D8LGW5_ECTSI (Similar to centrosome spindle pole associated protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW5_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 6.540e-69
Identity = 171/347 (49.28%), Postives = 201/347 (57.93%), Query Frame = 0
Query:    1 HLLRKSTYNPWGKPGSGAPLRQADGALVTNVKAYHRAKKQGLIAQDLSPNEITDNEQPFGFPLTDAGDQPGVRSPLRTSRS------GGFGHESASAISARPSESAVSLSPPRRRYVFERLPPEEQTDIDRRLKERRDLEVALLGQVEEKRLRKEREVAAKRAEDEIDRIKVLRVLAEERDARHGRVRDKNLKAGEAIPTPYAGTTRR------LPVHQAHAMEHFRSTAAAPHQLGSSEAKQRYANRRGERRNRGNDASAGAVSFGRQESFRRE---EGYGDDIG-------GRGSGQAGFGGDGGDRSRILLILRRLEDHGKMLEKLASQMAT-----EKATRET 320
            H L+ +TYNPWGKPGSGAPLRQADGALVTNVKAYHRAK++GLIAQDLSPNEI DNEQPFG+ LT     P  RSPLRTSRS      G  G +   +I A      VSLSPPR RY F+RLPPEEQ+ +DRR+KER++LE ALL QVEEKR                   +VLRVLAEER A   RVRDKNL+AGEA P    G+          P  Q H  E          Q G++  +QR       R ++  +AS  A   G Q    R     G G  +G       GR +GQ    G   DR+R+LLILRRLEDHG+ L  L  Q++T      KA R+T
Sbjct:   64 HELQSATYNPWGKPGSGAPLRQADGALVTNVKAYHRAKQRGLIAQDLSPNEIGDNEQPFGYTLTTKS-IPEDRSPLRTSRSAACAATGRVGEQGLRSIDA----VTVSLSPPRNRYRFDRLPPEEQSYLDRRIKERQELEAALLSQVEEKRXXXXXXXXXXXXXXXXXXXRVLRVLAEERAANRHRVRDKNLRAGEAPPALSPGSGGAGDHGWPSPQRQLHRNEQ---------QAGTTPQRQR-------RNSKFEEASCAARPRGGQNGVGRATRLSGGGGWMGDGAVGGAGRAAGQEAAMGGEVDRNRVLLILRRLEDHGRTLRNLL-QLSTPGRCQSKADRKT 388          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8108.16303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHV2_9PHAE7.830e-7251.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGW5_ECTSI6.540e-6949.28Similar to centrosome spindle pole associated prot... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8108contigS-dermatodea_contig8108:3273..8906 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8108.16303.1mRNA_S-dermatodea_contig8108.16303.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8108 3273..8906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8108.16303.1 ID=prot_S-dermatodea_contig8108.16303.1|Name=mRNA_S-dermatodea_contig8108.16303.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=378bp
HLLRKSTYNPWGKPGSGAPLRQADGALVTNVKAYHRAKKQGLIAQDLSPN
EITDNEQPFGFPLTDAGDQPGVRSPLRTSRSGGFGHESASAISARPSESA
VSLSPPRRRYVFERLPPEEQTDIDRRLKERRDLEVALLGQVEEKRLRKER
EVAAKRAEDEIDRIKVLRVLAEERDARHGRVRDKNLKAGEAIPTPYAGTT
RRLPVHQAHAMEHFRSTAAAPHQLGSSEAKQRYANRRGERRNRGNDASAG
AVSFGRQESFRREEGYGDDIGGRGSGQAGFGGDGGDRSRILLILRRLEDH
GKMLEKLASQMATEKATRETPAAKVGLRTNPKHLSPSAYLPTEDWSIATP
HPCDRVASSSLSPLFRTFHDDEDQLDR*
back to top