mRNA_S-dermatodea_contig809.16280.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: D8LMQ7_ECTSI (PF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMQ7_ECTSI) HSP 1 Score: 386 bits (992), Expect = 4.600e-130 Identity = 206/232 (88.79%), Postives = 218/232 (93.97%), Query Frame = 2
Query: 143 DDTTLIKSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLVVR 838
D+ LI+SLKDELVEMKKKAVANQKLMLDISHENKRLSEPLT ALTDVAELHAHLRGQEKDR+SL NAKARLRVIDEQLSE+RDSH+ELE DFA+VVEERDQLYDTFEGAVRA+QQKSDFRNLALEQRM +VEESIERAG QLTQIVTAAKLDPPEVDRVMTGLEEVLTAKN AI DLQYAFVRTAKGYNDSLRTY++KL ACGVP E+I +MGFAP TSTSLGPAGLVVR
Sbjct: 248 DNLKLIRSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTVALTDVAELHAHLRGQEKDRMSLTNAKARLRVIDEQLSEVRDSHKELEVDFARVVEERDQLYDTFEGAVRAIQQKSDFRNLALEQRMSSVEESIERAGVQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNGAISDLQYAFVRTAKGYNDSLRTYTAKLKACGVPAEDIASMGFAPYTTSTSLGPAGLVVR 479
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: A0A6U1LPM2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LPM2_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.210e-74 Identity = 125/220 (56.82%), Postives = 167/220 (75.91%), Query Frame = 2
Query: 176 ELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLVV 835
E+ EMKKKA+ANQKLM DIS ENKRLSEPL A+ +VAEL L+ +EKD LSL NAKAR V+++QL +++ HR LEA F + +ERD+LYD+FE +++AVQQ+SDFRNL LE ++ +EE I++A +QL +IV AA LD EV ++ L+E++ AKN I+DLQY+ +R KGYND+LRTY+ KL G+P +EI+AMGF+ AT TS+ PAGLVV
Sbjct: 1 EVAEMKKKAIANQKLMYDISQENKRLSEPLAVAVAEVAELKGQLKDREKDLLSLNNAKARYHVLEDQLLSLQEEHRSLEAKFRSIEKERDELYDSFETSIKAVQQRSDFRNLILESKLQGMEEGIDKATSQLNEIVEAAALDQEEVGHIVGSLDEMVAAKNAIIKDLQYSVLRMTKGYNDALRTYTEKLVEIGIPKDEIEAMGFSTWATLTSVAPAGLVV 220
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: F0XWV6_AURAN (GAS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWV6_AURAN) HSP 1 Score: 237 bits (604), Expect = 1.350e-71 Identity = 126/232 (54.31%), Postives = 171/232 (73.71%), Query Frame = 2
Query: 143 DDTTLIKSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLVVR 838
D+ LIKSLKDE+ EMKKKAVANQKLM DIS EN RL EPLT A+ +VAEL A L+ ++KDRLSL N++ARL+V+++QL ++ +SH L+ +A V + RD+LY+TFE ++ +QQKSDF N+ LEQ++ T++ S+E A Q+ QI++AA LD E++ V LE L +N +IRD +Y +R K YNDSLRTY+ KL G+P EID+MGF+ + TS S GPAGLVV+
Sbjct: 254 DNLKLIKSLKDEVAEMKKKAVANQKLMHDISQENMRLKEPLTVAVAEVAELRAQLKDRQKDRLSLRNSRARLQVLEQQLRDLVESHEALKLGYAAVEKARDELYNTFEASIGQIQQKSDFANVMLEQKLSTMQHSVENAAEQVAQIISAAGLDAAEMEGVGASLENTLAGRNQSIRDTRYELIRMTKVYNDSLRTYTQKLIELGIPANEIDSMGFSAIPTSASSGPAGLVVK 485
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: A0A835YLL1_9STRA (Growth-arrest-specific micro-tubule binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL1_9STRA) HSP 1 Score: 223 bits (568), Expect = 2.860e-66 Identity = 123/231 (53.25%), Postives = 165/231 (71.43%), Query Frame = 2
Query: 143 DDTTLIKSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLVV 835
D+ LI+SLKDELVEMKKKAVANQ+LM DI ENKRL+EPL A+ +V +L A LR QEKDRLSL NA+ARLR +++L E+ +++ E + +F ERD+LY++FEGAVR VQQ+SDFRNL LE+++ +E IER+G +L + AA L P +V RV L+ L A+ + DL+ +R +K Y+D+LRT + +L A GVP E A+GFAP A +T+ GPAGLVV
Sbjct: 247 DNLRLIRSLKDELVEMKKKAVANQRLMADIGEENKRLTEPLLAAVAEVGDLRARLRDQEKDRLSLANARARLRKYEQELEELGEAYAEAQREFEATEGERDELYESFEGAVRGVQQRSDFRNLMLERKVSALEAGIERSGARLGEAAAAAGLAPDDVARVAGALDAALAARARGVGDLRAELLRASKAYDDALRTCARRLEAAGVPRGEAAALGFAPAACATATGPAGLVV 477
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: A0A6V1SRB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SRB9_HETAK) HSP 1 Score: 218 bits (554), Expect = 3.270e-64 Identity = 122/232 (52.59%), Postives = 158/232 (68.10%), Query Frame = 2
Query: 143 DDTTLIKSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLVVR 838
D+ LIKSLKDE+ E K KAVANQKLM DIS ENK LSEPL A+ VA L L+ + KD LSL +A+AR + +L + + H L+ A ERD L++ FE +VRAVQQKSDFRNL LE R+ + E +E+A QL ++V AA LD EV +M L+E++ AK ++DLQY+ +R +KGYND+LRTY+ K+ G+P EEIDAMGF P T T+ GPAGLVV+
Sbjct: 249 DNLKLIKSLKDEVQESKNKAVANQKLMYDISQENKELSEPLAAAVAAVAGLRGQLKDRAKDELSLRHARARSAALAGRLRTLAEEHARLKETCASAEHERDDLHEGFEASVRAVQQKSDFRNLLLESRLQAMGEGLEKASAQLQEVVEAANLDREEVAHLMGSLDEMVAAKGAVVKDLQYSVLRCSKGYNDALRTYTEKMLKIGIPQEEIDAMGFGPAQTITTEGPAGLVVK 480
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: A0A1W0A1Z2_9STRA (Sporangia Induced Dynein Regulatory Complex Protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1Z2_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.190e-61 Identity = 113/233 (48.50%), Postives = 156/233 (66.95%), Query Frame = 2
Query: 140 KDDTTLIKSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLVVR 838
KD+ LI+SLK E+ EMKKKA+AN KLM DISHENKRLSEPL A+ +V L L+ ++KDRLSL NAKARL ++ +Q S+++ H+EL + + R+ LYD+FE + +Q K +++NL LEQR+ + E + QL I+ AA L+ EV RV L+ +L KN IRDLQY + +K YND+LRTY K+ G+P E+I +GF P+ T+TS+GPAGLV +
Sbjct: 104 KDNLRLIESLKKEITEMKKKAIANTKLMHDISHENKRLSEPLAAAVQEVERLKHELKDEQKDRLSLRNAKARLILLGKQRSQLKKEHQELTQAYKTLEANRNALYDSFEHTIHTIQTKGEYKNLVLEQRLSSFGEQHNKKQAQLDDILQAANLEAGEVRRVTEKLDNMLATKNGRIRDLQYQVAKASKAYNDALRTYEGKMQELGIPDEDIRTLGFNPLLTTTSVGPAGLVAK 336
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: A0A024USX7_9STRA (GAS domain-containing protein n=13 Tax=Aphanomyces TaxID=100860 RepID=A0A024USX7_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.940e-60 Identity = 115/233 (49.36%), Postives = 158/233 (67.81%), Query Frame = 2
Query: 140 KDDTTLIKSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLVVR 838
KD+ LI SLK E+ +MKKKA AN KLM DISHENKRLSEPL A+ +V L L+ ++KDRLSL NAKARL ++++QL ++R H+ L + + R+ LYD+FE + +VQ K +++NL LEQR+ E + QL +I+ AA L+ EV RV L+ +LT KNT IRDLQY + +K YND+LRTY SK+ G+P E+I +GF P+ T+TS+GPAGL+ +
Sbjct: 244 KDNLRLIDSLKREISDMKKKATANAKLMHDISHENKRLSEPLAAAVQEVERLKHGLKDEQKDRLSLRNAKARLVLLEKQLVDLRKKHQSLTQAYKTMEASRNALYDSFEHTIHSVQTKCEYKNLVLEQRLSAYGEQHNKKQAQLDEILMAAHLESGEVARVTEKLDTLLTTKNTKIRDLQYQVAKASKAYNDALRTYESKMRDFGLPDEDIRTLGFTPLLTATSVGPAGLLTK 476
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: A0A2D4CD87_PYTIN (Sporangia Induced Dynein Regulatory Complex Protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CD87_PYTIN) HSP 1 Score: 204 bits (518), Expect = 6.900e-59 Identity = 110/231 (47.62%), Postives = 157/231 (67.97%), Query Frame = 2
Query: 140 KDDTTLIKSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLV 832
KD+ LI SLK+E+ MKKKA AN KLM D+S ENKRLSEPL AL +V L L+ ++KD+LSL NAKARL + +Q+SE++D EL A + + +RD LYDTFE V + +K + +NL LEQR+ T+++ R QL +++ AA L+P RV+ L++VL KN +R+LQY+ + +K +ND LRT++ KL G+P +EI A+GF+PVA + ++ PAGLV
Sbjct: 246 KDNLRLIDSLKNEIAAMKKKAAANAKLMHDVSQENKRLSEPLAAALQEVEHLRHELKDEQKDKLSLRNAKARLLYLAQQVSELKDKQTELRAQYKALENDRDLLYDTFEQTVATIHKKGECKNLILEQRLATMDDQHSRKEMQLQELLAAANLEPSAARRVLESLDQVLETKNAHVRELQYSVAKASKTFNDMLRTFTEKLTQFGIPEDEIRALGFSPVAANPNVNPAGLV 476
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: A0A067CHZ1_SAPPC (GAS domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHZ1_SAPPC) HSP 1 Score: 203 bits (516), Expect = 1.250e-58 Identity = 111/233 (47.64%), Postives = 156/233 (66.95%), Query Frame = 2
Query: 140 KDDTTLIKSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLVVR 838
KD+ LI+SLK E+ EMKKKA AN KLM DISHENKRLSEPL A+ +V L L+ ++KD+LSL NAKARL ++ +Q +++ H+EL + + R+ LYD+FE + VQ K +++NL LEQR+ + E + QL +I+ AA L+ EV RV L+ +L+ KN +RDLQY + +K YND+LRTY K+ G+P E+I +GF P+ T+TS+GPAGLV +
Sbjct: 243 KDNLRLIESLKKEIAEMKKKAAANTKLMHDISHENKRLSEPLAAAIQEVERLKHELKDEQKDKLSLRNAKARLVLLGKQRVQLKKEHQELLHAYKTLEAGRNALYDSFEHTIHTVQTKGEYKNLVLEQRLSSFSEQHNKKQAQLDEILQAAHLEAGEVRRVTEKLDTMLSTKNAKVRDLQYQVAKASKAYNDALRTYEGKMSDLGIPDEDIRTLGFNPLLTTTSVGPAGLVAK 475
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Match: A0A7S4B572_CHRCT (Hypothetical protein n=2 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S4B572_CHRCT) HSP 1 Score: 204 bits (518), Expect = 3.650e-58 Identity = 110/227 (48.46%), Postives = 156/227 (68.72%), Query Frame = 2
Query: 155 LIKSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTEALTDVAELHAHLRGQEKDRLSLVNAKARLRVIDEQLSEIRDSHRELEADFAKVVEERDQLYDTFEGAVRAVQQKSDFRNLALEQRMGTVEESIERAGTQLTQIVTAAKLDPPEVDRVMTGLEEVLTAKNTAIRDLQYAFVRTAKGYNDSLRTYSSKLGACGVPGEEIDAMGFAPVATSTSLGPAGLVV 835
LI+SLK+E+ EMKKK +AN+KLM +I+ ENK+LSEPLT AL +V +L L +KD++SL NAK+RL V++ QL ++ H LE + V +ERD+LY+ FE + VQQKS F+N+ LE++M + +S+E+ QL++++ AA LDP + V L++VL AKN A++DLQY R K +ND +R Y SKL G+P EE+ GF P+ T+T GPAGLVV
Sbjct: 335 LIRSLKEEVSEMKKKEIANEKLMFEIAQENKKLSEPLTRALKEVEKLRHELANYQKDKMSLQNAKSRLHVLETQLRDLTWEHEVLEQRYHHVEKERDELYEKFESTIYDVQQKSGFKNILLERKMQAINQSLEKKDAQLSEVLAAANLDPNMLGAVSKKLDDVLDAKNAAVKDLQYELARVTKAHNDVIRVYESKLTEFGIPVEEL---GFRPLVTTTGTGPAGLVV 558 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig809.16280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig809.16280.1 >prot_S-dermatodea_contig809.16280.1 ID=prot_S-dermatodea_contig809.16280.1|Name=mRNA_S-dermatodea_contig809.16280.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=248bp MISPTTTSRQDTGRKDDTTLIKSLKDELVEMKKKAVANQKLMLDISHENKback to top mRNA from alignment at S-dermatodea_contig809:3436..7026- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig809.16280.1 ID=mRNA_S-dermatodea_contig809.16280.1|Name=mRNA_S-dermatodea_contig809.16280.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3591bp|location=Sequence derived from alignment at S-dermatodea_contig809:3436..7026- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig809:3436..7026- >mRNA_S-dermatodea_contig809.16280.1 ID=mRNA_S-dermatodea_contig809.16280.1|Name=mRNA_S-dermatodea_contig809.16280.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1488bp|location=Sequence derived from alignment at S-dermatodea_contig809:3436..7026- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |