prot_S-dermatodea_contig80697.16253.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig80697.16253.1
Unique Name	prot_S-dermatodea_contig80697.16253.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	120

Homology

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: A0A8F0JZU4_9PHAE (Sec-independent protein translocase component TatC n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZU4_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 3.330e-50
Identity = 86/119 (72.27%), Postives = 107/119 (89.92%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKKKKISI 119
            YFILIPAALNFF+FY SEV+EPF SF+QYF+FVS LFFST LVFQ+PI+Q++LSL +++DP+ MLN WRPMIL ST+LGAILTPSADPITQLLLS ALFFLYFLG+ +++ + KK+++I
Sbjct:  142 YFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKLIDPIKMLNYWRPMILLSTVLGAILTPSADPITQLLLSGALFFLYFLGSLISINLTKKEVTI 260

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: A0A0R6LUQ7_UNDPI (Sec-independent protein translocase component n=24 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUQ7_UNDPI)

HSP 1 Score: 168 bits (425), Expect = 6.490e-50
Identity = 86/117 (73.50%), Postives = 105/117 (89.74%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKKKKI 117
            YF+LIPAALNFF+FY SEV+EPF SF QYF+FVSTLFFST LVFQ+PI+Q++LSL +++DP+ MLN WRPMILFSTILGA+LTPSADPITQLLLSSALF LYFLG+  ++ + KK++
Sbjct:  143 YFLLIPAALNFFIFYGSEVIEPFWSFTQYFNFVSTLFFSTGLVFQVPIVQIILSLSKIIDPIKMLNYWRPMILFSTILGAVLTPSADPITQLLLSSALFLLYFLGSITSINLVKKEV 259

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: A0A8F0JYG0_9PHAE (Sec-independent protein translocase component TatC n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYG0_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 9.450e-50
Identity = 89/114 (78.07%), Postives = 104/114 (91.23%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKK 114
            Y++LIPAALNFF+FY+SEVLEPFLSFN+YF+F STLFFSTALVFQLPIIQ+LLS+F+V++P  M+  WR MIL STILGAILTPSADPITQLLLSSALF LY LGTNV++Y+ K
Sbjct:  142 YYLLIPAALNFFIFYSSEVLEPFLSFNEYFNFASTLFFSTALVFQLPIIQILLSVFKVINPRIMIEYWRAMILLSTILGAILTPSADPITQLLLSSALFILYILGTNVSIYLTK 255

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: A0A141BSG3_9PHAE (TatC n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSG3_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 2.300e-49
Identity = 85/116 (73.28%), Postives = 104/116 (89.66%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKKKK 116
            YF+LIPAA+NFF+FY SEV+EP  SFNQYF+FVS LFFST LVFQ+PI+Q++LSLF++VDP+ M N WRPMILFSTILGAILTPSADPITQLLLSSALF LYF+G+ +++ + KK+
Sbjct:  143 YFLLIPAAINFFIFYGSEVIEPLWSFNQYFTFVSALFFSTGLVFQVPIVQIILSLFKIVDPIKMFNYWRPMILFSTILGAILTPSADPITQLLLSSALFLLYFIGSLISINLIKKQ 258

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: A0A7U1AQM0_9PHAE (Sec-independent protein translocase component TatC n=4 Tax=Laminariales TaxID=2886 RepID=A0A7U1AQM0_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.490e-48
Identity = 84/117 (71.79%), Postives = 104/117 (88.89%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKKKKI 117
            YF+LIPAALNFF+FY +EV+EPF SF QYF+FVSTLFFST LVFQ+PI+Q++LSL ++VDP+ MLN WRPMILFSTILGA+LTPSADPITQLLLS ALF LYFLG+  ++ + K+++
Sbjct:  143 YFLLIPAALNFFIFYGAEVIEPFWSFTQYFNFVSTLFFSTGLVFQVPIVQIILSLSKIVDPIKMLNYWRPMILFSTILGAVLTPSADPITQLLLSGALFLLYFLGSITSINLVKREV 259

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: A0A8F0F9L1_9PHAE (Sec-independent protein translocase component TatC n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9L1_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 1.260e-47
Identity = 86/116 (74.14%), Postives = 103/116 (88.79%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKKKK 116
            YF+LIPAALNFF+FY SEV+EPF SF QYF+FVSTLFFST LVFQ+PI+QV+LSL +++DP  ML+ WRPMILFSTILGAILTPSADPITQLLL+ ALFFLYFLG+  ++ + KK+
Sbjct:  143 YFLLIPAALNFFIFYGSEVVEPFWSFTQYFNFVSTLFFSTGLVFQVPIVQVILSLSRLIDPKKMLDYWRPMILFSTILGAILTPSADPITQLLLAGALFFLYFLGSITSINLIKKE 258

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: A0A2R4QPY8_9PHAE (Sec-independent protein translocase component TatC n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY8_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.530e-47
Identity = 85/117 (72.65%), Postives = 101/117 (86.32%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKKKKI 117
            YF+LIPAALNFF+FY SEV+EP  SFNQYF+FVS LFFST LVFQ+PI+QV+LSL +++DP+ M N WRPMILFSTILGA+LTPSADPITQLLLSSALF LY LG+  ++ + KK I
Sbjct:  143 YFLLIPAALNFFVFYGSEVIEPLWSFNQYFNFVSALFFSTGLVFQVPIVQVILSLSKIIDPIKMFNYWRPMILFSTILGAVLTPSADPITQLLLSSALFLLYILGSITSINLIKKPI 259

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: A0A2I4Q2T2_9PHAE (Sec-independent protein translocase component TatC n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2T2_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.980e-46
Identity = 82/114 (71.93%), Postives = 98/114 (85.96%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKK 114
            YFILIPAALNFF+FY+SEVLEPFLSF +Y++FV++LF ST LVFQLPI+Q++ S   +++P  MLN WRPMIL STILGAILTPSADPITQLLLS ALF LYFLGT  ++Y+ K
Sbjct:  143 YFILIPAALNFFIFYSSEVLEPFLSFEEYYNFVASLFISTGLVFQLPIVQIIFSFANIINPTQMLNLWRPMILLSTILGAILTPSADPITQLLLSLALFLLYFLGTTTSIYLTK 256

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: A0A5A4MKB0_9PHAE (Sec-independent periplasmic protein translocase n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MKB0_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 1.030e-44
Identity = 83/117 (70.94%), Postives = 99/117 (84.62%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKKKKI 117
            YF+L+PAALNFFL Y S+V+EP  SF QYFSFVSTLF S  LVFQ+PIIQV+LS+ +++DPV ML  WRPMILF T+LGAILTPSADPITQLLLSSALFFLYFLG+  ++ +  KK+
Sbjct:  150 YFLLVPAALNFFLLYGSDVVEPLWSFTQYFSFVSTLFVSAGLVFQVPIIQVMLSVSRIIDPVKMLGYWRPMILFCTMLGAILTPSADPITQLLLSSALFFLYFLGSLTSINLINKKL 266

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BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Match: D1J7B2_ECTSI (Sec-independent periplasmic protein translocase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7B2_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 1.460e-44
Identity = 82/117 (70.09%), Postives = 98/117 (83.76%), Query Frame = 0

Query:    1 YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQVLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFFLYFLGTNVALYIKKKKI 117
            YF+L+PAALNFFL Y S+V+EP  SF QYFSFVSTLF S  LVFQ+PIIQ++LS+ +++DPV ML+CWRPMIL  TILGAILTPSADPITQLLLSSALF LYFLG+  ++ I  K +
Sbjct:  150 YFLLVPAALNFFLIYGSDVVEPLWSFTQYFSFVSTLFVSAGLVFQVPIIQIMLSVSRIIDPVEMLSCWRPMILLCTILGAILTPSADPITQLLLSSALFLLYFLGSITSINIINKNL 266

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig80697.16253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8F0JZU4_9PHAE	3.330e-50	72.27	Sec-independent protein translocase component TatC...	[more]
A0A0R6LUQ7_UNDPI	6.490e-50	73.50	Sec-independent protein translocase component n=24...	[more]
A0A8F0JYG0_9PHAE	9.450e-50	78.07	Sec-independent protein translocase component TatC...	[more]
A0A141BSG3_9PHAE	2.300e-49	73.28	TatC n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141...	[more]
A0A7U1AQM0_9PHAE	1.490e-48	71.79	Sec-independent protein translocase component TatC...	[more]
A0A8F0F9L1_9PHAE	1.260e-47	74.14	Sec-independent protein translocase component TatC...	[more]
A0A2R4QPY8_9PHAE	2.530e-47	72.65	Sec-independent protein translocase component TatC...	[more]
A0A2I4Q2T2_9PHAE	1.980e-46	71.93	Sec-independent protein translocase component TatC...	[more]
A0A5A4MKB0_9PHAE	1.030e-44	70.94	Sec-independent periplasmic protein translocase n=...	[more]
D1J7B2_ECTSI	1.460e-44	70.09	Sec-independent periplasmic protein translocase n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 1..94 e-value: 1.9E-19 score: 70.3
IPR002033	Sec-independent periplasmic protein translocase TatC	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 1..116
None	No IPR available	PANTHER	PTHR30371:SF5		coord: 1..116
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 113..119
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..16
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 68..86
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 92..112
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 87..91
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..56
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 57..67
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 17..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..16
None	No IPR available	TMHMM	TMhelix		coord: 89..111
None	No IPR available	TMHMM	TMhelix		coord: 65..84
None	No IPR available	TMHMM	TMhelix		coord: 34..56
None	No IPR available	TMHMM	TMhelix		coord: 2..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig80697	contig	S-dermatodea_contig80697:425..784 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig80697.16253.1	mRNA_S-dermatodea_contig80697.16253.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig80697 425..784 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig80697.16253.1 ID=prot_S-dermatodea_contig80697.16253.1|Name=mRNA_S-dermatodea_contig80697.16253.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=120bp
YFILIPAALNFFLFYASEVLEPFLSFNQYFSFVSTLFFSTALVFQLPIIQ
VLLSLFQVVDPVNMLNCWRPMILFSTILGAILTPSADPITQLLLSSALFF
LYFLGTNVALYIKKKKISI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002033	TatC