mRNA_S-dermatodea_contig803.16214.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE) HSP 1 Score: 107 bits (266), Expect = 3.150e-23 Identity = 56/146 (38.36%), Postives = 88/146 (60.27%), Query Frame = 1
Query: 4 PSRCLDAFTIALNEACEGKRWFASTKQLQLASVEFCAACRTVATLCLCAEVCTPKHLWT-DNTGPATRN-----AQKLRSSRVPCLRFHKVVWYLPTSALAWARLRFSGLEQLFLVGGMHSLVDKVVWPCGLQQLTFWEAFNYPIA 423
PSRCLDAF +ALN+AC+G W+ ST+QLQL+S+ FC ACR+V T+ L + TP L++ D+ A R+ ++++ ++RVP LR KV W L + S +E L ++ +D+ VW G++ L+ + F+ PI+
Sbjct: 27 PSRCLDAFKVALNQACDGGGWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQLSGETPRCTGVGLSSVELFVLGDAVNDSMDEAVWSDGMRSLSLGQMFDQPIS 172
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI) HSP 1 Score: 102 bits (254), Expect = 2.150e-22 Identity = 59/138 (42.75%), Postives = 80/138 (57.97%), Query Frame = 1
Query: 4 PSRCLDAFTIALNEACEGKRWFASTKQLQLASVEFCAACRTVATLCLCAEVC-TPKHLWTDNTGPATRNAQKLRSSR-VPCLRFHKVVWYLPTSALAWARLRFSGLEQLFLVGGMHSLVDKVVWPCGLQQLTFWEAFN 411
P RCL+AF +ALN +C+G W+ STK+LQLAS++FC CR V +L L P LW D+ R K S+ VP R +V W P L+ L F+ +E+ FLV ++VD VVWPC L++L F E F+
Sbjct: 4 PGRCLEAFAVALNTSCDGNVWYTSTKELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATEARTGAKRPSTTPVPVFRPREVTWGRPAWLLSDICLVFAKVER-FLVR-QDTVVDDVVWPCRLKKLFFGEGFD 139
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 6.170e-19 Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 1
Query: 7 SRCLDAFTIALNEACEG--KRWFASTKQLQLASVEFCAACRTVATLCLCAEVCTPKHLWTDNTG---PATRNAQKLRSSRVPCLRFHKVVWYLPTSALAWARLRFSGLE------QLFLVGG--MHSLVDKVVWPCGLQQLTFW 399
+RCLDAF IAL++ACEG KRW+AST +LQL S++ C ACRT + L + + TP+ LW+ T P TR+ SSRVP +R ++ W L AL LR + +E +L L+G + SL +VVWP GL QL +
Sbjct: 9 TRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEAL----LRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLY 148
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: D7G241_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G241_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 1.220e-18 Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 7 SRCLDAFTIALNEACEGKRWFASTKQLQLASVEFCAACRTVATLCLCAEVCTPKHLWTDN--------TGPATRNAQKLRSSRVPCLRFHKVVWYLPTSALAWARLRFSGLEQLFLVGGMHS--LVDKVVWPCGLQQL 390
S+CL+AF +AL+ C+G++W+AST+QLQLAS++ C ACR V TL L E TP++LW + TG A + R+ RVP +V+W L L AR Q L G H+ + D WP GL++L
Sbjct: 10 SQCLEAFVVALDLTCDGEKWYASTQQLQLASLDLCKACRGVPTLALSVERSTPEYLWAEAARGPRGRLTGEKKPPAARTRT-RVPPFGPRRVMWKLRARELGLARKELWANVQCLLFTGYHNDWVCDGFSWPTGLKRL 146
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 5.290e-17 Identity = 50/131 (38.17%), Postives = 72/131 (54.96%), Query Frame = 1
Query: 7 SRCLDAFTIALNEACEGKRWFASTKQLQLASVEFCAACRTVATLCLCAEVCTPKHLWTDNTGPATRNAQKLRSSRVPCLRFHKVVWYLPT-SALAWARLRFSGLEQLFLVGGMHSLVDKVVWPCGLQQLTF 396
S CL T+ALNE C+GK W+ STK+LQLAS+E C ACR TL L + TP+ L P+ + ++L +RVP LR + W +PT S + + ++ L H +D +VWP L+ + F
Sbjct: 134 SSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSP-HPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEF 263
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 7.030e-17 Identity = 59/146 (40.41%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 7 SRCLDAFTIALNEACEG--KRWFASTKQLQLASVEFCAACRTVATLCLCAEVCTPKHLWTDNTGPATRNAQ--KLRS-SRVPCLRFHKVVWYLPTSALAW--ARLRFSGLEQLFLVGGMHSL-VDKVVWPCGLQQLTFWEAFNYPI 420
+R DAF IAL++ACEG KRW+ ST +LQL S++ C ACR+ TL + TP LW+ T A N Q K+R SRVP +R ++ W L A +S E+L +VG + + + VVWP GL QL F+ P+
Sbjct: 7 TRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPM 152
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 3.510e-16 Identity = 54/139 (38.85%), Postives = 74/139 (53.24%), Query Frame = 1
Query: 13 CLDAFTIALNEACEGKRWFASTKQLQLASVEFCAACRTVATLCLCAEVCTPKHLWTDNTGPATRNAQKLRSSRVPCLRFHKVVWYLPTSA-LAWARLRFSGLEQLFLVGGMHSLVDKVVWPCGLQQLTF--WEAFNYPI 420
CL+A +AL E +GK W+ STK+LQLAS+EFC ACR TL L +V P+ L GP ++ ++L RVP LR V W +PT+A L L+ L ++ V WP L+ + F + FN PI
Sbjct: 36 CLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPP-QHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPI 173
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 2.050e-15 Identity = 60/163 (36.81%), Postives = 83/163 (50.92%), Query Frame = 1
Query: 4 PSRCLDAFTIALNEACEGKRWFASTKQLQLASVEFCAACRTVATLCLCAEVCTPKHLWTDN-TGPATRNAQKLRSSRVPCLRFHKVVWYLPTSAL------AWARLRFSGL---------------EQLFLVG---GMHSLVDKVVWPCGLQQLTFWEAFNYP 417
PSRCLDA IALN+A G+ W+ ST QLQLAS+E CA+CR++ L L + TP LW T TR+ ++ +RVP +R V W LP AL AW+ + L E+L L+G G + V+ + P ++ L F +F P
Sbjct: 9 PSRCLDALIIALNQASGGE-WYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLLGLGPGFNRSVEHLSLPASVRFLVFGASFXMP 170
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: A0A6H5JF56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF56_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 3.440e-15 Identity = 51/139 (36.69%), Postives = 69/139 (49.64%), Query Frame = 1
Query: 7 SRCLDAFTIALNEACEGKRWFASTKQLQLASVEFCAACRTVATLCLCAEVCTPKHLWTDNTGPATRNAQKLRS-SRVPCLRFHKVVWYLPTSALAWARLRFSGLEQLFLVGGMHSLVDKVVWPCGLQQLTFWEAFNYPI 420
+RCLDAF +ALN++C+GK+W+ S LQLAS+ FC ACR V CL + TP LW GP T + L + +RVP +R +VVW L D + P L+++TF FN I
Sbjct: 34 NRCLDAFVVALNQSCDGKKWYTSIAGLQLASLAFCVACRNVLAPCLTVDKGTPLRLW---CGPCTTPLEVLTTVTRVPAIRVREVVWKLTERK------------------------DGIALPSSLRRITFGRDFNQRI 145
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 6.000e-15 Identity = 56/136 (41.18%), Postives = 73/136 (53.68%), Query Frame = 1
Query: 10 RCLDAFTIALNEACEG--KRWFASTKQLQLASVEFCAACRTVATLCLCAEVCTPKHLWTDNTGPATRNAQKLRSSRVPCLRFHKVVWYLPT-------SALAWARLRFSGLEQLFLVGGMHSLVDKVVWPCGLQQL 390
RCLDAF +AL++ EG KRW+ ST QLQLAS+EFC ACR+ L + + TP LW + G A A S+RVP ++ + W PT S+ W RL L+ + D VVWP GLQ+L
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLW--SLGQANPTAGT--STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANL----DSVVWPQGLQRL 135 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig803.16214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig803.16214.1 >prot_S-dermatodea_contig803.16214.1 ID=prot_S-dermatodea_contig803.16214.1|Name=mRNA_S-dermatodea_contig803.16214.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=317bp DPSRCLDAFTIALNEACEGKRWFASTKQLQLASVEFCAACRTVATLCLCAback to top mRNA from alignment at S-dermatodea_contig803:20316..21267+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig803.16214.1 ID=mRNA_S-dermatodea_contig803.16214.1|Name=mRNA_S-dermatodea_contig803.16214.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=952bp|location=Sequence derived from alignment at S-dermatodea_contig803:20316..21267+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig803:20316..21267+ >mRNA_S-dermatodea_contig803.16214.1 ID=mRNA_S-dermatodea_contig803.16214.1|Name=mRNA_S-dermatodea_contig803.16214.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1902bp|location=Sequence derived from alignment at S-dermatodea_contig803:20316..21267+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |