mRNA_S-dermatodea_contig8023.16207.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig8023.16207.1
Unique Name	mRNA_S-dermatodea_contig8023.16207.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: D8LJC9_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC9_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 3.490e-140
Identity = 278/635 (43.78%), Postives = 360/635 (56.69%), Query Frame = 1

Query:   10 VAMATPEFNEEWRYEGFSTDGEVGIEGAIDSDGNLIIAGVQGYQSYANE-DDTFTNEYAGDFAAVKLLGTSGVEAWAFTSGSLDGEADFFTGVDTDSNNDVILVGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGATGEEIFTVQGGLSYHWDVFKGVSVDSAGDVVAAGTSGYRTSLDFLVVKFSGATGDMIWEYSPY-SSTIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESPGVTKLSGATGAEVWEYEGIAASGAVFWSVAVDPLNGWVVGAGRTEGTWLTGAAQGGFDFAAVVLDGDTGDEVVRYQTGGAGSDYLTFAGFDAAGALFLVGSSDSSGDAEMVGVKLS---LAAEGAGSTTLAEWEIGAIIAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAVVLKQGSFRPMIVGVVGLDPAPSVEVLPVRR--PPSYESATLNMGIEPDPHVPPSPAAVVDVEDRPLPPPLPPRPPPVNQSTPHAFVTVNIEETSPV-----HEETNTPEPPPISPPAETALQRLAKRITKAPSNTTPQSSFRDMPIRAFGPFAP 1878
            ++ A PEF+E WR++G++T  E   +GA+D DGN+++ G QGY +     DDTF + Y+GDFAAVKL G SG   W +T+ SL  EAD F  VDTDSNND+++ G TEGYW++SN   T ++AVVK+DG TGDEIWRYQ     S TS  +   +Y GL +   VA+DG+DN  LVG TY SLV+G GDPGD D+F++KL+G  G EI+TVQGG S  +D    V VDS GD++A G  G   +++ +VVKFSG  G ++WEYSP  SST DV  +V  D+ D+VY+AG +D+LNLQG +AE+P V KL GATG  VW YEG+  S A    VAVD   GWVVGAG TEGTWLTGAAQGG+DFAAVVLDG TGDE+ RYQ G    +YL+F GFD+ G L L GS   +G  E V +K +    +    G+  LA+WEIGAI    A                              +  V   +    P + G V L P P V V  +    PP+                             PLPPP  P   P                         +EE N PEP   + PAE   +RLAKR+ + PS    + ++RD+ +  + P+AP
Sbjct:    1 MSAAIPEFDEVWRWDGWTTLDEHTNDGAVDLDGNVVLVGSQGYAAAEYTIDDTFVDAYSGDFAAVKLEGASGEVLWTWTASSLGSEADTFLAVDTDSNNDIVMGGRTEGYWSSSNPDTTPHIAVVKLDGGTGDEIWRYQEHPPDSYTS--WGNSVYHGLGSVSGVAVDGDDNCLLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESASFDSLHHVKVDSGGDLIAVGIGGDEDAVNVVVVKFSGTDGAVLWEYSPVTSSTHDVPASVDVDTQDDVYIAGGYDALNLQGTLAETPVVLKLDGATGDVVWTYEGVTTSSAGLICVAVDLTTGWVVGAGWTEGTWLTGAAQGGYDFAAVVLDGVTGDELGRYQDGTTDDEYLSFVGFDSVGGLILGGSWTDTGGDEFVAIKFAPWNSSYPTTGTEALAQWEIGAIAGAGALFLLLLGLCIFCFRRKSSQGQQDAAKGSSQIFPV---ENFVGPSVQGEV-LQPRPLVIVSGMGEFAPPAXXXXXXXX--------------------TPLPPPAEPPLSPXXXXXXXXXXXXXXXXXXXXXXXXSYEEMNAPEP--AAAPAEAPWERLAKRVDRVPSKKAFEQNYRDISVSRYAPYAP 607

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: A0A6H5KD80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD80_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 4.150e-136
Identity = 227/420 (54.05%), Postives = 291/420 (69.29%), Query Frame = 1

Query:   10 VAMATPEFNEEWRYEGFSTDGEVGIEGAIDSDGNLIIAGVQGYQSYAN-EDDTFTNEYAGDFAAVKLLGTSGVEAWAFTSGSLDGEADFFTGVDTDSNNDVILVGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGATGEEIFTVQGGLSYHWDVFKGVSVDSAGDVVAAGTSGYRTSLDFLVVKFSGATGDMIWEYSPYSS-TIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESPGVTKLSGATGAEVWEYEGIAASGAVFWSVAVDPLNGWVVGAGRTEGTWLTGAAQGGFDFAAVVLDGDTGDEVVRYQTGGAGSDYLTFAGFDAAGALFLVGSSDSSGDAEMVGVKLS 1263
            +++ATPEF+E WR++G++T  E    GA+DSDG++++ G QGY +  +  DDTF + Y+GDFAAVKL G SG   W +T+ SL  EAD F   DTDSNNDVI+ G TEGYW++SN  +  +LA VK+DGSTGDEIWRYQ     S TS   ++  Y G  +   VA+DG+DN FL G TY SLVFG GDPGD D+F++KL+G  G E++TVQGG S  +D F  V VDS GD++A G  G   +++ +VVKFSG  G ++WEYSP +S T DV  +V  D+ D+VY+AG +D+LNL G +AE+P V KL GATG  VW YEG+  S A F  +AVD   GWVVGAG T GTWLTGAAQGG+DFAAVVLDG TGDE+ RYQ G    DYL+F GFD+ G L + G    +G  E V +K +
Sbjct:    1 MSVATPEFDEVWRWDGWTTSDETLTHGAVDSDGDVVLVGTQGYAAAEDLVDDTFVDAYSGDFAAVKLEGASGEVLWTWTASSLGSEADVFLASDTDSNNDVIMGGTTEGYWSSSNHDSVPHLAAVKLDGSTGDEIWRYQERPPDSYTS--LESFFYYGSGSVLGVAVDGDDNCFLAGQTYGSLVFGEGDPGDSDFFVIKLDGTDGSEMWTVQGGESTSFDAFHNVKVDSGGDLIAVGIGGDEDAVN-VVVKFSGTDGAVLWEYSPVTSFTHDVPQSVDVDTQDDVYIAGGYDALNLHGILAETPVVLKLDGATGDVVWTYEGVNTSSAGFSRIAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVTGDELGRYQDGTTDDDYLSFVGFDSVGGLIIGGQWTDTGGDEFVAIKFA 417

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: D7FKX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX8_ECTSI)

HSP 1 Score: 427 bits (1099), Expect = 6.690e-134
Identity = 229/420 (54.52%), Postives = 291/420 (69.29%), Query Frame = 1

Query:   10 VAMATPEFNEEWRYEGFSTDGEVGIEGAIDSDGNLIIAGVQGYQSYANE-DDTFTNEYAGDFAAVKLLGTSGVEAWAFTSGSLDGEADFFTGVDTDSNNDVILVGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGATGEEIFTVQGGLSYHWDVFKGVSVDSAGDVVAAGTSGYRTSLDFLVVKFSGATGDMIWEYSPY-SSTIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESPGVTKLSGATGAEVWEYEGIAASGAVFWSVAVDPLNGWVVGAGRTEGTWLTGAAQGGFDFAAVVLDGDTGDEVVRYQTGGAGSDYLTFAGFDAAGALFLVGSSDSSGDAEMVGVKLS 1263
            ++ A PEF+E WR++G++T  E   +GA+D DGN+++ G QGY +  +  DDTF + Y+GDFAAVKL G SG   W +T+ SL  EAD F  VDTDSNND+++ G TEGYW++SN  +  ++AVVK+DG TGDEIWRYQ     S TS    +  Y G  +   VA+DG+DN  LVG TY SLV+G GDPGD D+F++KL+G  G EI+TVQGG S  +D    V VDS GD++  G  G   +++ +VVKFSG  G ++WEYSP  SST DV  +V  D+ D+VY+AG +D+LNLQG +AE+P V KL GATG  VW YEG+A S A F SVAVD   GWVVGAG T GTWLTGAAQGG+DFAAVVLDG TGDE+ RYQ G    D L F GFD+ G L L GS   +G+AE V +K +
Sbjct:    1 MSAAFPEFDEVWRWDGWTTLDEHTNDGAVDLDGNVVLVGSQGYAAAEDLLDDTFVDAYSGDFAAVKLEGASGEVLWTWTASSLGSEADMFLAVDTDSNNDIVMGGRTEGYWSSSNPDSVAHIAVVKLDGGTGDEIWRYQEHPPDSYTS--LGSYFYYGYGSVSGVAVDGDDNCLLVGQTYGSLVYGEGDPGDSDFFVIKLDGTDGSEIWTVQGGESASFDSLHHVKVDSGGDLIVVGIGGDEDAVNVVVVKFSGTDGAVLWEYSPVTSSTHDVPASVDVDTQDDVYIAGGYDALNLQGTLAETPVVLKLDGATGDVVWTYEGVATSSAGFRSVAVDLTTGWVVGAGWTTGTWLTGAAQGGYDFAAVVLDGVTGDELGRYQDGTTDDDSLKFVGFDSVGGLILGGSWTDTGEAEFVAIKFA 418

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: D8LJD0_ECTSI (Fibronectin type III domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD0_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 7.170e-124
Identity = 212/370 (57.30%), Postives = 261/370 (70.54%), Query Frame = 1

Query:  157 DDTFTNEYAGDFAAVKLLGTSGVEAWAFTSGSLDGEADFFTGVDTDSNNDVILVGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGATGEEIFTVQGGLSYHWDVFKGVSVDSAGDVVAAGTSGYRTSLDFLVVKFSGATGDMIWEYSPYSS-TIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESPGVTKLSGATGAEVWEYEGIAASGAVFWSVAVDPLNGWVVGAGRTEGTWLTGAAQGGFDFAAVVLDGDTGDEVVRYQTGGAGSDYLTFAGFDAAGALFLVGSSDSSGDAEMVGVKLS 1263
            DDTF + Y+GDFAAVKL G SG   W +T  SL   AD F   DTDSN+DV++ G TEGYW++SN  +  +LA VK+DGSTGDEIWRYQ       T T+  +  Y G  +   VA+DG+DN FLVG T+ SLVFG GD GD D+F++KL+G  G EI+TVQGG S  +D F  V VDSAGD+VA G  G   +++ +VVKFSG  G ++WEYSP +S T DV  +V  D+ D+VY+AG +D+LNL+G++AE+P V KL GATG  VW YEG+A S A F+ VAVDP  GWVVGAG TEGTWLTGAAQGG+DFAAVVLDGDTGDE+ RYQ G    DYL+F GFDA G L L GS   +G  E V +K +
Sbjct:   55 DDTFEDAYSGDFAAVKLDGASGDLLWTWTDSSLGSAADLFLAGDTDSNDDVVMGGRTEGYWSSSNPDSVAHLAAVKLDGSTGDEIWRYQ--EHPPDTYTSLGSYFYYGSGSVTGVAVDGDDNCFLVGQTWGSLVFGEGDAGDSDFFVIKLDGTDGSEIWTVQGGESTSYDFFVDVKVDSAGDLVAIGIGGDEDAINVVVVKFSGIDGSILWEYSPVTSFTHDVPESVDVDTQDDVYLAGGYDALNLEGDLAETPVVLKLDGATGDVVWTYEGVATSRAGFFGVAVDPTTGWVVGAGWTEGTWLTGAAQGGYDFAAVVLDGDTGDEIGRYQDGTTDDDYLSFVGFDAVGGLILGGSWTDTGADEFVAIKFA 422

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: A0A6H5JLD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD3_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 1.350e-97
Identity = 178/399 (44.61%), Postives = 244/399 (61.15%), Query Frame = 1

Query:   31 FNEEWRYEGFSTDGEVGIEGAIDSDGNLIIAGVQGYQSYANEDDTFTNEYAGDFAAVKLLGTSGVEAWAFTSGSLDGEADFFTGVDTDSNNDVILVGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGH--SVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGATGEEIFTVQGGLSYHWDVFKGVSVDSAGDVVAAGTSGYR--TSLDFLVVKFSGATGDMIWEYSPYSSTIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESPGVTKLSGATGAEVWEYEGIAASGAVFWSVAVDPLNGWVVGAGRTEGTWLTGAAQGGFDFAAVVLDGDTGDEVVRYQTGGAGSDYLTFAGFDAAGALFLVG 1215
            F E WRY G++T  E    G +  DGNL++ G     ++  +DDT T+  + DF+AVKL G SG   W +   SL G AD+ T    DS ++VIL G+T G W TSN    R++A VK+DG  G E+WRYQA +  S+         + G    +   VA+D  D+  LVG TYN+LV G G PGD+D+F +KL+G TG E++ VQGG+++  +   G  VDS+GD+VAAG +     + L+FLVVK SG+ G ++WEY+P +++  V H+V  D  ++VYVAG   + N QG +  +  V KL G +G E W Y G    G +  SVA DP+ GWVVGAG  +G W+ GA+ GGFD+AAVVLDGD+G E+ R+Q G  G D L F  FD +G  FL G
Sbjct:   10 FTESWRYAGWTTAQESAAGGVVGGDGNLVLCGKSNGLAFNLDDDTATSTSSADFSAVKLDGDSGETLWTWVDSSLQG-ADWMTSAGADSASNVILGGFTNGEWGTSNLDGLRDIAAVKLDGEAGTEVWRYQAAASTSS---------FGGYGVSYVLGVAVDSTDHPVLVGTTYNNLVDGVGVPGDWDFFAIKLDGMTGGELWRVQGGVAFTREGLLGAKVDSSGDLVAAGYAANEDASELNFLVVKLSGSDGSVLWEYAPSAASGGVFHSVDLDDRNHVYVAGGEGAPNFQGKVGTTAVVLKLDGESGVERWSYRGTGGDGIMLNSVAADPITGWVVGAGGAQGNWVEGASVGGFDYAAVVLDGDSGAELTRWQDGTLGDDVLEFVEFDISGEFFLGG 398

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: D8LJD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD2_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 2.470e-76
Identity = 143/305 (46.89%), Postives = 193/305 (63.28%), Query Frame = 1

Query:  307 VILVGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGATGEEIFTVQGGLSYHWDVFKGVSVDSAGDVVAAGTSGYR--TSLDFLVVKFSGATGDMIWEYSPYSSTIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESPGVTKLSGATGAEVWEYEGIAASGAVFWSVAVDPLNGWVVGAGRTEGTWLTGAAQGGFDFAAVVLDGDTGDEVVRYQTGGAGSDYLTFAGFDAAGALFLVG 1215
            VIL G+T G W  SN    R++A VK+DG  G E+WRYQA +  S++          G++    VA+D  +N  LVG TYNSLV G G PGD+D+F +KL+G TG E++ VQGG+++  +   G  VDS+GD+VAAG +     + L+FLVVK SG+ G ++WEY+P +++  V H+V  D   +VYVAG   + N QG +  +  V KL G +G E W Y G    G +  S+A DP+ GWVVGAG  +G W+ GA+QGGFDFAAVVLDGD+G E+ R+Q G  G D L F  FD +G  FL G
Sbjct:   29 VILGGFTNGEWGASNLDGLRDIAAVKLDGEAGTEVWRYQAAASTSSSGG-------YGVSYVLGVAVDSTNNPVLVGTTYNSLVDGVGVPGDWDFFAIKLDGVTGGELWRVQGGVAFTREGLLGAKVDSSGDLVAAGYAANEDASELNFLVVKLSGSDGSVLWEYAPSTASGGVFHSVDLDDRSHVYVAGGEGAPNFQGKVGTTAVVLKLDGESGVERWSYRGTGGDGIMLNSIAADPITGWVVGAGGAQGDWVEGASQGGFDFAAVVLDGDSGAELTRWQDGTLGDDVLEFVEFDISGEFFLGG 326

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: A0A6H5LD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD60_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 7.640e-73
Identity = 155/324 (47.84%), Postives = 192/324 (59.26%), Query Frame = 1

Query:  235 AFTSGSLDGEADFFTGVDTDSNNDVILVGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGATGEEIFTVQGGLSYHWDVFKGVSVDSAGDVVAAGTSGYRTSLDFLVVKFSGATGDMIWEYSPYSS-TIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESPGVTKLSGATGAEVWEYEGIAASGAVFWSVAVDPLNGWVVGAGRTEGTWLTGAAQGGFDFAAVVLDGDTGDEVVRYQTGGAGSDYLTFAGFDAAGAL 1203
            ++T  SL  EAD F    TDSNN +IL G TEGYW++S    T  L +V          W   A +  S           SG T+G                    LV+G GD GD D+F  KL+G  G EI+T QGG S  +D F+ V V+S GD+VA G SG   ++   VVK SG  G ++WEYSP +S T DV H+V  D+ D+V V G +D+LNLQG+ AE+P V KL GATG   W YEG+A SG  F+ +AVD   GWVVGAG TEGTW+TGAAQGG+D AAV+LDG TG+E+ RYQ G    DYL FAGFD+AG  
Sbjct:   46 SWTDSSLGSEADVFFAAATDSNNGIILGGRTEGYWSSS----TPELCLV----------WPSTAKTTASC----------SGQTSG-------------------CLVYGEGDAGDCDFFATKLDGTDGSEIWTTQGGASTSFDSFREVVVESTGDLVAVGISGDVYAISIFVVKLSGIDGIVLWEYSPVTSLTHDVPHSVDVDAQDDVNVVGVYDALNLQGSTAETPVVLKLDGATGDVGWTYEGMATSGDGFYDLAVDLTTGWVVGAGWTEGTWVTGAAQGGYDVAAVLLDGVTGNELGRYQNGTTDDDYLAFAGFDSAGGF 326

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: A0A3M1KKL7_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1KKL7_9DELT)

HSP 1 Score: 107 bits (267), Expect = 5.860e-21
Identity = 103/333 (30.93%), Postives = 151/333 (45.35%), Query Frame = 1

Query:    7 LVAMATPEFNEEWRYE--GFSTDGEVGIEGAIDSDGNLIIAGVQGYQSYANEDDTFTNEYAG-DFAAVKLLGTSGVEAWAFT---SGSLDGEADFFTGVDTDSNNDVILVGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGATGEEIFT--VQGGLSYHWDVFKGVSVDSAGDVVAAGTSGYRTSLDFL-VVKFSGATGDMIWEY---SPYSSTIDVLHAVTFDSDDNVYVAGAHDSL----NLQGNIAESPGVTKLSGATGAEVW 957
            +V +     +E WR+E  G +   +     AID  G+++ AG            TF N     DFA VKL G +G E W      S + D EA     V  D++ DV++ G      T S+ A   + AVVK+DG+TG E+WR       +           +G  A + VA+D   NVF VG    S         D D+ ++KL G TG E++   + G      D    V+VD AGDV+AAG     +SLD L V+KF+GATG  +W Y    P  +  +   A+  D+  +V V      +      + +   +  V K+ G +GA +W
Sbjct:  103 VVKLVRVTGSELWRWERSGTAPGLDTAYSVAIDGSGDVLAAG------------TFENSATNADFAVVKLDGATGTELWRREIDGSANTDEEA---AAVVVDASGDVVVAG------TLSSPATQDDFAVVKLDGTTGAELWRVLLDGSAA-----------AGNDAAYDVALDAGGNVFAVGRLKQSS-------SDADFAVVKLAGETGAELWRREIDGLADSGSDGALRVAVDPAGDVIAAGNLYSPSSLDDLAVIKFAGATGGELWRYVSYEPNENPGETATALAIDAGGHVVVGAFLPPVIGVDPWEYSSESTSEVVKIDGGSGAMLW 396

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: A0A7C3NHY2_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3NHY2_9DELT)

HSP 1 Score: 100 bits (248), Expect = 4.970e-18
Identity = 90/305 (29.51%), Postives = 133/305 (43.61%), Query Frame = 1

Query:   91 AIDSDGNLIIAGVQGYQSYANEDDTFTNEYAGDFAAVKLLGTSGVEAWAFTSGSLDGEADFFTGVDTDSNNDVILVGWT--EGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDP-GDYDYFIMKLNGATGEEIF-------TVQGGLSYHWDVF-KGVSVDSAGDVVAAG---TSGYRTSLDFLVVKFSGATGDMIWEYSPYSSTIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESPGVTKLSGATGAEVWEY 963
            A+D+ GN+++AG            T     + DF  VK  G SG E W           D+   V  D   +V+  G T   G W         +  VVK DG+TG ++W+                 I  G    +++A+DG  NV   G T + +     DP GD  + ++K +G TG E++       T  G +  +   +   V+VD+AG+VVAAG        TS +F VVKF GA+G   W     +   D+ +AV  D+  NV  AG  ++ N   +      V K  GATG E+W +
Sbjct:  149 AVDAAGNVVVAG-----------STVNTGSSSDFTVVKFDGASGAELWRQAINGTANGPDWANAVAVDVAGNVVGAGVTYNSGGW---------DFTVVKFDGATGAKLWQKDING------------IEDGFDYANALAVDGAGNVVASGATSDVV-----DPVGDETFTVIKFDGVTGVELWRKVVIPGTFPGSVLANGSGWANAVTVDAAGNVVAAGHIHAHNTGTSSEFTVVKFDGASGAEFWRNMINAGANDLANAVAVDAAGNVTAAGISENPNTGIDFI----VVKFDGATGQELWRH 412

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BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Match: A0A521S4F1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A521S4F1_9BACT)

HSP 1 Score: 94.0 bits (232), Expect = 7.110e-17
Identity = 90/299 (30.10%), Postives = 136/299 (45.48%), Query Frame = 1

Query:   94 IDSDGNLIIAGVQGYQSYANEDDTFTNEYAGDFAAVKLLGTSGVEAWAFTSGSLDGEADFFTGVDTDSNNDVILVGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQTLIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGATGEEIFT-VQGGLSYHWDVFKGVSVDSAGDVVAAG----TSGYRTSLDFLVVKFSGATGDMIWE---YSPYSSTIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESPGVTKLSGATGAEVWEYE 966
            +D+ GN++ AG           +T T++   DFA VK+ G  G E W         E D    V  D   +V+  G+T+      N     +  V+K DG+TG E+WR Q +   +          + G    ++V +DG  NV   G T N+  F        D+ ++K NGA+G E++  V  G ++  D    V+VD AGDVVAAG    T+G  T  DF V+KF G +G  +W    +   + + +   AVT D+  +V  AG   +L      ++   V K   A G  +W  E
Sbjct:   59 VDNVGNVVAAGFI--------TNTGTSQ---DFAVVKVDGAVGAELWHQVIDGTAHEGDVAKAVTVDGAGNVVAAGFTQ------NIGTGNDFTVIKFDGATGAELWR-QVIDGTA----------HEG-DGANAVTVDGAGNVVAAGFTQNTGSF-------QDFTVIKFNGASGAELWRQVIDGTAHDIDEALAVTVDGAGDVVAAGRTRNTAG--TDNDFTVIKFDGTSGAELWRQVIHITRTFSNNQALAVTVDAAGDVVAAGFTTNLFSLSRNSDFT-VIKFDRANGTVLWRQE 318

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig8023.16207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LJC9_ECTSI	3.490e-140	43.78	Fibronectin type III domain protein n=1 Tax=Ectoca...	[more]
A0A6H5KD80_9PHAE	4.150e-136	54.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FKX8_ECTSI	6.690e-134	54.52	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
D8LJD0_ECTSI	7.170e-124	57.30	Fibronectin type III domain protein n=1 Tax=Ectoca...	[more]
A0A6H5JLD3_9PHAE	1.350e-97	44.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LJD2_ECTSI	2.470e-76	46.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LD60_9PHAE	7.640e-73	47.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A3M1KKL7_9DELT	5.860e-21	30.93	Uncharacterized protein (Fragment) n=1 Tax=Deltapr...	[more]
A0A7C3NHY2_9DELT	4.970e-18	29.51	Uncharacterized protein n=1 Tax=Deltaproteobacteri...	[more]
A0A521S4F1_9BACT	7.110e-17	30.10	Uncharacterized protein (Fragment) n=1 Tax=bacteri...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig8023	contig	S-dermatodea_contig8023:2..9503 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Bacteria
Seed ortholog score	73.9
Seed ortholog evalue	2.9e-10
Seed eggNOG ortholog	1122137.AQXF01000001_gene3098
EggNOG free text desc.	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EggNOG OGs	1P31B@1224,2U4EC@28211,COG1520@1,COG1520@2
COG Functional cat.	S
Best tax level	Alphaproteobacteria
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	7
Model size	2913
Cds size	1875
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622925314.6623611-UTR-S-dermatodea_contig8023:1..1024	1622925314.6623611-UTR-S-dermatodea_contig8023:1..1024	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig8023 2..1024 -
1694079849.229337-UTR-S-dermatodea_contig8023:1..1024	1694079849.229337-UTR-S-dermatodea_contig8023:1..1024	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig8023 2..1024 -
1622925314.7514634-UTR-S-dermatodea_contig8023:9488..9503	1622925314.7514634-UTR-S-dermatodea_contig8023:9488..9503	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig8023 9489..9503 -
1694079849.3168352-UTR-S-dermatodea_contig8023:9488..9503	1694079849.3168352-UTR-S-dermatodea_contig8023:9488..9503	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig8023 9489..9503 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622925314.6738343-CDS-S-dermatodea_contig8023:1024..1125	1622925314.6738343-CDS-S-dermatodea_contig8023:1024..1125	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 1025..1125 -
1694079849.2398622-CDS-S-dermatodea_contig8023:1024..1125	1694079849.2398622-CDS-S-dermatodea_contig8023:1024..1125	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 1025..1125 -
1622925314.6829464-CDS-S-dermatodea_contig8023:1605..1707	1622925314.6829464-CDS-S-dermatodea_contig8023:1605..1707	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 1606..1707 -
1694079849.2546966-CDS-S-dermatodea_contig8023:1605..1707	1694079849.2546966-CDS-S-dermatodea_contig8023:1605..1707	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 1606..1707 -
1622925314.6928248-CDS-S-dermatodea_contig8023:2217..2361	1622925314.6928248-CDS-S-dermatodea_contig8023:2217..2361	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 2218..2361 -
1694079849.2706885-CDS-S-dermatodea_contig8023:2217..2361	1694079849.2706885-CDS-S-dermatodea_contig8023:2217..2361	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 2218..2361 -
1622925314.7101073-CDS-S-dermatodea_contig8023:4411..4504	1622925314.7101073-CDS-S-dermatodea_contig8023:4411..4504	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 4412..4504 -
1694079849.2821767-CDS-S-dermatodea_contig8023:4411..4504	1694079849.2821767-CDS-S-dermatodea_contig8023:4411..4504	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 4412..4504 -
1622925314.718535-CDS-S-dermatodea_contig8023:4794..4884	1622925314.718535-CDS-S-dermatodea_contig8023:4794..4884	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 4795..4884 -
1694079849.2909188-CDS-S-dermatodea_contig8023:4794..4884	1694079849.2909188-CDS-S-dermatodea_contig8023:4794..4884	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 4795..4884 -
1622925314.7272627-CDS-S-dermatodea_contig8023:5298..6223	1622925314.7272627-CDS-S-dermatodea_contig8023:5298..6223	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 5299..6223 -
1694079849.2993839-CDS-S-dermatodea_contig8023:5298..6223	1694079849.2993839-CDS-S-dermatodea_contig8023:5298..6223	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 5299..6223 -
1622925314.7367668-CDS-S-dermatodea_contig8023:9068..9488	1622925314.7367668-CDS-S-dermatodea_contig8023:9068..9488	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 9069..9488 -
1694079849.308077-CDS-S-dermatodea_contig8023:9068..9488	1694079849.308077-CDS-S-dermatodea_contig8023:9068..9488	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig8023 9069..9488 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig8023.16207.1	prot_S-dermatodea_contig8023.16207.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig8023 1025..9488 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig8023:2..9503-
coding sequence from alignment at S-dermatodea_contig8023:2..9503-

protein sequence of mRNA_S-dermatodea_contig8023.16207.1

>prot_S-dermatodea_contig8023.16207.1 ID=prot_S-dermatodea_contig8023.16207.1|Name=mRNA_S-dermatodea_contig8023.16207.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=625bp
MATPEFNEEWRYEGFSTDGEVGIEGAIDSDGNLIIAGVQGYQSYANEDDT
FTNEYAGDFAAVKLLGTSGVEAWAFTSGSLDGEADFFTGVDTDSNNDVIL
VGWTEGYWTTSNTANTRNLAVVKVDGSTGDEIWRYQAVSQVSTTSTTFQT
LIYSGLTAGHSVAIDGNDNVFLVGGTYNSLVFGAGDPGDYDYFIMKLNGA
TGEEIFTVQGGLSYHWDVFKGVSVDSAGDVVAAGTSGYRTSLDFLVVKFS
GATGDMIWEYSPYSSTIDVLHAVTFDSDDNVYVAGAHDSLNLQGNIAESP
GVTKLSGATGAEVWEYEGIAASGAVFWSVAVDPLNGWVVGAGRTEGTWLT
GAAQGGFDFAAVVLDGDTGDEVVRYQTGGAGSDYLTFAGFDAAGALFLVG
SSDSSGDAEMVGVKLSLAAEGAGSTTLAEWEIGAIIAGAAILLLLLYLCL
CHSQKKPPEETPPPVVVPVVVPAVVLKQGSFRPMIVGVVGLDPAPSVEVL
PVRRPPSYESATLNMGIEPDPHVPPSPAAVVDVEDRPLPPPLPPRPPPVN
QSTPHAFVTVNIEETSPVHEETNTPEPPPISPPAETALQRLAKRITKAPS
NTTPQSSFRDMPIRAFGPFAPQRR*

mRNA from alignment at S-dermatodea_contig8023:2..9503-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig8023.16207.1 ID=mRNA_S-dermatodea_contig8023.16207.1|Name=mRNA_S-dermatodea_contig8023.16207.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=9502bp|location=Sequence derived from alignment at S-dermatodea_contig8023:2..9503- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGGGGTTTAGTGGCGATGGCGACGCCCGAATTCAACGAGGAATGGCGCTA
CGAGGGCTTTTCAACGGACGGCGAGGTTGGTATTGAGGGCGCAATCGATT
CGGACGGCAACCTTATCATCGCCGGGGTGCAGGGCTACCAGAGTTACGCC
AACGAGGACGACACCTTCACAAACGAGTACGCTGGTGACTTCGCAGCGGT
AAAGTTGCTGGGAACCTCGGGGGTTGAGGCCTGGGCATTCACGTCCGGCT
CTCTCGACGGCGAGGCAGATTTTTTCACTGGCGTGGACACCGACAGCAAC
AACGACGTGATTCTTGTGGGGTGGACGGAGGGCTACTGGACAACATCCAA
CACCGCGAACACAAGAAATTTAGCGGTTGTGAAAGTCGATGGGAGCACAG
GGGACGAGATTTGGAGGTACCAGGCCGTTTCCCAGGTATGGAGTGGAACC
CCGTCTGGTATTGTATTCACATTTATCGCAGAAAAGCGTGTATTTGGCAA
TCGCGTCGGCTCGGTGCCGGTGGCAGTTACCATGGCATCATGCTGTTCGT
ATTGTAGCAGAAGCACCCAGTTCCCCCATATTTTCGTTTTGTGCTCCAGC
GTGAGCTCCTTCCGAGCGATATGCGCACGCCTGCGTGCTTCTGCTGTATC
GTCGTTGAATAACGATAGTACTGTTTTTTTGTTGGCCACCCTTTACGGCT
GTTTCTGACCGAACAAAACACTGTGGGTTTGCGTGTTAATCTCACGTTCG
GAGGAACGCTGTATTTCTAGTCATATATTTTGTAGGCTGAAATGTGGCAA
GTAACATTACAGCAACCTCACGATGTTTGTGATTTTTTCTGCTTTAGAAT
CGCTTCCCTTTTCTTTTAGTTGGTGGTATTAATAGTGTATTAGTGTGGCA
TTGAAAGCCTGCTCCGGGCGTGCGATTCTCTCGGAGCCACACATTTACAT
GGTGCTATTCGCGATCGCCTCTCCAACACCCTCTCGTGTCACGTTTTTCT
CGCATCCCGAAGGGGGGCCCGTTTGCTTCCTAGACTACTTTGGAGGTAAC
GCGCCGCGGCGTAACGCCAACCTCAACACGGCCATCGCCCCCGCCATCCA
CCCAAAGGACCCAGTTTTCATCGCGCATTCGCCGACCAGGTCTACTGCAT
GCGCTCACGATCCACGAGTCATTGTTATCAGGAACCAAGCGTGCTACCTG
TCCGCGAAACGAGTTACCTGCGTTCGATGCCCCGTGACATTATTTTCTGT
GCTGTATGTTTTTTCATGCCGCGCTGGCACTCCCTTGCCAACACCATCAG
GTACTGGGTATCCCGCATTGCTCAACAGGAACCTTGTACGCAATATAGTA
ATAGGTGCAGGTAAAGTTGTCTGGGCTCAATCTCAATCGCTGCCCAGCTC
GCTCTGCAGTCACGATGCACCCGGTTTGCAGAATAATACGATTTCATATT
TTCAAGGCGCAGGTTTGGGCTCTGTTTTTGCGCAAGTCGATACGATATGG
CGAGGGTGACCTGTGCCTACTTCGTTTGGAGTCGATTCTGTAGAGAGTTG
TGCGTACGGCACGCGAATATTGTACATTGTACTTGGCTTCACCACCAAAA
GAGCACATGACGTCGCTCGTTGGCTTGTGCCACAATACGTAGCGGCGTAA
GCGCGACGTGGGTGTGCCCGAGTGTGTGTTTTGGAGCGGCAGGTCAATAT
GGGAAGGGCGACTGAGATGTGGCTTTCAATCCACCACAACTCCGTCAACT
CCCACGTAAGAGACATGCGTTCGTGTGTTCGGAAAAGTCTGTTTATTTTT
TGCGGCGGTCTGCTAGTTGACCACGAGGATCGACTTCCATATTTCGAAGC
GCGAGCTACCGATACATGCGCTTGTTGCGACGATAAGCATGCAAAGGACT
GCCGACATATGTATCTTACGTCGTGGGACCACGAACGAACATAACACACA
CCACGTTGAACGTGCAATTTACGCGATTCACCTCACCTCGCACCCCAAGC
GTGAACAACAAAACATAAATGCCTATAAGTATAAGTTGTAAAATAGTAAA
ACTTGTGGTGGGCGGAACAACGTAGCCCCGCCCCACAAAAAACAAAGATT
TAAAGATCATGGAGCGAGCGTTCGGCTCCCACCTTTCAAAGTATAATATG
ATCCAAGCTACGCCTATGGGGGCTCACTTGTTGCGTATGGTGCTATGGTT
TCAAGTCATGTATGACGCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCC
CGCCGCTCTTGTTGTGGTGTTGGTACGCCTCGCCCCCGCCCGCTGGTGTT
TTGCTTTTGTTGCGGTNNNNNNNNNNAGTAATGTTTTAATAGGTCCATTT
TTTTTATGTTTTTTGGTTTGGGTGGGTTTGTTTGGTTTGGTTGTGGTTTT
TTTTTTTTTGTTTTTGTATATATTTACCCCCCCCCCCCCCCCCCCCCGCG
CGGCCCGCACTGATGTTTTCGTGTGGCGAAACCACGCTTTCCCAGCGTTG
TCGATTGTTTCGCTCATGGAGGTCTTCGATGTACTTCTATTATTCTGTAT
ATGTGTGGGTCCATCGGCGTGGGTCGTTCGGCGAAAGAAGACGCCGGTAT
TGCCATGGTATTTTTAGATTTTTTCCAATTCTTGCTCGTCTCGGGTGTGG
AAAGCAAAGAAAATAGTGATCAGGCCGTTCAGTATATGGTAGGCATCACC
ACGAGGGTTCACGATTCAATTACGACTTTTAATATATCAACATGGATACA
CTAAGTGAAAGGCCCCCACACGGGCCGCATCTGTTAATGCGAAGGCACCA
TGTCGCCAAGATCGCATGAGCAAGATAGCGCCAGTCTTTACCTGATGAAC
GCAACTTAACGTTGTTTAAGGTGCCGCCTCGAGCGCGCAACGAAGGTGTG
GTTGGCAACAGACGTCGATCACTGTCGTTTCGTCCATGCCGCATGAACAT
CGTTGTTTGAGATCTCGCAACCGAGTAACCGTCCTGGCGCATGCACTCCC
AAACGTATGAAATGCCCAAGGCTATAAACGTTCAAATTGCCATTTGAGTT
CCCAACGCTACTGTCGCCATTAGAGCGACGTTGTCAACGCTGTTGTTTTG
GCTGTTGGCACCCCGACCCACTCCGGGGGGCGGGTTCTTCTCCATCTACC
CGGGCTTCCGCGCCATGAAAACAGCCACCCAGCCTTTTAGTCCGTTTGTA
CGCCTCACTTTTAATTTATTAGATGCCCTCTTTACAAATGTTACTGCTCT
GCGTTTGTAACGTATGTTTCTCTTTGCCAGGTCTCGACTACGTCAACGAC
TTTTCAGACCCTGATTTACAGCGGGTTAACGGCCGGTCATAGCGTGGCGA
TCGATGGCAATGATAATGTGTTTCTCGTCGGGGGCACCTACAACAGCTTG
GTGTTCGGAGCGGGCGATCCTGGCGACTACGACTACTTCATCATGAAGCT
AAACGGAGCGACGGGGGAGGAGATCTTTACCGTGCAGGGTGGGCTCAGCT
ATCACTGGGACGTTTTTAAGGGCGTCTCGGTGGACTCGGCGGGAGACGTC
GTTGCCGCGGGTACCTCGGGGTACAGAACCTCGCTAGACTTCCTCGTGGT
AAAATTTAGCGGCGCCACCGGGGACATGATATGGGAGTACTCGCCTTATT
CTTCAACCATTGACGTCTTACACGCGGTCACCTTCGACAGCGATGATAAC
GTGTATGTGGCCGGCGCCCACGACTCCCTGAACCTGCAGGGCAACATAGC
CGAGAGCCCGGGTGTGACGAAGCTGAGCGGCGCTACCGGCGCCGAGGTGT
GGGAATATGAGGGGATAGCGGCATCCGGGGCGGTGTTCTGGAGTGTCGCC
GTAGACCCTTTGAACGGCTGGGTGGTGGGCGCCGGGCGGACGGAAGGAAC
GTGGCTGACGGGCGCGGCTCAGGGAGGCTTCGATTTTGCCGCGGTGGTGT
TGGACGGGGATACAGGAGACGAGGTCGTCCGGTATCAGACTGGAGGCGCT
GGTAGTGATTATCTGACCTTCGCGGGCTTCGACGCCGCGGGTGCGCTCTT
CCTCGTCGGTAGCTCGGACAGCAGCGGAGACGCCGAGATGGTTGGCGTCA
AGCTTTCCCTGGCAGCGGAAGGGGCTGGATCAACGACCCTCGCAGAATGG
GAAATCGGCGCCATTATTGCGGGAGCAGCTATCCTCCTCTTGCTCCTCTA
TCTATGTAAGGTTGTTTTCTTATTTGTTTTTTGTGGGTTCGATCTCGTTT
TGCTGTCTTGGCCGTTGAGCGCATTAGTTTGTTCAACCACGTTTAACGCG
CGCTCGGTGGTTTCGCGTTGCTAGTTGGGGTGCATCGAGACCGGACGGAG
GGGTCAATCTACCCAAAAACAAGGGTAGAATCAAACGGACAGTTTTTTTC
TTTCAGTCACCTTCGTTGCGTAGTCGCGTTTGAACACAACGGGCCTGATG
GGCGGTTTTGCTGTGCACGCTCGCTTGCACGGACGAAAACGGCTGATCTT
CCCTCTTGGAATGGCCGGCCGAGGTCGTTACCTACTGTGCGTTCACAGAT
CATGTACTGTGGGGGTAGCTGGGGCATCAGTTTTATCCGACAGCTGTCTT
GGTGCCCGCCGCCCCTCAGGTCTGTGTCACTCCCAAAAGAAGCCCCCCGA
AGAAACCCCCCCCCCCGTGGTGGTCCCCGTGGTGGTCCCCGCGGTGGTCC
TGAAGCAAGGTAAGGAAAACCAAGAAGTGTTATTTTTCGGCGTTAGTATT
GATTTCCACGGAGCCATCAATATGAGTGCTGCAGTCTGGGATACTACAAT
GATACGCAGAAGTAGCGCAGCTTCGAAGGAGTTCCATTGGCCCCGGAAGA
GACGATGGCTTTTCTGCATATCAGATAAGTCAACCATAGACAAAAACATG
ATACAGACCAATGAAACAGTTGGTGTTCATGATTTATCTTCCTCTCCGCG
ATGAGGAGGGTATCGACGGCCCGCTGACCCTTGTTGGCGCCCAAACCAGG
TTCGTTCCGACCTATGATCGTTGGGGTCGTAGGGCTCGACCCAGCTCCAT
CGGTTGAGGTCTTGCCGGTACGACGTCCGCCTTCGTACGAATGTGAGTAC
TCTACATGAAATGCGGCGGTAGCGTCGTAGGCACAACGTGTGTTCACGTG
GGGCATGCTTATTGCTGGGAAATGTAGCAAATTTTCCTGAGGTTTAAGGG
GCCATCGCTCTAGGGAGATCCCACGAATGTGGTGCGTGTTTCTTAAGAAC
CGCTCCGCAGAGACGACGCTTTTCCATCCTGTGCGGAAGGAGCGTCTGGG
TATGGTAATTCCTTGAGAACGATTGCACTGAAGGCCGCTACAGCTGCATT
ACGTTTTGCCAAGCGATGTTGATTTTGATCAATGGATTTATCTTGGTTAA
ACCGAAAGCGGGATGTTGAAGCCTTGTTCGACTTGTGGGTGGAAACAGGG
AATGCCGTCAATTTTCTTTAACCGCAATATTTGGCCGGGATTGCTGACCC
CAATCCGGTACATTTACACGCGCGCGGTAAGGCTGGTGAAGCATCATATT
AGTGGGAAATACCTGTTGCAGCACAACATGTAAACTTCGACGGACTGTAC
GGAGACGCTTTAGCAAAGCAACGACTTGAACAGTTTACGGTACATGCCAG
CCGTTTGAGCGGTGTTGAGAACGTGGTTTAATGCGTCTTGTGCATTGTCG
TACAGTATAATTACTAAGCGAGGATTTAGGTGGCAGAGGCCATTAATGTT
GTATACTGATATATCATTCTGCACTAGCATGAGCGAACCAACTTTTGTCC
GTTAAAGCCAATGCGGAGATTTTGGAATGTGGTTTGCTGCGATAGACCGG
TTTAGCCCACGACAGCGGCGCGCCGGCAGCCACAAACTGTGACGCCCTAC
TGACTTCGTATGCATACGGTACAAGCCGTGAAACTAACATGTGCTGGTGC
TGGCTCCCATGGCGGCTCGGAGACTCTCGCCGAGCAGACTGAATGCGAAT
TTTGCAATACATGAGCTTGTAGAATAAGCTCTGTTATGTCAAAAGGAACG
ATGCAGACCCCGTGCCTCATTGTTGTCGTAACCATTGGCGAAGTTAGACC
GACCACGAGCGCTCCCCTTACGCAAACTATTTGAGACCCTGCCTTTTAAA
ACACTATCAAATCAGGATCGAAGCAAGTCAACGTACAATTCATCATGGTC
CCACCCCCCCCGTGGCATAGTGAAAAATGAAGACAAGGGCATTGTACTCT
GCTTCCGTAAAAAATGAACGAACCAACGAACAACAGCAGCCTGCTGTCCA
AGCAGGGGTTGCTCCCCCGGCTGTCCCTCGGACCAACCCTCTTGCGTTGT
GCGCTAGCCTGGGCGCTCACGCCTCAGTGTGGCTCCAACGCAGACTGAAT
AATGTGGCTACACCCTCTCGGGGCAATGCAATTGTAGGATTTTCTGGAAG
GGTACTCGGAACGTTCCCCGGTGAACTTATCTGGGGGTGCAAATTACCGA
TACTCTCTCTCATACAAAATACAGATTTAATCCTGGAATCCTTCACATTT
GGGACGAAGTAGTGTAGAAGGCGAACGAACGCAGGCCTGAGGGGTGGCGT
AGACCATATACGACCAAGGGAAGAGATGAAGGTCAAATTCAGAACTGACG
ATACTGACCGCTGGGAGCGTGAACGGAGATTTATGAAAGAAGATGAGGAA
GACGAGGACAATAACTACAATAGTGTGATTGCGGCTCGGACCGGCGGGAA
GACCGTGCCAATTTCGTGGCGGAATGCTCATTGTGTGACAAGGAGAGGGA
AGTGTACGCAATGGCAGAACTGGGGACAGTTGAAGTTGGTGATACACAAT
GGTCTTGAAACATGGGACAGCCAGACGAAGGTAGTGCGAGGAGCAGCACT
GGATGATAAGAAGAAGTATCGCAAAAACGCGGGAATTGAAGCAGGTATAA
TGGAGAAATCCGTTTTGGGCCATCGTTGGCAAAGTAAGAAGGAACGATTG
GCCATCGTCGATCAATCCTTCGGGAACAATACCCCGTCCTCCCGAGGAAG
CTTGAGCAATGGCCTTACAGCTAAGGCATGAAAATCTTCAGTACGCCCCA
CCCACACACCCCCCGTCGATCCTCATGCGTCGCTGTCGCCAGCCGCGACG
CTCAACATGGGCATCGAACCCGATCCTCACGTGCCTCCGTCGCCAGCCGC
AGTGGTCGACGTGGAGGACAGGCCGCTCCCTCCGCCCTTGCCGCCAAGGC
CACCGCCGGTGAACCAGTCAACACCACACGCGTTTGGTGAGTCCCGAAGT
TCCCTCACCAATGATATGACTAGCACCGTGGACGGCTATTTAGCGACAGT
CCTACTCGCGGTATTTTTTTTATGCATGAACAGAGGGGGTTGCTGGCTGC
CGCATAGTTTGCTGTACCTCTTGCTTGGGGAGACCCTGGAAAGCCCCCGC
TTCTTCCCATTGGTTCACGCAAGTCTTTACAAAACGCTCTGTGGTCTTAA
GGAATCATCCCGTGCCAGCCTTGTATTTTGGTCGCGTATCGGAGTCAGCT
AAGTCCCCCAGCTAGCCGTATTTTCGTCGGAGTTTATTTATTCATGCTCC
CGCGTCTTACGCAACGGAGGACATGCGGAGGCGATAGATATTCTCAAATT
GTCGTTGAAACCTCGAAACCTCTGCCAACCAGGGTATTGCCGCCAACGAG
TACATGTAACCCAGGGGGGCGGTCATATTATACATGGCATCTGCTGGGTT
AACCTGACGTTTTATTGCCGTTTCATGTATTGCGCTGACGTTTCAGTAAC
CGTCAACATCGAGGAAACCTCGCCAGTGCACGAGGAAACAAACACGCCCG
AACCCCCGCCGATCTCCCCGCCGGCCGAGACCGCATTGCAACGGCTAGGT
GAGAGACTTGGACCGGCCCTGTCACACTTTTGTTGGGGCATGTCCTGCGC
TCTCCTGCGACTGCGGTACACGTCTCCTAGTGGGATTTGATTGTTTCAAG
CTCGGAACAATCGATGTATTATATTTAGAATCTTAGACGATTCGGAGCGC
AGTAGGTCAAAGTGTGTGTTTGCTGCGAAAGGGTTTGTTTTTGGGGGGGG
CGGGAGATGAGATGAAGATGAAGATTATCTCCCTTCCTACACATGAGTTT
CGTCTGTGTTTCGCTAAAATTCCCTGCGTTTCGCATAGGCTGGATAGTAT
TTTTATCACTTGCTGCCCACGATCCGCCCCCTCCATGCAGCCTCACCCCT
CCTCGACCCCTGCATAGCCAATCTCACTGGCACTGCACTATCATGGTACT
GGCTTCCTGTCGCGCCAGTGCTCACGTAATCCCCCCGCATGCCTCGCTGT
CGTGGGTTTTTATTTTGTATCCGCAAAGCCAAACGGATAACCAAGGCGCC
CAGCAACACCACTCCCCAGTCGAGCTTCAGGGACATGCCGATCCGAGCGT
TCGGGCCGTTTGCGCCGCAGCGACGCTAACGCGTTTTAGCGGCCGATAAA
CGGTTTTGTTTTCGGTCACGACGGAGGGCAAGAAACGGCGCGCCCATCGC
CGCGTGGAGAGAAAGATGGGCCATGAAAAACGAATCATAACAAAGAGTAG
AGGCCACGGCGGGGCCCGAATCAAGATGGCTAGGTCTAACACATGAAAAG
CGTCTTCTGACGGAGCTTGTTATATTTACCAAACTCAGAGTCTGCACATT
GCCGGGGGGCAAATTAATACAAGTTGGTGCATTTTGGTACGATTTATTTG
TAGTATAAACTGATATGTTGAGGGTTTTCAAACGTATTTGGGCGACAGGT
GTTTCGTTGGGTGGGAACATGCCTCGAATTTTTCAGTTTGCTCCCGGGGA
CCTGTGGATCTTCCGTTTTTTGCTTGTGGTCGCTGTCAACAGCATGATTA
ATATAGCTCTTGTGGGTATCATGTATGGTATATACTTCGAAGTATACATA
GATATAATAGTTGTAGTAGGGAGGACTTGGGGATTTACATGTCTACATCG
ATCGAAGTGTCGATACTGTGGTGCTGGCATATCATCTTATATTGACCTCC
CCTAAACTCTTTTTGGGAGCTGGTGTCTTCAAGGGTCACTGAACGCCCAC
TTCGTCATAGAGTCTAGGTGATGGTTGTATTTCAGTGCTATCATACTGCA
ACCCGTACATATATATGGAGTGTTAGCTTCTTTGCATACTACTCCGTATA
AATGTATACATAGGCCTACAAGTACTTGATGGTGTTGATGAGTCTCTGAT
GTTATCTTAAGATCCATCAAACTAACGTGTTTCAACTCTGAAATACAAAG
TAGAATATAATATACTGTATACATATCATACTTGTTGTCGTCGAGCTCGG
TTTTCCGTTTTTTCGGTATGCCACTCCTGGTTATATGTCGGACGTTTTTT
GCGGATACTGAGTACAATCATACACACACTGTTGGAATACTCAATGTCAG
TCATTAGTATTGCACTGCTGTAAACACAGCACGTAGGTATTCACCGTAAG
GA

Coding sequence (CDS) from alignment at S-dermatodea_contig8023:2..9503-

>mRNA_S-dermatodea_contig8023.16207.1 ID=mRNA_S-dermatodea_contig8023.16207.1|Name=mRNA_S-dermatodea_contig8023.16207.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3750bp|location=Sequence derived from alignment at S-dermatodea_contig8023:2..9503- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGACGCCCGAATTCAACGAGGAATGGCGCTACGAGGGCTTTTCAAC
GGACGGCGAGGTTGGTATTGAGGGCGCAATCGATTCGGACGGCAACCTTA
TCATCGCCGGGGTGCAGGGCTACCAGAGTTACGCCAACGAGGACGACACC
TTCACAAACGAGTACGCTGGTGACTTCGCAGCGGTAAAGTTGCTGGGAAC
CTCGGGGGTTGAGGCCTGGGCATTCACGTCCGGCTCTCTCGACGGCGAGG
CAGATTTTTTCACTGGCGTGGACACCGACAGCAACAACGACGTGATTCTT
GTGGGGTGGACGGAGGGCTACTGGACAACATCCAACACCGCGAACACAAG
AAATTTAGCGGTTGTGAAAGTCGATGGGAGCACAGGGGACGAGATTTGGA
GGTACCAGGCCGTTTCCCAGATGGCGACGCCCGAATTCAACGAGGAATGG
CGCTACGAGGGCTTTTCAACGGACGGCGAGGTTGGTATTGAGGGCGCAAT
CGATTCGGACGGCAACCTTATCATCGCCGGGGTGCAGGGCTACCAGAGTT
ACGCCAACGAGGACGACACCTTCACAAACGAGTACGCTGGTGACTTCGCA
GCGGTAAAGTTGCTGGGAACCTCGGGGGTTGAGGCCTGGGCATTCACGTC
CGGCTCTCTCGACGGCGAGGCAGATTTTTTCACTGGCGTGGACACCGACA
GCAACAACGACGTGATTCTTGTGGGGTGGACGGAGGGCTACTGGACAACA
TCCAACACCGCGAACACAAGAAATTTAGCGGTTGTGAAAGTCGATGGGAG
CACAGGGGACGAGATTTGGAGGTACCAGGCCGTTTCCCAGGTCTCGACTA
CGTCAACGACTTTTCAGACCCTGATTTACAGCGGGTTAACGGCCGGTCAT
AGCGTGGCGATCGATGGCAATGATAATGTGTTTCTCGTCGGGGGCACCTA
CAACAGCTTGGTGTTCGGAGCGGGCGATCCTGGCGACTACGACTACTTCA
TCATGAAGCTAAACGGAGCGACGGGGGAGGAGATCTTTACCGTGCAGGGT
GGGCTCAGCTATCACTGGGACGTTTTTAAGGGCGTCTCGGTGGACTCGGC
GGGAGACGTCGTTGCCGCGGGTACCTCGGGGTACAGAACCTCGCTAGACT
TCCTCGTGGTAAAATTTAGCGGCGCCACCGGGGACATGATATGGGAGTAC
TCGCCTTATTCTTCAACCATTGACGTCTTACACGCGGTCACCTTCGACAG
CGATGATAACGTGTATGTGGCCGGCGCCCACGACTCCCTGAACCTGCAGG
GCAACATAGCCGAGAGCCCGGGTGTGACGAAGCTGAGCGGCGCTACCGGC
GCCGAGGTGTGGGAATATGAGGGGATAGCGGCATCCGGGGCGGTGTTCTG
GAGTGTCGCCGTAGACCCTTTGAACGGCTGGGTGGTGGGCGCCGGGCGGA
CGGAAGGAACGTGGCTGACGGGCGCGGCTCAGGGAGGCTTCGATTTTGCC
GCGGTGGTGTTGGACGGGGATACAGGAGACGAGGTCGTCCGGTATCAGAC
TGGAGGCGCTGGTAGTGATTATCTGACCTTCGCGGGCTTCGACGCCGCGG
GTGCGCTCTTCCTCGTCGGTAGCTCGGACAGCAGCGGAGACGCCGAGATG
GTTGGCGTCAAGCTTTCCCTGGCAGCGGAAGGGGCTGGATCAACGACCCT
CGCAGAATGGGAAATCGGCGCCATTATTGCGGGAGCAGCTATCCTCCTCT
TGCTCCTCTATCTATGTCTCGACTACGTCAACGACTTTTCAGACCCTGAT
TTACAGCGGGTTAACGGCCGGTCATAGCGTGGCGATCGATGGCAATGATA
ATGTGTTTCTCGTCGGGGGCACCTACAACAGCTTGGTGTTCGGAGCGGGC
GATCCTGGCGACTACGACTACTTCATCATGAAGCTAAACGGAGCGACGGG
GGAGGAGATCTTTACCGTGCAGGGTGGGCTCAGCTATCACTGGGACGTTT
TTAAGGGCGTCTCGGTGGACTCGGCGGGAGACGTCGTTGCCGCGGGTACC
TCGGGGTACAGAACCTCGCTAGACTTCCTCGTGGTAAAATTTAGCGGCGC
CACCGGGGACATGATATGGGAGTACTCGCCTTATTCTTCAACCATTGACG
TCTTACACGCGGTCACCTTCGACAGCGATGATAACGTGTATGTGGCCGGC
GCCCACGACTCCCTGAACCTGCAGGGCAACATAGCCGAGAGCCCGGGTGT
GACGAAGCTGAGCGGCGCTACCGGCGCCGAGGTGTGGGAATATGAGGGGA
TAGCGGCATCCGGGGCGGTGTTCTGGAGTGTCGCCGTAGACCCTTTGAAC
GGCTGGGTGGTGGGCGCCGGGCGGACGGAAGGAACGTGGCTGACGGGCGC
GGCTCAGGGAGGCTTCGATTTTGCCGCGGTGGTGTTGGACGGGGATACAG
GAGACGAGGTCGTCCGGTATCAGACTGGAGGCGCTGGTAGTGATTATCTG
ACCTTCGCGGGCTTCGACGCCGCGGGTGCGCTCTTCCTCGTCGGTAGCTC
GGACAGCAGCGGAGACGCCGAGATGGTTGGCGTCAAGCTTTCCCTGGCAG
CGGAAGGGGCTGGATCAACGACCCTCGCAGAATGGGAAATCGGCGCCATT
ATTGCGGGAGCAGCTATCCTCCTCTTGCTCCTCTATCTATGTCTGTGTCA
CTCCCAAAAGAAGCCCCCCGAAGAAACCCCCCCCCCCGTGGTGGTCCCCG
TGGTGGTCCCCGCGGTGGTCCTGAAGCAAGGTCTGTGTCACTCCCAAAAG
AAGCCCCCCGAAGAAACCCCCCCCCCCGTGGTGGTCCCCGTGGTGGTCCC
CGCGGTGGTCCTGAAGCAAGGTTCGTTCCGACCTATGATCGTTGGGGTCG
TAGGGCTCGACCCAGCTCCATCGGTTGAGGTCTTGCCGGTACGACGTCCG
CCTTCGTACGAATGTTCGTTCCGACCTATGATCGTTGGGGTCGTAGGGCT
CGACCCAGCTCCATCGGTTGAGGTCTTGCCGGTACGACGTCCGCCTTCGT
ACGAATCCGCGACGCTCAACATGGGCATCGAACCCGATCCTCACGTGCCT
CCGTCGCCAGCCGCAGTGGTCGACGTGGAGGACAGGCCGCTCCCTCCGCC
CTTGCCGCCAAGGCCACCGCCGGTGAACCAGTCAACACCACACGCGTTTG
CCGCGACGCTCAACATGGGCATCGAACCCGATCCTCACGTGCCTCCGTCG
CCAGCCGCAGTGGTCGACGTGGAGGACAGGCCGCTCCCTCCGCCCTTGCC
GCCAAGGCCACCGCCGGTGAACCAGTCAACACCACACGCGTTTGTAACCG
TCAACATCGAGGAAACCTCGCCAGTGCACGAGGAAACAAACACGCCCGAA
CCCCCGCCGATCTCCCCGCCGGCCGAGACCGCATTGCAACGGCTAGTAAC
CGTCAACATCGAGGAAACCTCGCCAGTGCACGAGGAAACAAACACGCCCG
AACCCCCGCCGATCTCCCCGCCGGCCGAGACCGCATTGCAACGGCTAGCC
AAACGGATAACCAAGGCGCCCAGCAACACCACTCCCCAGTCGAGCTTCAG
GGACATGCCGATCCGAGCGTTCGGGCCGTTTGCGCCGCAGCGACGCTAAC
CAAACGGATAACCAAGGCGCCCAGCAACACCACTCCCCAGTCGAGCTTCA
GGGACATGCCGATCCGAGCGTTCGGGCCGTTTGCGCCGCAGCGACGCTAA