prot_S-dermatodea_contig8015.16202.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8015.16202.1
Unique Nameprot_S-dermatodea_contig8015.16202.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length475
Homology
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BLAST of mRNA_S-dermatodea_contig8015.16202.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.970e-11
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:   76 LRKSCDNCVKLKRACNGESPCRLCARMRKVCCFSAKKRSGPRKGTKYNTRR 126
            LRKSCD CV+LKRAC+G+SPC+LC R R+ C  S K++SGP KGTKY TRR
Sbjct:   34 LRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRR 84
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BLAST of mRNA_S-dermatodea_contig8015.16202.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.240e-10
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:   76 LRKSCDNCVKLKRACNGESPCRLCARMRKVCCFSAKKRSGPRKGTKYNTRRA 127
            LRKSCD CV+LKRAC+G++PC LC R R+ C  S K++SGP KGTKY TRR+
Sbjct:   62 LRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRS 113
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BLAST of mRNA_S-dermatodea_contig8015.16202.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 1.620e-10
Identity = 49/114 (42.98%), Postives = 61/114 (53.51%), Query Frame = 0 
Query:   76 LRKSCDNCVKLKRACNGESPCRLCARMRKVCCFSAKKRSGPRKGTKYNTRRAHN---------SNKGTTPQTQQY---GEAVRGGHLQQYTL-----DAEWHRATKRRAEDGGG 172
            LRKSCD CV+LKRAC+G++PC LCAR  K C  SA+K+SGP KGTKY  RR  +            G  P   ++   G +  GG L  +       DA   RA +R    GGG
Sbjct:   10 LRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTGGAGGPPLPHEFQGGGTSGGGGQLPHHDFSLAPFDAAGMRAAERTYNSGGG 123
[Close]
BLAST of mRNA_S-dermatodea_contig8015.16202.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.860e-10
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0 
Query:   76 LRKSCDNCVKLKRACNGESPCRLCARMRKVCCFSAKKRSGPRKGTKYNTRR 126
            LRKSCD CV+LKRAC+G++PC LCAR  K C  SA+K+SGP KGTKY  RR
Sbjct:   18 LRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRR 68
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8015.16202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L7F3_9PHAE2.970e-1168.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPZ9_ECTSI1.240e-1065.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L009_9PHAE1.620e-1042.98Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI2.860e-1068.63Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 74..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8015contigS-dermatodea_contig8015:2619..6026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8015.16202.1mRNA_S-dermatodea_contig8015.16202.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8015 2525..6325 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8015.16202.1 ID=prot_S-dermatodea_contig8015.16202.1|Name=mRNA_S-dermatodea_contig8015.16202.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=475bp
MMLSEVAKRMAERKARQEGVDALGMRGVPLPEQLLLLQGKTTTTDKNSNN
SNTSCGRHTAVSFCPPPSPSIDASNLRKSCDNCVKLKRACNGESPCRLCA
RMRKVCCFSAKKRSGPRKGTKYNTRRAHNSNKGTTPQTQQYGEAVRGGHL
QQYTLDAEWHRATKRRAEDGGGETSFVRRANNKIQRLPTVDPASKVTSFA
EQPAEAGDVTRPLPAIEEGALLLLRKLKTFRPSSETMGSTPLEPARHYPQ
EEPKQQTQRLPSLFDMGAVSSPPAHLSDALHRRAFSYGTQSLAQSVTGTA
TPRRRLQEITHPRVGKGCAFPSLATRVILSEPAAPVMVPSFPRYVRAPIE
DVPCAQPYHATPLYGGEAIVWEPRAVTPSQPVCDPYAQDWVPVPQSFASR
GKSGMCSTWRAGGSAPSAIGRTRSGGYAEYVPYHRVETKGFPVAPAGVGR
GGSGMGVRFDRCSTSARYLYAKTY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf