mRNA_S-dermatodea_contig8011.16197.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: D7FZ49_ECTSI (NAD-dependent epimerase/dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ49_ECTSI) HSP 1 Score: 248 bits (634), Expect = 7.650e-80 Identity = 118/131 (90.08%), Postives = 126/131 (96.18%), Query Frame = 1
Query: 1 GTRSLLETCRDIGGRPRFVFASSIAAFGGGAEVSDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRLHDA 393
GTRSLL+TCR IGGRPRFVFASSIAAFGGG +V+DETKLLPQ+TYGMTKACAELL+NDCTRKGFVDGRIARLPTV+VRPGPPNPAATGCFSSVPKAVLHGQHF+SPVSPDL HAC+GL SAV GLIRLHDA
Sbjct: 155 GTRSLLDTCRQIGGRPRFVFASSIAAFGGGEQVTDETKLLPQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSPDLRHACVGLCSAVDGLIRLHDA 285
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: A0A812N7H2_9DINO (DenD protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812N7H2_9DINO) HSP 1 Score: 137 bits (345), Expect = 9.400e-37 Identity = 76/140 (54.29%), Postives = 91/140 (65.00%), Query Frame = 1
Query: 1 GTRSLLETCR--DIGG--RPRFVFASSIAAFGG-----GAEVSDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRLHDA 393
GTR LL+ CR GG RP+FVF SS+A FG G V D K++P+ TYGMTKA ELL+ND TRKGF+DGR ARLPTVIVRPG PN A T CFS V + LHG+ V PV+ L H+ + + L+ LHDA
Sbjct: 112 GTRHLLDACRARTEGGAARPKFVFTSSLAVFGETYGEQGRAVGDTDKIVPKNTYGMTKAVCELLVNDYTRKGFLDGRTARLPTVIVRPGRPNAATTSCFSGVVREPLHGEDAVLPVARTLPHSVTSTRALISNLVILHDA 251
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: A0A800A3D9_9PROT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A800A3D9_9PROT) HSP 1 Score: 134 bits (337), Expect = 1.220e-36 Identity = 75/134 (55.97%), Postives = 90/134 (67.16%), Query Frame = 1
Query: 1 GTRSLLETCRDIGGRPRFVFASSIAAFGGGA---EVSDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRLHDA 393
G+ ++LE CR P+ VFASS+A FGG A V+D T++ PQTTYGMTKA EL+IND TRKGF+DGR ARLPTVI+RPGPPN AA+G S V + L G FV PV +G +AV GLI L DA
Sbjct: 21 GSFNVLEACRARDSVPKVVFASSLAVFGGEALPDTVNDMTRVTPQTTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGPPNAAASGFASGVFREPLAGNEFVLPVGMGTKMMVLGTRNAVAGLIGLMDA 154
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: A0A6J4K8H2_9BACT (Epimerase domain-containing protein n=1 Tax=uncultured Armatimonadetes bacterium TaxID=157466 RepID=A0A6J4K8H2_9BACT) HSP 1 Score: 136 bits (342), Expect = 2.050e-36 Identity = 75/134 (55.97%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 1 GTRSLLETCRDIGGRPRFVFASSIAAFGGGAEV----SDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRLHD 390
G R+L E R++GGR R VFASSIA FGG A + +D+TKL PQTTYGMTKA EL+IND TRKGF DGR ARLPTVI+RPG PN AA+G S + + L+G PV D H G + V LI +HD
Sbjct: 115 GGRNLFEAARELGGRTRLVFASSIACFGGDAAMPEPCTDQTKLTPQTTYGMTKAVCELMINDYTRKGFFDGRSARLPTVIIRPGKPNTAASGWASGMFREPLNGATCSLPVRRDQRHPMTGHRTVVDSLIAVHD 248
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: A0A437QH10_9PROT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QH10_9PROT) HSP 1 Score: 135 bits (339), Expect = 4.340e-36 Identity = 73/134 (54.48%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 1 GTRSLLETCRDIGGRPRFVFASSIAAFGGGAE---VSDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRLHDA 393
G R +LE CR +G PR +F SSIA FGG A V D K PQTTYGMTKA EL+IND TRKGF+DGR ARLPTVI+RPG PN AA+ FS + + L G PV PD+ H IG + V G++ L++A
Sbjct: 107 GGRYVLEACRALGSAPRVLFTSSIATFGGAAMPDVVGDLVKQTPQTTYGMTKAVLELMINDYTRKGFLDGRSARLPTVIIRPGKPNAAASSFFSGMFREPLAGVECKIPVPPDVRHPVIGYRTVVDGILALYEA 240
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: A0A4D9D647_9STRA (Epimerase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D647_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.660e-36 Identity = 75/135 (55.56%), Postives = 90/135 (66.67%), Query Frame = 1
Query: 1 GTRSLLETCRD------IGGRP-RFVFASSIAAFGGGAEVSDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRL 384
GT++LLE R +G +P RFVF SS AAFG EVSDETKL PQ+TYGMTKA EL++ND TRKG+VDGR RLPTVIVRPG N A+TGCFS+V + +L G +V P P H I + GL+ L
Sbjct: 128 GTQNLLEKARALHASGRVGEKPVRFVFPSSFAAFGPHPEVSDETKLTPQSTYGMTKAVGELMVNDYTRKGWVDGRTGRLPTVIVRPGNKNGASTGCFSAVVRELLMGHDYVIPYDPRQTHPVISTRRTIKGLLAL 262
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: A0A2S6TU17_9PROT (Putative epimerase/dehydratase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha3_Bin3 TaxID=2013069 RepID=A0A2S6TU17_9PROT) HSP 1 Score: 134 bits (337), Expect = 9.760e-36 Identity = 75/134 (55.97%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 1 GTRSLLETCRDIGGRPRFVFASSIAAFGGGA---EVSDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRLHDA 393
G ++LE CR P+ VFASS+A FGG A V+D T++ PQTTYGMTKA EL+IND TRKGF+DGR ARLPTVI+RPGPPN AA+G S V + L G FV PV +G +AV GLI L DA
Sbjct: 110 GGHNVLEACRARDSVPKVVFASSLAVFGGEALPDTVNDMTRVTPQTTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGPPNAAASGFASGVFREPLAGNEFVLPVGMGTKMMVLGTRNAVAGLIGLMDA 243
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: A0A800A6L8_9PROT (NAD-dependent epimerase/dehydratase family protein (Fragment) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A800A6L8_9PROT) HSP 1 Score: 130 bits (327), Expect = 3.260e-35 Identity = 74/134 (55.22%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 1 GTRSLLETCRDIGGRPRFVFASSIAAFGGG---AEVSDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRLHDA 393
G R +LE R G PR V ASS+A FGG V++ T+++PQTTYGMTKA EL+IND TRKGF+DGR ARLPTVI+RPG PN AA+G S V + L GQ +V PV D IG SA+ GL L DA
Sbjct: 97 GGRHILEALRARKGTPRIVLASSLAVFGGPDMPEAVTEMTRVVPQTTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGAPNAAASGFASGVFREPLSGQDYVLPVVMDTRMMVIGARSAIAGLTGLMDA 230
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: A0A2S6UCI5_9PROT (Putative epimerase/dehydratase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6UCI5_9PROT) HSP 1 Score: 131 bits (330), Expect = 7.630e-35 Identity = 74/134 (55.22%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 1 GTRSLLETCRDIGGRPRFVFASSIAAFGGG---AEVSDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRLHDA 393
G R +LE R G PR V ASS+A FGG V++ T+++PQTTYGMTKA EL+IND TRKGF+DGR ARLPTVI+RPG PN AA+G S V + L GQ +V PV+ D IG SA+ GL L DA
Sbjct: 97 GGRHILEALRARKGTPRIVLASSLAVFGGPDMPEAVTEMTRVVPQTTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGAPNAAASGFASGVFREPLSGQDYVLPVAMDTRMMVIGARSAIAGLTGLMDA 230
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Match: A0A7J9ZDJ8_9ACTN (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Streptosporangiales bacterium TaxID=2604148 RepID=A0A7J9ZDJ8_9ACTN) HSP 1 Score: 131 bits (330), Expect = 9.030e-35 Identity = 72/133 (54.14%), Postives = 86/133 (64.66%), Query Frame = 1
Query: 1 GTRSLLETCRDIGGRPRFVFASSIAAFGGGA---EVSDETKLLPQTTYGMTKACAELLINDCTRKGFVDGRIARLPTVIVRPGPPNPAATGCFSSVPKAVLHGQHFVSPVSPDLGHACIGLSSAVHGLIRLHD 390
G ++LE R PR VF SSIAAFGG A VSD TKL P+TTYG TKA ELL+ND TRKGFVDGR ARLPTV++RPG PN AA+ S + + L G+ + PV PD+ G + V LIRLH+
Sbjct: 107 GVHAVLEAARARSSTPRVVFTSSIAAFGGEAIAGTVSDSTKLTPETTYGTTKAIGELLVNDYTRKGFVDGRSARLPTVVIRPGRPNAAASSWCSGIFREPLGGEEAIVPVDPDIRVPISGYRTLVDNLIRLHE 239 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8011.16197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8011.16197.1 >prot_S-dermatodea_contig8011.16197.1 ID=prot_S-dermatodea_contig8011.16197.1|Name=mRNA_S-dermatodea_contig8011.16197.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=131bp GTRSLLETCRDIGGRPRFVFASSIAAFGGGAEVSDETKLLPQTTYGMTKAback to top mRNA from alignment at S-dermatodea_contig8011:404..2425- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8011.16197.1 ID=mRNA_S-dermatodea_contig8011.16197.1|Name=mRNA_S-dermatodea_contig8011.16197.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2022bp|location=Sequence derived from alignment at S-dermatodea_contig8011:404..2425- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8011:404..2425- >mRNA_S-dermatodea_contig8011.16197.1 ID=mRNA_S-dermatodea_contig8011.16197.1|Name=mRNA_S-dermatodea_contig8011.16197.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at S-dermatodea_contig8011:404..2425- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |