mRNA_S-dermatodea_contig801.16196.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: D7FK43_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK43_ECTSI) HSP 1 Score: 334 bits (856), Expect = 6.410e-109 Identity = 166/233 (71.24%), Postives = 190/233 (81.55%), Query Frame = 1
Query: 94 GRRPSYARQSRVGQQSNGRGNGRITATQALTALNVIVFMLQTRFPAITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLSCIVNPRMPAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMSSSQIDNMGHLGGFIGGAAVTFLIGPRFKRQYNPLTGEQYIVDVSTKLSLPRFGRKP 792
GRRP RQ+ G G ITAT L ALN IV++ Q R+PAIT+AGWK+APAITQQGQ+YRLLTP+VLHG+ HL +NSMSF+SVGPVVE+V+G KF+TVY LAGIAGNVLSCIVNPR P+VGASGAIFGMVGAW AFCLMNE +GR NSQRAL++V QTVM+NV+YGM SSQIDNMGHLGGF+GGAA+TFLIGPRFKR+ NP TG+ YIVD S KL PR G P
Sbjct: 39 GRRPVQRRQA-----GGSGGQGGITATNVLLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTLAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINVVYGMGSSQIDNMGHLGGFLGGAAMTFLIGPRFKRRLNPYTGQPYIVDESFKLGWPRLGESP 266
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: A0A6H5JA75_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA75_9PHAE) HSP 1 Score: 323 bits (829), Expect = 1.370e-102 Identity = 161/232 (69.40%), Postives = 188/232 (81.03%), Query Frame = 1
Query: 97 RRPSYARQSRVGQQSNGRGNGRITATQALTALNVIVFMLQTRFPAITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLSCIVNPRMPAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMSSSQIDNMGHLGGFIGGAAVTFLIGPRFKRQYNPLTGEQYIVDVSTKLSLPRFGRKP 792
RR + R+ Q G G ITAT AL ALN IV++ Q R+PAIT+AGWK+APAITQQGQ+YRLLTP+VLHG+ HL +NSMSF+SVGPVVE+V+G KF+TVY +AGIAGNVLSCIVNPR P+VGASGAIFGMVGAW AFCLMNE +GR NSQRAL++V QTVM+NV+YGM SSQIDNMGHLGGF+GGAA+TFLIGPR + NP TG+ YIVD S KL PR G+ P
Sbjct: 197 RRSVFGRRPVQRQAGGSGGQGGITATNALLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTVAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINVVYGMGSSQIDNMGHLGGFLGGAAITFLIGPR---RLNPYTGQPYIVDESFKLGWPRLGKSP 425
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: A0A835Z1Q0_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q0_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.190e-43 Identity = 87/196 (44.39%), Postives = 125/196 (63.78%), Query Frame = 1
Query: 166 TATQALTALNVIVFMLQTRFPAITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLSCIVNPRMPAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMSSSQIDNMGHLGGFIGGAAVTFLIGPRFKRQYNPLTGEQYIVDV 753
+ T L A+ ++ Q P IT G K+ I +GQ+YRL+TP+ LH NL HLL+NSMS ++GP VE+ G ++ +++Y L+G++G + SC NPR +VGASGAIFGMVGA F N +G + R LQS+ +TV++N I G+ SQIDN GH GGF+ G +T+L GP + +P +G + +VDV
Sbjct: 19 SVTNVLLAITAAIYGAQWLVPGITMQGAKITSKI-MRGQWYRLVTPIFLHANLAHLLMNSMSLYNIGPFVEQWFGKRRMLSIYVLSGVSGVLASCYWNPRASSVGASGAIFGMVGAAACFFASNRNELGA-GADRGLQSILRTVVINTIMGLQISQIDNAGHAGGFVAGFVLTYLFGPNMRWVGSPYSGPR-LVDV 211
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: A0A7S2ENP6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ENP6_9STRA) HSP 1 Score: 166 bits (421), Expect = 2.030e-42 Identity = 91/213 (42.72%), Postives = 134/213 (62.91%), Query Frame = 1
Query: 160 RITATQALTALNVIVFMLQTRFPAITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLSCIVNPRMPAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMSSSQIDNMGHLGGFIGGAAVTFLIGPRFKRQYNPLTGEQYIVD---VSTKLSLPRFGRK 789
R + TQ L NV ++ LQ FP+ITR G K + I + + YRL++PV LHG ++HL +NS S N++GP VE+ G +F+ Y AG+AGN+LS ++P P+VGASGAIFG+VGA+ F N++ G+ + +R L S+ QT + N+IYG S QIDN GH+GG +GGA + + GP+ P G++ ++D + S+ F RK
Sbjct: 195 RSSLTQRLVWTNVAIYGLQVVFPSITRWGAKRSDLILSRRELYRLISPVFLHGGVVHLAMNSFSLNNIGPEVERCFGQGRFLGTYLAAGVAGNLLSAYMSPN-PSVGASGAIFGLVGAYAVFLGRNKSLFGK-SGERGLASLRQTFVTNLIYGFMSPQIDNWGHIGGALGGATIAYHFGPKLYLAALP-NGQRIVLDKPNIRVPRSIETFPRK 404
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: E1Z519_CHLVA (Rhomboid domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z519_CHLVA) HSP 1 Score: 155 bits (391), Expect = 3.590e-40 Identity = 90/210 (42.86%), Postives = 129/210 (61.43%), Query Frame = 1
Query: 169 ATQALTALNVIVFMLQTRFP-AITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLSCIVNPRMPAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMSSSQIDNMGHLGGFIGGAAVTFLIGPRFKRQYNPLTGEQYIVDVSTKLSLPRFGRKPR 795
AT L N ++F LQ A+T G K+ A+ GQ++RLLTP LHGNLMHL +N S N++GP VE G +F+ +Y A +AGNV S + P+ ++GASGA+FG+ GA + N G+ S R L+ + QT++LNV+YG+SS++IDN GH+GG +GGA L+GPRF+ P +++VDV+ LP +PR
Sbjct: 38 ATDVLLVSNALLFGLQLLTKQALTVWGVKVN-ALVVAGQWWRLLTPAFLHGNLMHLAVNCYSLNNLGPPVEGAAGPPRFLLMYLSAAVAGNVASFLGAPKSVSLGASGAVFGIGGALAMYFYRNRDIYGK-TSDRVLRQLWQTLVLNVVYGLSSTRIDNWGHMGGLVGGALAGLLLGPRFQATTLPGKRGKWLVDVAP---LPWLRSQPR 242
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: L1I841_GUITC (Rhomboid domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I841_GUITC) HSP 1 Score: 157 bits (397), Expect = 7.390e-40 Identity = 95/204 (46.57%), Postives = 129/204 (63.24%), Query Frame = 1
Query: 172 TQALTALNVIVFMLQTRFP-AITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLSCIVNPRM-PAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMS-SSQIDNMGHLGGFIGGAAVTFLIGPRFKRQYNPLTGEQYIVDVSTKLSLP 774
T +NV+VF+LQ A+ AG K+ I + QYYRLLTP+ LHG+L H+L+N S N++GP VE+ G ++ + Y LAGIAGNV S P++ P+VGASGAIFG+VGA F ++ G S+ L + QT +LN+I G++ S IDN GH+GG IGGA V +LIGP K + + LTG Q +VD +SLP
Sbjct: 145 TDFFLIVNVVVFLLQLLTQGALLEAGAKITSMIVYERQYYRLLTPIFLHGSLSHILVNCFSLNAIGPQVERYFGTERTVITYLLAGIAGNVASFYFGPKLIPSVGASGAIFGLVGALGVFLARHQDIFG-DRSRYMLNGIIQTCILNLIIGLAPGSNIDNWGHIGGAIGGAVVAYLIGPNLKVKRS-LTG-QVLVDEPL-VSLP 344
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: A0A2R6XWP7_MARPO (Rhomboid domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XWP7_MARPO) HSP 1 Score: 155 bits (391), Expect = 7.530e-39 Identity = 87/195 (44.62%), Postives = 126/195 (64.62%), Query Frame = 1
Query: 172 TQALTALNVIVFMLQTRFPA-ITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLS-CIVNPRMPAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMSSSQIDNMGHLGGFIGGAAVTFLIGPRFKRQYNPLTGEQYIVD 750
T L LN++VF+ Q + AG K+ I +GQ++RLLTP VLH N+ HLL+NS S NSVGP VE + G K+F+ VY ++ + LS C+ + P+VGASGAIFG+VGA F L ++ M QR+ + VG+ ++LN++ G+SS+ IDN H GG +GGAAVT+L+GP + + P G++ +VD
Sbjct: 164 TNFLLGLNILVFIAQAATQGKLLLAGAKVNSLI-DKGQFWRLLTPAVLHANVFHLLVNSYSLNSVGPSVEAIAGPKRFVAVYTISALTSTTLSYCLC--KSPSVGASGAIFGLVGALAVFLLRHKNMM--VGGQRSFKQVGRIIVLNMVLGLSSAGIDNWSHFGGLLGGAAVTWLLGPVYSFETPPGGGKRQLVD 353
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: A0A7S3PU80_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PU80_9STRA) HSP 1 Score: 153 bits (386), Expect = 4.660e-38 Identity = 86/208 (41.35%), Postives = 119/208 (57.21%), Query Frame = 1
Query: 157 GRITATQALTALNVIVFMLQTRFPAITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLSCIVNPRMPAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMSSSQIDNMGHLGGFIGGAAVTFLIGPRFKRQYNPLTGEQYIVDVSTKLSLPRF 780
G+ + T L NVI++ LQ P ITR G K + I Q Q YRL TPV LHG+++HL++NS S ++GP VE+ G +F+ Y AGIAGN+ S P P++GASGA+FG++GA+ AF N F GR Q + V T+M+NVI+G+ S IDN H+GG + G + GP K L G I+ + LP +
Sbjct: 111 GKYSWTSRLIVTNVIMYGLQMMMPGITRMGAKRSDMIMQGQQLYRLFTPVFLHGSILHLMMNSFSLQNIGPEVERNFGSGRFLATYVAAGIAGNMASAYYTPN-PSLGASGAVFGIMGAYYAFLSNNSQFFGRSGEQM-MGRVSSTLMMNVIFGLVSPSIDNWAHIGGAVAGVGMAMTFGP--KLYLIGLPGGGRIIADKPSVRLPPY 314
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: A0A176VZQ0_MARPO (Rhomboid domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VZQ0_MARPO) HSP 1 Score: 155 bits (391), Expect = 3.640e-37 Identity = 87/195 (44.62%), Postives = 126/195 (64.62%), Query Frame = 1
Query: 172 TQALTALNVIVFMLQTRFPA-ITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLS-CIVNPRMPAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMSSSQIDNMGHLGGFIGGAAVTFLIGPRFKRQYNPLTGEQYIVD 750
T L LN++VF+ Q + AG K+ I +GQ++RLLTP VLH N+ HLL+NS S NSVGP VE + G K+F+ VY ++ + LS C+ + P+VGASGAIFG+VGA F L ++ M QR+ + VG+ ++LN++ G+SS+ IDN H GG +GGAAVT+L+GP + + P G++ +VD
Sbjct: 409 TNFLLGLNILVFIAQAATQGKLLLAGAKVNSLI-DKGQFWRLLTPAVLHANVFHLLVNSYSLNSVGPSVEAIAGPKRFVAVYTISALTSTTLSYCLC--KSPSVGASGAIFGLVGALAVFLLRHKNMM--VGGQRSFKQVGRIIVLNMVLGLSSAGIDNWSHFGGLLGGAAVTWLLGPVYSFETPPGGGKRQLVD 598
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Match: A0A7S1H9N4_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H9N4_HEMAN) HSP 1 Score: 143 bits (361), Expect = 1.230e-36 Identity = 84/169 (49.70%), Postives = 112/169 (66.27%), Query Frame = 1
Query: 172 TQALTALNVIVFMLQTRFP-AITRAGWKLAPAITQQGQYYRLLTPVVLHGNLMHLLINSMSFNSVGPVVEKVLGVKKFITVYALAGIAGNVLSCIVNPRMPAVGASGAIFGMVGAWTAFCLMNEAFMGRQNSQRALQSVGQTVMLNVIYGMS-SSQIDNMGHLGGFIGG 672
T+AL A+NV VF QT A+T AG ++ I GQYYRL TP+ LHG+ HLL+N S N+VGP VE + G+ + VY +G+AGNVLSC+++ M +VGASGAIFG+VGA F ++ +G S+ AL S+GQT+ LN+ G+ S IDN GHLGG +GG
Sbjct: 17 TKALLAVNVAVFFAQTLSQGALTLAGAMVSSDIAA-GQYYRLFTPMFLHGSFNHLLVNCFSLNAVGPQVEALYGLDRMSVVYLASGVAGNVLSCMMSSHM-SVGASGAIFGLVGALGVFLARHQEMLGG-GSKVALSSIGQTIFLNMALGLRPGSNIDNWGHLGGLVGG 182 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig801.16196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig801.16196.1 >prot_S-dermatodea_contig801.16196.1 ID=prot_S-dermatodea_contig801.16196.1|Name=mRNA_S-dermatodea_contig801.16196.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=262bp MMAHRRSRYTSPYGGGRGGRGGRRPSYARQSRVGQQSNGRGNGRITATQAback to top mRNA from alignment at S-dermatodea_contig801:13877..22951- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig801.16196.1 ID=mRNA_S-dermatodea_contig801.16196.1|Name=mRNA_S-dermatodea_contig801.16196.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=9075bp|location=Sequence derived from alignment at S-dermatodea_contig801:13877..22951- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig801:13877..22951- >mRNA_S-dermatodea_contig801.16196.1 ID=mRNA_S-dermatodea_contig801.16196.1|Name=mRNA_S-dermatodea_contig801.16196.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1572bp|location=Sequence derived from alignment at S-dermatodea_contig801:13877..22951- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |