mRNA_S-dermatodea_contig12625.1619.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: A0A835Z9D7_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D7_9STRA) HSP 1 Score: 100 bits (250), Expect = 7.590e-20 Identity = 59/110 (53.64%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 4 WDFVDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPG-GAE 330
+DFVDVDPFGS MPF AA+A V DGGV+A AATD+ VLCG+ ++AC Y + E A+RVLL + AR++GRRV PL+CVAL FYVR+F+ + GAE
Sbjct: 226 FDFVDVDPFGSPMPFAAAALAAVTDGGVVALAATDMQVLCGRP-ARACAATYACWPPPMA-SSEVALRVLLRAVAAAARQQGRRVQPLVCVALQFYVRVFLRVTTADGAE 333
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: F0YPE0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPE0_AURAN) HSP 1 Score: 97.8 bits (242), Expect = 1.660e-19 Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 1
Query: 1 GWDFVDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPGGAENNSSSS 348
G+D +D+DP+GSC PFL+AAV V DGG+L +TD+ VL G + C +YG+ H E A+R+L+H ++ A + R VVP+L +++DFYVR+FV + AE S++
Sbjct: 170 GFDVIDLDPYGSCAPFLDAAVQAVNDGGLLCVTSTDMTVLSGNY-PEVCFAKYGSMPTKAKHLHEFALRILVHAIEAAAAKYQRHVVPVLSLSIDFYVRVFVRVYKRPAEVKKSAA 284
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: F0Y1C9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1C9_AURAN) HSP 1 Score: 97.8 bits (242), Expect = 3.110e-19 Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 1
Query: 1 GWDFVDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPGGAENNSSSS 348
G+D +D+DP+GSC PFL+AAV V DGG+L +TD+ VL G + C +YG+ H E A+R+L+H ++ A + R VVP+L +++DFYVR+FV + AE S++
Sbjct: 74 GFDVIDLDPYGSCAPFLDAAVQAVNDGGLLCVTSTDMTVLSGNY-PEVCFAKYGSMPTKAKHLHEFALRILVHAIEAAAAKYQRHVVPVLSLSIDFYVRVFVRVYKRPAEVKKSAA 188
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: D7FWY9_ECTSI (N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY9_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 4.330e-19 Identity = 55/97 (56.70%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 145 CRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPGGAENNSSSSPPAHP-VPAAPLTVSQRLDSPEFRVVESS 432
C QY A+V DRP+AKE A+RVLLHR+D LARR GRRV PLLCVALDFYVRLFV I+P E+ S P P L V Q +S FR S+
Sbjct: 22 CLSQYRASVVDRPYAKEAAIRVLLHRIDKLARRGGRRVSPLLCVALDFYVRLFVLILPAPDEDADGVSTPLEKRAPPPVLWVDQARESSRFRCYNSN 118
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: A0A7K4LYM8_9AVES (TRM1 dimethyltransferase (Fragment) n=1 Tax=Crypturellus undulatus TaxID=48396 RepID=A0A7K4LYM8_9AVES) HSP 1 Score: 96.7 bits (239), Expect = 7.020e-19 Identity = 53/115 (46.09%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 4 WDFVDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPGGAENNSSSS 348
+D +D+DP+GS PFL+AAV V DGG+L TD+ VL G + C +YGA E A+RV+LH LD+ A RRVVPLL V+ DFYVR+F ++ G A+ +S+S
Sbjct: 13 FDVIDLDPYGSPAPFLDAAVQAVSDGGLLCVTCTDMAVLAGNS-PETCYSKYGAVSLKGKFCHEMALRVVLHSLDLRANCHQRRVVPLLAVSADFYVRVFARVLAGQAQAKASAS 126
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: UPI0018F3D870 (tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1 n=2 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F3D870) HSP 1 Score: 97.1 bits (240), Expect = 1.260e-18 Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 4 WDFVDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPGGAENNSSSS 348
+D +D+DP+GS PFL+AAV V +GG+L TD+ V+ G G + C +YGA P E A+R++LH LD+ A R VVPLL ++ DFYVRLFV + G A+ +S+S
Sbjct: 205 FDVIDLDPYGSPSPFLDAAVRAVSEGGLLCVTCTDMAVMAGNSG-ETCYSKYGAMSLKSPACHEMALRIVLHSLDLRANCYQRYVVPLLAISADFYVRLFVRVFTGQAKVKASAS 318
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: A0A6P8H3T9_ACTTE (tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H3T9_ACTTE) HSP 1 Score: 97.1 bits (240), Expect = 1.290e-18 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 1
Query: 13 VDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPGGAENNSSSS 348
VD+DP+GS PFL+ AV V DGG+L TD+ VLCG S AC G+YG+ E A+R+LL L+ A R R +VPLLC+++DFYVR+FV + +E S S
Sbjct: 193 VDIDPYGSAAPFLDGAVQAVTDGGLLMVTCTDMGVLCGNH-SDACYGKYGSMSLKAKFCHEMALRILLSSLESHANRYKRYIVPLLCISVDFYVRIFVQVFTSPSEVKRSPS 303
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: A0A3L7I105_CRIGR (tRNA (guanine(26)-N(2))-dimethyltransferase n=10 Tax=Cricetulus griseus TaxID=10029 RepID=A0A3L7I105_CRIGR) HSP 1 Score: 96.3 bits (238), Expect = 2.320e-18 Identity = 54/115 (46.96%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 4 WDFVDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPGGAENNSSSS 348
+D +D+DP+GS PFL+AAV V DGG+L TD+ VL G G + C +YGA E A+R++LH LD+ A R VVPLL ++ DFYVR+FV I G A+ SS+S
Sbjct: 190 FDVIDLDPYGSPAPFLDAAVQAVNDGGLLCVTCTDMAVLAGNNG-ETCYSKYGAMALKSRACHEMALRIVLHSLDLHANCYQRFVVPLLSISADFYVRVFVRIFTGQAKVKSSAS 303
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: A0A6I8PK78_ORNAN (tRNA (guanine(26)-N(2))-dimethyltransferase n=3 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8PK78_ORNAN) HSP 1 Score: 95.9 bits (237), Expect = 3.170e-18 Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 4 WDFVDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPGGAENNSSSS 348
+D +D+DP+GS PFL+AAV V +GG+L TD+ V+ G G + C G+YGA P E A+R++LH LD+ A R V PLL V+ DFYVR+FV + G A+ +S+S
Sbjct: 222 FDVIDLDPYGSPSPFLDAAVRAVSEGGLLCVTCTDMAVMAGN-GGETCYGKYGAVSLKSPACHEMALRIVLHSLDLHANCYRRYVAPLLSVSADFYVRVFVRVFTGQAKVKASAS 335
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Match: A0A6I8NW18_ORNAN (tRNA methyltransferase 1 n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8NW18_ORNAN) HSP 1 Score: 95.9 bits (237), Expect = 3.300e-18 Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 4 WDFVDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRGQYGANVADRPHAKEGAMRVLLHRLDVLARRRGRRVVPLLCVALDFYVRLFVTIVPGGAENNSSSS 348
+D +D+DP+GS PFL+AAV V +GG+L TD+ V+ G G + C G+YGA P E A+R++LH LD+ A R V PLL V+ DFYVR+FV + G A+ +S+S
Sbjct: 218 FDVIDLDPYGSPSPFLDAAVRAVSEGGLLCVTCTDMAVMAGN-GGETCYGKYGAVSLKSPACHEMALRIVLHSLDLHANCYRRYVAPLLSVSADFYVRVFVRVFTGQAKVKASAS 331 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12625.1619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12625.1619.1 >prot_S-dermatodea_contig12625.1619.1 ID=prot_S-dermatodea_contig12625.1619.1|Name=mRNA_S-dermatodea_contig12625.1619.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=323bp GWDFVDVDPFGSCMPFLEAAVAGVRDGGVLAAAATDLDVLCGKKGSQACRback to top mRNA from alignment at S-dermatodea_contig12625:2172..5252+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig12625.1619.1 ID=mRNA_S-dermatodea_contig12625.1619.1|Name=mRNA_S-dermatodea_contig12625.1619.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3081bp|location=Sequence derived from alignment at S-dermatodea_contig12625:2172..5252+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig12625:2172..5252+ >mRNA_S-dermatodea_contig12625.1619.1 ID=mRNA_S-dermatodea_contig12625.1619.1|Name=mRNA_S-dermatodea_contig12625.1619.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1938bp|location=Sequence derived from alignment at S-dermatodea_contig12625:2172..5252+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |