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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 3132 |
| Cds size | 2004 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8.16184.1 >prot_S-dermatodea_contig8.16184.1 ID=prot_S-dermatodea_contig8.16184.1|Name=mRNA_S-dermatodea_contig8.16184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=668bp
MFAPWLTGDEATAATSAAPNEDPSDVLRPGHVFSVLADPEDTWDAILDEV
RAALAARGHMALNIRSIHRVDTNDKTSRWKRKQFACKSSGHTHTKKTEHV
GKKRKSFSGKTNCPFKLTVAWPRTGPPYVTQADLVHNKECMAELKLAARG
DCVETDVVQRECGEDIRTWTLAGLPYADMFKMVQARYAPLNLAEGGRQKV
RNLAAKFKRELAAAERFNRMEMAGGAAGLADCSAAEYIISGEHCLGDTDG
ATAKISSPDVIVQDKLLNDLKGIAGKEAARLCSNLSSRLTPEMAMAVFQG
LTLQVDALLTGSGVVAAPALNGDLTHIKGVFARQAHLAVDADALVPGFFL
MADRRTIENFVPRPSSVSKHPTFSNGTDGEHPAGGASARSAPGPSRSTTG
NTPCSRSSRTVPVSDRVGPQQLRQQEMQAPQGGDHPFRRGVGTPQKEPAG
LLNSCRLAQDCRVQHDVGGARQRCQAFSAPGVAGAAANVRENSQHRALSE
GNSAVRSMAVVDNPSMRVGDGVQPPSGPEAARSPRGAVAGTPGPQGSIAG
SPRAISSEEHRMEACSARLCVGNVNAGLALTMNGAEGGQAVGVVDAFIKG
VGGVTSDPASARQSSISPNASRNIVESAAVGAGLQAGNPSEGANKPNGCV
SGAGVATGAAPAASGPA* back to topmRNA from alignment at S-dermatodea_contig8:43214..48037+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8.16184.1 ID=mRNA_S-dermatodea_contig8.16184.1|Name=mRNA_S-dermatodea_contig8.16184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4824bp|location=Sequence derived from alignment at S-dermatodea_contig8:43214..48037+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ACACGCAAATGCAACATCATCGCTTCCTTTTCGTCAATGTTTGCACCGTG
GCTGACAGGGGACGAAGCAACCGCAGCAACTAGCGCGGCGCCAAATGAGG
ACCCGTCGGACGTCCTTCGTCCTGGTCACGTGTTTTCAGTGCTGGCCGAT
CCCGAAGACACGTGGGATGCCATCTTGGACGAGGTGCGGGCGGCGTTGGC
CGCTCGGGGACACATGGCTCTCAACATCAGATCAATTCATCGGGTAAGTG
TTTTTATTGCCGACGTGGTGTCGTCAAATATACTGTTGTTTTTATCGTTG
GATGAACCCTGCTGTTGATGATATATCCGATGCACCGTCGTGTGAGCTTC
AGAAGGTCACGAACATTTAATCGGAAATTAGCGATGGGAAGTTTATAGAG
GAGAAAGATATACCGCAGAGCTAAGCCGTACAAAACCAAAAGGGACAGCA
TTTTTCTTCTTTCGCGCATTTTAAGAACCGATTCATCGTCTCCTTTAAAC
GCTGAAGACGTGGGAGTCACGATCGCGTTCCCCTTGTTCTCACCGTGCTG
GCTGTGTGGTTCGTGCGCATCTTCTGTAGCGCTCGTCCTCAAGGTGTCCG
GCTGGATTGCGAAACCGGCACCCACGCGTGCTGGTGTTAATTTAGCGTCT
TCTTTAAATTCCGGGTGACCGCAATGTCAGGTGGATACGAACGACAAGAC
AAGCAGGTGGAAACGCAAGCAATTCGCCTGCAAATCCAGCGGCCACACCC
ACACCAAGAAGACAGAACATGTTGGAAAGAAGAGGAAGAGTTTCTCCGGC
AAGGTACGACTCGCAGCGACACCACGGTGGTGGACATCATCAGCTTGTCG
TCGCAGCCTGTGGCACGGGATTTTGTTGCTCGTTGGTAGCACAGTATCGC
CGAGAGAGGAGCGCTCTTGCGTTCGGCGAGGGCAAGCCGCTTAATTGGCG
TTTTCGCATGTGTCTCGATCAGCACGTCAACTCGCCACGCGACTCCGAAA
CTGTTTCGACGGAGTATTAACGGTGGGCCGCTCTAGCCAAGCCGATTGCA
AGATGATTCCAAGTCGACACAAGTAGCAAATAAACCACGGGTTTGTAACC
TACGTGTTATAGCATTTACCTTTTCTTCCACCCCCCCCCTGAGAAGGCGA
GAAGTTATGTAGACAGGATGGGAAAAACGTTGTTTGCGCCACTCTTGGCA
CAGTATGAAGGATTGGCCATCGGCGATCGACCCTGCGGTAATAATGCTCC
GTCCTCTCGAGGACTCGTGGTCAATGATCTAACAGCTAAGGCATGCAAAA
CGTGAGCCCCCCATCCCCCCCCGCCCCTCTCATCGAATGCCTTTATGATA
TCGTTAGCCCCCCTTCCCTCCCACCGTGCTGCCTTCGACGGCGAGTGGAC
AGACTAACTGCCCGTTCAAGCTCACGGTTGCTTGGCCCCGGACTGGGCCA
CCCTACGTCACCCAGGTACCCCATACACAGTACAATTGATATCCCTTTCC
GCGGCGAACCCCAACTGTAGGGAAGGCGTGTTCGATCACAATTTTTCAGG
AGCAACGTCTCAGACTACTGTATATACATTAGTGACCCCCCGATTACACA
CTCCGATTGTCCAGTCTTCCCGCTGTGCTTTGAATGACCGTTGCTGTTGG
GCTTCCCTCGCCCCACGTGCCTCTTTGTTGGCGACCAATCCGTTGCTTTG
GTTCGTGTATGCTTACTTCACCCGGTGCATCGAACTGATACTGCTTAGAT
TGTCGGCGCTCTGGGCCATCCATGTCACTTGCGCCTCTCTCAGGCCGACC
TCGTCCACAACAAAGAGTGCATGGCGGAGTTGAAGTTGGCGGCTAGGGGG
GATTGCGTTGAGACCGACGTGGTGCAGCGCGAATGCGGCGAGGATATTCG
AACCTGGACGCTGGCGGGGTTGCCCTACGCGGACATGTTCAAGATGGTTC
AGGCCCGGTACGCCCCTCTGAATCTTGCGGAGGGCGGGCGGCAAAAGGCG
AGGCTAGGGTGTCCTCTTGTTTGTGCGCAAATGGAGAGATGCTCATGGCC
CATTTGTGCGTTTACACGACTTGCATTTCGTGTGCAGGGGTTATGCTCCG
ACAGCTACAGTCACACCTCCCGGGAGTTTCTCAACCCTGTTGGGCTAGTG
TTGTCCGTATTCCGCGGGTAAGCGCTGGACTCCGGCCCCCCGTGATTTTT
GCTCGGCAATTGGCCGCCTATCTGTAAGCCTACAGTACATACTGTGCGAG
TGTTCCTAGAACCGACGCTGCCGGGCGCTTCATTTCCCATGCACTTCTGT
TTGTGGCCCGTAATGCCCGAGTCAGGTCCGTAATCTGGCAGCAAAGTTTA
AGAGGGAGCTCGCAGCGGCCGAACGTTTCAATCGTATGGAGATGGCGGGC
GGGGCAGCGGGGCTGGCAGATTGCAGTGCAGCCGAATATATCATCAGCGG
CGAGCATTGCTTGGGGGATACCGATGGTGCCACCGCGAAGATCTCGAGCC
CAGATGTTATAGTCCAGGATAAACTGCTCAACGACTTGAAGGGTATCGCA
GGCAAAGAAGCAGCGAGACTGTGCTCCAATCTCAGCTCACGTTTGACCCC
GGAAATGGCAATGGCCGTCTTTCAGGGATTAACGCTGCAAGTGGACGCGC
TGCTAACTGGCTCTGGCGTTGTCGCGGCTCCGGCTTTGAATGGTGACCTC
ACGCACATCAAGGGTGTATTCGCCCGGCAGGCCCACCTGGCGGTTGACGC
GGACGCCCTTGTACCCGGATTTTTCCTGATGGCTGATCGCCGCACAATTG
AAAACTTCGTTCCAAGGCCGTCAAGCGTCTCCAAGCACCCGACTTTCAGC
AATGGTACTGATGGTGAGCACCCAGCAGGGGGCGCAAGCGCAAGATCAGC
GCCTGGCCCAAGCAGAAGCACCACCGGAAATACTCCGTGCTCGAGGTCCT
CGCGCACGGTACCTGTGAGTGACCGCGTCGGCCCGCAGCAGCTGCGGCAG
CAGGAGATGCAAGCACCGCAAGGGGGTGACCACCCCTTCCGGCGAGGCGT
TGGCACGCCACAGAAGGAGCCGGCGGGTCTTTTGAACTCGTGCCGCCTAG
CACAAGACTGCCGTGTGCAACACGATGTTGGAGGAGCTCGTCAACGTTGC
CAAGCGTTCAGCGCCCCTGGGGTGGCAGGCGCAGCGGCTAATGTGCGCGA
GAACTCGCAGCACCGAGCATTATCGGAGGGCAACTCGGCTGTTCGAAGCA
TGGCCGTTGTTGACAATCCTTCCATGAGGGTAGGTGACGGAGTGCAACCA
CCCTCCGGGCCGGAGGCGGCGCGCAGCCCTCGTGGTGCTGTTGCTGGCAC
CCCAGGGCCACAAGGATCGATCGCGGGCTCGCCTAGGGCGATAAGTAGCG
AAGAGCACCGGATGGAAGCATGTTCTGCTCGACTATGCGTTGGCAACGTC
AATGCGGGTCTAGCGTTAACAATGAACGGTGCCGAGGGTGGGCAGGCAGT
GGGAGTGGTGGACGCTTTCATTAAGGGCGTTGGGGGTGTGACAAGCGATC
CGGCCAGTGCGCGCCAGTCGTCAATTTCACCCAACGCGTCGCGTAATATC
GTGGAAAGCGCTGCTGTTGGAGCTGGCCTACAGGCTGGCAATCCAAGTGA
AGGTGCAAATAAACCGAATGGCTGCGTCTCTGGCGCTGGGGTCGCAACAG
GCGCAGCTCCTGCCGCCAGTGGACCGGCATGATGCAATATTGCCCTCCTA
CGCGCTTCGATCCAGGGGTGTGTCAACAACAGGCTTCCGAAAAGAAACGT
GTTCCTTACCGTGGGTTTGGCGACATTCCAGGTTCTGCGACGAGGAATGT
CGGCAAGACAACAAGCGATTGCGCTTAGAAGCGGGCATTCGGGGTGGTTG
ATACCTTGGCGTCCGGAGTTGTGCCGAGGCTGGTCCGGGAAATGACGCAA
AGGCGCCGGGGCAGAGAACACAGCAGTGCCCAATTGTTTTTTATAACGTG
GGCCCGGGTATTGAGCGGTGCGATCGTCTCTCCAGCGGCGACATATGTCA
GCTAGGAGGAGCCCTGTTTGGTTTCGTCCTCTTGGCGCGGGCATGGTAGA
GAGTACCCCCGTATTGTGGATTACTCCGGAGTATATTGTATTGGGAGTTC
ATGGAGCCAGGGGCGTGTCGTCGTACTTTTGGGATTTGCACCTTCGTCCA
TTATGTGCGAACCGAGTGCGGGTTGCACTGCTGTCTGTGCCCCTGTACAA
TGCATGCATCAAGTGTTAATATAAAGTTGGTATGGCGAGGTATTACCTGC
TGGTTTGCTGCCCTGACAGCCGTCGAAAGTAACTGAGGACCAAGAGCAGC
GTCACATACGATTTTCCCGTCCGCTAACATTGTTGAATGATGTGGGTCGC
TCATGTCAATCTCACTAAAACCCTCCTGCGGTGTCGAATTTGAAGCATGA
TGAGGACTGCATGAAAGACCGTGCGACATATAAGGAGGTGCGCATGATGA
TCCCGGCACCTCGAATCAGGCATGGACTAGAAAGCATTCAAGGACGCATG
ACGTATTTTCAACGGGAGGCATGATGGGTCTGTCACCATAGTCCGGTTTC
GACTGACTCTTGTTACTGGTGTGCTAAGTTTATTTTGTAATGTACCATTA
TTTTAAGTAGGTGTCGTACTCCTGTACCGTACAAGGATAGAGCTCTATTT
ATTATTTTCGATTCGTCTTAGTTTTTCCTTCATTACTCTGCGCATCTGAC
CGCGAGTCGAATCAGCTAATCGGCTAGAGCTCTATGCGTGTGAAAATCGA
TAAATCAATACTGGTGTCTTCCGA back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8:43214..48037+ >mRNA_S-dermatodea_contig8.16184.1 ID=mRNA_S-dermatodea_contig8.16184.1|Name=mRNA_S-dermatodea_contig8.16184.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4008bp|location=Sequence derived from alignment at S-dermatodea_contig8:43214..48037+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTTTGCACCGTGGCTGACAGGGGACGAAGCAACCGCAGCAACTAGCGC
GGCGCCAAATGAGGACCCGTCGGACGTCCTTCGTCCTGGTCACGTGTTTT
CAGTGCTGGCCGATCCCGAAGACACGTGGGATGCCATCTTGGACGAGGTG
CGGGCGGCGTTGGCCGCTCGGGGACACATGGCTCTCAACATCAGATCAAT
TCATCGGATGTTTGCACCGTGGCTGACAGGGGACGAAGCAACCGCAGCAA
CTAGCGCGGCGCCAAATGAGGACCCGTCGGACGTCCTTCGTCCTGGTCAC
GTGTTTTCAGTGCTGGCCGATCCCGAAGACACGTGGGATGCCATCTTGGA
CGAGGTGCGGGCGGCGTTGGCCGCTCGGGGACACATGGCTCTCAACATCA
GATCAATTCATCGGGTGGATACGAACGACAAGACAAGCAGGTGGAAACGC
AAGCAATTCGCCTGCAAATCCAGCGGCCACACCCACACCAAGAAGACAGA
ACATGTTGGAAAGAAGAGGAAGAGTTTCTCCGGCAAGGTGGATACGAACG
ACAAGACAAGCAGGTGGAAACGCAAGCAATTCGCCTGCAAATCCAGCGGC
CACACCCACACCAAGAAGACAGAACATGTTGGAAAGAAGAGGAAGAGTTT
CTCCGGCAAGACTAACTGCCCGTTCAAGCTCACGGTTGCTTGGCCCCGGA
CTGGGCCACCCTACGTCACCCAGACTAACTGCCCGTTCAAGCTCACGGTT
GCTTGGCCCCGGACTGGGCCACCCTACGTCACCCAGGCCGACCTCGTCCA
CAACAAAGAGTGCATGGCGGAGTTGAAGTTGGCGGCTAGGGGGGATTGCG
TTGAGACCGACGTGGTGCAGCGCGAATGCGGCGAGGATATTCGAACCTGG
ACGCTGGCGGGGTTGCCCTACGCGGACATGTTCAAGATGGTTCAGGCCCG
GTACGCCCCTCTGAATCTTGCGGAGGGCGGGCGGCAAAAGGCCGACCTCG
TCCACAACAAAGAGTGCATGGCGGAGTTGAAGTTGGCGGCTAGGGGGGAT
TGCGTTGAGACCGACGTGGTGCAGCGCGAATGCGGCGAGGATATTCGAAC
CTGGACGCTGGCGGGGTTGCCCTACGCGGACATGTTCAAGATGGTTCAGG
CCCGGTACGCCCCTCTGAATCTTGCGGAGGGCGGGCGGCAAAAGGTCCGT
AATCTGGCAGCAAAGTTTAAGAGGGAGCTCGCAGCGGCCGAACGTTTCAA
TCGTATGGAGATGGCGGGCGGGGCAGCGGGGCTGGCAGATTGCAGTGCAG
CCGAATATATCATCAGCGGCGAGCATTGCTTGGGGGATACCGATGGTGCC
ACCGCGAAGATCTCGAGCCCAGATGTTATAGTCCAGGATAAACTGCTCAA
CGACTTGAAGGGTATCGCAGGCAAAGAAGCAGCGAGACTGTGCTCCAATC
TCAGCTCACGTTTGACCCCGGAAATGGCAATGGCCGTCTTTCAGGGATTA
ACGCTGCAAGTGGACGCGCTGCTAACTGGCTCTGGCGTTGTCGCGGCTCC
GGCTTTGAATGGTGACCTCACGCACATCAAGGGTGTATTCGCCCGGCAGG
CCCACCTGGCGGTTGACGCGGACGCCCTTGTACCCGGATTTTTCCTGATG
GCTGATCGCCGCACAATTGAAAACTTCGTTCCAAGGCCGTCAAGCGTCTC
CAAGCACCCGACTTTCAGCAATGGTACTGATGGTGAGCACCCAGCAGGGG
GCGCAAGCGCAAGATCAGCGCCTGGCCCAAGCAGAAGCACCACCGGAAAT
ACTCCGTGCTCGAGGTCCTCGCGCACGGTACCTGTGAGTGACCGCGTCGG
CCCGCAGCAGCTGCGGCAGCAGGAGATGCAAGCACCGCAAGGGGGTGACC
ACCCCTTCCGGCGAGGCGTTGGCACGCCACAGAAGGAGCCGGCGGGTCTT
TTGAACTCGTGCCGCCTAGCACAAGACTGCCGTGTGCAACACGATGTTGG
AGGAGCTCGTCAACGTTGCCAAGCGTTCAGCGCCCCTGGGGTGGCAGGCG
CAGCGGCTAATGTGCGCGAGAACTCGCAGCACCGAGCATTATCGGAGGGC
AACTCGGCTGTTCGAAGCATGGCCGTTGTTGACAATCCTTCCATGAGGGT
AGGTGACGGAGTGCAACCACCCTCCGGGCCGGAGGCGGCGCGCAGCCCTC
GTGGTGCTGTTGCTGGCACCCCAGGGCCACAAGGATCGATCGCGGGCTCG
CCTAGGGCGATAAGTAGCGAAGAGCACCGGATGGAAGCATGTTCTGCTCG
ACTATGCGTTGGCAACGTCAATGCGGGTCTAGCGTTAACAATGAACGGTG
CCGAGGGTGGGCAGGCAGTGGGAGTGGTGGACGCTTTCATTAAGGGCGTT
GGGGGTGTGACAAGCGATCCGGCCAGTGCGCGCCAGTCGTCAATTTCACC
CAACGCGTCGCGTAATATCGTGGAAAGCGCTGCTGTTGGAGCTGGCCTAC
AGGCTGGCAATCCAAGTGAAGGTGCAAATAAACCGAATGGCTGCGTCTCT
GGCGCTGGGGTCGCAACAGGCGCAGCTCCTGCCGCCAGTGGACCGGCATG
AGTCCGTAATCTGGCAGCAAAGTTTAAGAGGGAGCTCGCAGCGGCCGAAC
GTTTCAATCGTATGGAGATGGCGGGCGGGGCAGCGGGGCTGGCAGATTGC
AGTGCAGCCGAATATATCATCAGCGGCGAGCATTGCTTGGGGGATACCGA
TGGTGCCACCGCGAAGATCTCGAGCCCAGATGTTATAGTCCAGGATAAAC
TGCTCAACGACTTGAAGGGTATCGCAGGCAAAGAAGCAGCGAGACTGTGC
TCCAATCTCAGCTCACGTTTGACCCCGGAAATGGCAATGGCCGTCTTTCA
GGGATTAACGCTGCAAGTGGACGCGCTGCTAACTGGCTCTGGCGTTGTCG
CGGCTCCGGCTTTGAATGGTGACCTCACGCACATCAAGGGTGTATTCGCC
CGGCAGGCCCACCTGGCGGTTGACGCGGACGCCCTTGTACCCGGATTTTT
CCTGATGGCTGATCGCCGCACAATTGAAAACTTCGTTCCAAGGCCGTCAA
GCGTCTCCAAGCACCCGACTTTCAGCAATGGTACTGATGGTGAGCACCCA
GCAGGGGGCGCAAGCGCAAGATCAGCGCCTGGCCCAAGCAGAAGCACCAC
CGGAAATACTCCGTGCTCGAGGTCCTCGCGCACGGTACCTGTGAGTGACC
GCGTCGGCCCGCAGCAGCTGCGGCAGCAGGAGATGCAAGCACCGCAAGGG
GGTGACCACCCCTTCCGGCGAGGCGTTGGCACGCCACAGAAGGAGCCGGC
GGGTCTTTTGAACTCGTGCCGCCTAGCACAAGACTGCCGTGTGCAACACG
ATGTTGGAGGAGCTCGTCAACGTTGCCAAGCGTTCAGCGCCCCTGGGGTG
GCAGGCGCAGCGGCTAATGTGCGCGAGAACTCGCAGCACCGAGCATTATC
GGAGGGCAACTCGGCTGTTCGAAGCATGGCCGTTGTTGACAATCCTTCCA
TGAGGGTAGGTGACGGAGTGCAACCACCCTCCGGGCCGGAGGCGGCGCGC
AGCCCTCGTGGTGCTGTTGCTGGCACCCCAGGGCCACAAGGATCGATCGC
GGGCTCGCCTAGGGCGATAAGTAGCGAAGAGCACCGGATGGAAGCATGTT
CTGCTCGACTATGCGTTGGCAACGTCAATGCGGGTCTAGCGTTAACAATG
AACGGTGCCGAGGGTGGGCAGGCAGTGGGAGTGGTGGACGCTTTCATTAA
GGGCGTTGGGGGTGTGACAAGCGATCCGGCCAGTGCGCGCCAGTCGTCAA
TTTCACCCAACGCGTCGCGTAATATCGTGGAAAGCGCTGCTGTTGGAGCT
GGCCTACAGGCTGGCAATCCAAGTGAAGGTGCAAATAAACCGAATGGCTG
CGTCTCTGGCGCTGGGGTCGCAACAGGCGCAGCTCCTGCCGCCAGTGGAC
CGGCATGA back to top
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