prot_S-dermatodea_contig79847.16174.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig79847.16174.1
Unique Nameprot_S-dermatodea_contig79847.16174.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length48
Homology
BLAST of mRNA_S-dermatodea_contig79847.16174.1 vs. uniprot
Match: D7G2P0_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P0_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.710e-19
Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    1 MASLWLPSNDVMCIHPGDEPIAGHQAVSRSWRSLFSSGDSRFSTSIIK 48
            MASLW+PSNDVMCIHPGDEP+ G QAV+RSWRSLF SGD RFS+S+IK
Sbjct:   12 MASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIK 59          
BLAST of mRNA_S-dermatodea_contig79847.16174.1 vs. uniprot
Match: A0A6H5L954_9PHAE (UVR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L954_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.550e-19
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    1 MASLWLPSNDVMCIHPGDEPIAGHQAVSRSWRSLFSSGDSRFSTSIIK 48
            MASLW+PSNDVMCIHPGDEP+ G QAV RSWRSLF SGD RFS+S+IK
Sbjct:  207 MASLWMPSNDVMCIHPGDEPVLGQQAVDRSWRSLFRSGDGRFSSSVIK 254          
BLAST of mRNA_S-dermatodea_contig79847.16174.1 vs. uniprot
Match: A0A836CFM1_9STRA (SnoaL-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 5.430e-13
Identity = 26/48 (54.17%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    1 MASLWLPSNDVMCIHPGDEPIAGHQAVSRSWRSLFSSGDSRFSTSIIK 48
            MASLWL S+ V+C+HPG EP+ GH+AV+++WR +F+SGD+ F +S+++
Sbjct:   73 MASLWLASDAVLCVHPGQEPLVGHEAVTKAWRGMFASGDAAFKSSVVQ 120          
BLAST of mRNA_S-dermatodea_contig79847.16174.1 vs. uniprot
Match: R1FZZ9_EMIHU (SnoaL-like domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FZZ9_EMIHU)

HSP 1 Score: 51.6 bits (122), Expect = 9.490e-7
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 0
Query:    1 MASLWLPSNDVMCIHPGDEPIAGHQAVSRSWRSLFSS 37
            M  LWLPS  ++C HPG EPI G  AV  SWR +F S
Sbjct:   57 MRRLWLPSESIVCAHPGHEPIVGFDAVISSWRDIFRS 93          
BLAST of mRNA_S-dermatodea_contig79847.16174.1 vs. uniprot
Match: A0A6V2QU24_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2QU24_EMIHU)

HSP 1 Score: 51.6 bits (122), Expect = 1.620e-6
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 0
Query:    1 MASLWLPSNDVMCIHPGDEPIAGHQAVSRSWRSLFSS 37
            M  LWLPS  ++C HPG EPI G  AV  SWR +F S
Sbjct:  102 MRRLWLPSESIVCAHPGHEPIVGFDAVISSWRDIFRS 138          
BLAST of mRNA_S-dermatodea_contig79847.16174.1 vs. uniprot
Match: A0A6V2QU63_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2QU63_EMIHU)

HSP 1 Score: 51.6 bits (122), Expect = 2.280e-6
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 0
Query:    1 MASLWLPSNDVMCIHPGDEPIAGHQAVSRSWRSLFSS 37
            M  LWLPS  ++C HPG EPI G  AV  SWR +F S
Sbjct:  157 MRRLWLPSESIVCAHPGHEPIVGFDAVISSWRDIFRS 193          
BLAST of mRNA_S-dermatodea_contig79847.16174.1 vs. uniprot
Match: A0A7S3WBM6_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WBM6_EMIHU)

HSP 1 Score: 51.6 bits (122), Expect = 2.530e-6
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 0
Query:    1 MASLWLPSNDVMCIHPGDEPIAGHQAVSRSWRSLFSS 37
            M  LWLPS  ++C HPG EPI G  AV  SWR +F S
Sbjct:  196 MRRLWLPSESIVCAHPGHEPIVGFDAVISSWRDIFRS 232          
BLAST of mRNA_S-dermatodea_contig79847.16174.1 vs. uniprot
Match: A0A2E7V8C3_9PROT (SnoaL-like domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7V8C3_9PROT)

HSP 1 Score: 47.8 bits (112), Expect = 2.010e-5
Identity = 18/40 (45.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    1 MASLWLPSNDVMCIHPGDEPIAGHQAVSRSWRSLFSSGDS 40
            M  +W  S +++CIHPG EPI G +AV +SW+++ + G S
Sbjct:   26 MKQVWSSSEEIVCIHPGWEPIYGQEAVMQSWKNILTGGHS 65          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig79847.16174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G2P0_ECTSI1.710e-1981.25SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5L954_9PHAE2.550e-1981.25UVR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CFM1_9STRA5.430e-1354.17SnoaL-like domain-containing protein n=1 Tax=Tribo... [more]
R1FZZ9_EMIHU9.490e-756.76SnoaL-like domain-containing protein n=1 Tax=Emili... [more]
A0A6V2QU24_EMIHU1.620e-656.76Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A6V2QU63_EMIHU2.280e-656.76Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S3WBM6_EMIHU2.530e-656.76Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A2E7V8C3_9PROT2.010e-545.00SnoaL-like domain-containing protein n=1 Tax=Rhodo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 1..48
e-value: 1.4E-11
score: 46.2
IPR037401SnoaL-like domainPFAMPF13474SnoaL_3coord: 1..38
e-value: 7.7E-5
score: 22.9
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig79847contigS-dermatodea_contig79847:475..618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig79847.16174.1mRNA_S-dermatodea_contig79847.16174.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig79847 475..633 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig79847.16174.1 ID=prot_S-dermatodea_contig79847.16174.1|Name=mRNA_S-dermatodea_contig79847.16174.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=48bp
MASLWLPSNDVMCIHPGDEPIAGHQAVSRSWRSLFSSGDSRFSTSIIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037401SnoaL-like
IPR032710NTF2-like_dom_sf