prot_S-dermatodea_contig79784.16171.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig79784.16171.1
Unique Nameprot_S-dermatodea_contig79784.16171.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length212
Homology
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: A0A8F0F772_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F772_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 2.920e-89
Identity = 134/210 (63.81%), Postives = 171/210 (81.43%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIVEEEVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQKSSKIRQ 210
            MQ+FPF+LEQL+I+K+I+ EKSFK AA KLYLSQPA++LQ++ LE KL F IF+RSKKQICFTRTG+L+LDY+T+IL+LC EA+ A +   ++ +N+LI+GSS   GTYLLPKIIGLFC+RYSYANI LE+NST  I+WGVA GEID+GIV   V NQ    ++IIP+VEDELVLI+P+F+  N  K I KE+IY+L FIAL K S +R+
Sbjct:    1 MQYFPFSLEQLRILKSIKAEKSFKAAAKKLYLSQPAVTLQVQNLEKKLDFPIFDRSKKQICFTRTGELVLDYATRILVLCEEADNAIMYLKDVNRNKLIIGSSNTIGTYLLPKIIGLFCRRYSYANINLEVNSTYPIAWGVATGEIDLGIVGGRVTNQFSKSIQIIPFVEDELVLIMPKFHPFNTFKLIRKEDIYELNFIALNKQSIVRE 210          
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: A0A8F0JZN2_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZN2_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 1.900e-80
Identity = 124/211 (58.77%), Postives = 167/211 (79.15%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIVEEEVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQKSSKIRQL 211
            M++FPF+LEQL+I++AI+ EKS K AA+KLY+SQPAISLQI++LE KL   +FER +KQ+CFT TG+L+LDY+ +IL+LC EA ++ L   +IK+ +LI+GSS   GTYLLPKIIGLFC+RYSYAN+KLEI+ST+R SW VANG+IDIGIV   +P +L+  L+I  YV DE+ LILP+F++L     I K ++YDLKFI L+  S  R++
Sbjct:    1 MRYFPFSLEQLRILQAIKNEKSLKQAAEKLYISQPAISLQIQKLESKLDSPLFEREQKQVCFTSTGELILDYAARILVLCEEANKSLLYLKDIKRTKLIIGSSNTTGTYLLPKIIGLFCRRYSYANVKLEISSTNRTSWSVANGQIDIGIVGGYIPKELHQSLQIKKYVNDEIGLILPKFHKLGRLNSISKHDLYDLKFITLKTHSLSRKV 211          
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: A0A8F0F6V8_AKKLU (Probable RuBisCO transcriptional regulator n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6V8_AKKLU)

HSP 1 Score: 231 bits (588), Expect = 2.880e-72
Identity = 112/204 (54.90%), Postives = 157/204 (76.96%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIVEE-EVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQ 203
            M++FPFNLEQL+I++AI+TE + K AA KLYLSQPA+SLQI++LEY++   I +R+KKQI  T TG+LLLDY+ +IL LC EA++A +    +K+  L +G+++  GTY+LPKII LFCKRY Y  IKLEI+ T+ ISW + NG+ID+GIVEE E+P +LY  L   PY ++E+VLILP+++ L   + I +EN+Y+L FIAL+
Sbjct:    1 MKYFPFNLEQLRIIQAIKTEATIKQAATKLYLSQPALSLQIQKLEYEIDSPILDRNKKQIYLTLTGELLLDYADRILSLCEEADKAIIYLKKLKRISLTIGTNETVGTYILPKIINLFCKRYPYTRIKLEIHCTNCISWNIVNGKIDLGIVEEDEIPKELYNSLSSKPYFQEEIVLILPKYHELKNVRNITRENLYNLNFIALK 204          
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: A0A7U3S1F0_9STRA (Probable RuBisCO transcriptional regulator n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3S1F0_9STRA)

HSP 1 Score: 227 bits (578), Expect = 8.030e-71
Identity = 115/211 (54.50%), Postives = 155/211 (73.46%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIVEEEVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQKSSKIRQL 211
            MQ+FPFNL+QL+I+K I +E SFK AA  LY+SQPAISLQIR++E KLG  +FER K+QI  T+ GKLL+ Y  +IL LC E+  A  + + +K+  LI+G+S+  GTYLLPK+IGLF  RY   N+KL++NS+ RISWGVANG+IDI I+   +PN+L   LK+ PYVEDEL LI P+ +  +   +I KE++YDL FI L+  S +R+L
Sbjct:    1 MQNFPFNLDQLRILKIIVSEGSFKRAAKTLYVSQPAISLQIRKVESKLGLPLFERDKRQIRLTKAGKLLVQYGNRILNLCDESFRAVEDLHQLKRGTLIIGASKSTGTYLLPKLIGLFRHRYPKINVKLKVNSSHRISWGVANGQIDIAIMGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKEDLYDLNFITLETDSMLRKL 211          
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: A0A0R6LUS1_UNDPI (Probable RuBisCO transcriptional regulator n=29 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUS1_UNDPI)

HSP 1 Score: 221 bits (562), Expect = 2.430e-68
Identity = 107/204 (52.45%), Postives = 155/204 (75.98%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIVEEE-VPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQ 203
            M++FPF+LEQL+I++AI+ E + K AA +LYLSQPA+SLQI++LEY++   I +R KKQI FT TG+L+LDY+ +IL LC EA++A +    +K+  L +GS+++ GTY+LPKII LFC+RYSY ++KLEI+ST+ ISW + NG++DIGIVEEE +P +LY  L   PY ++E+VLILP+ ++      I  E +Y+L FI L+
Sbjct:    1 MKYFPFSLEQLRIIQAIKNEATIKQAAKRLYLSQPALSLQIQKLEYEIDSPILDRRKKQIYFTFTGELILDYADRILRLCEEADKAIVYLKKLKRISLTIGSNEIVGTYILPKIIDLFCRRYSYIHVKLEIDSTNCISWNIVNGKVDIGIVEEEEIPKELYSSLYSTPYFQEEIVLILPKSHKFKDVYSITSEKLYNLDFITLK 204          
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: A0A8F0F7X1_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F7X1_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 3.440e-68
Identity = 107/204 (52.45%), Postives = 152/204 (74.51%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIVEE-EVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQ 203
            M++FPF+LEQL+IV+A++ E + K AA KLYLSQPA+SLQI++LEY++   I +R+KKQI  T TG+LLLDY+ +IL LC EA++A +    +K+  L +G+++  GTY+LPKII LFC RY Y  IKLEIN  + ISW + NG+ID+GIVEE E+P +LY  L   PY ++E+VLILP+++ L   + I +E +Y+L FI L+
Sbjct:    1 MKYFPFSLEQLRIVQAVKNEATIKQAAKKLYLSQPALSLQIQKLEYEIDSPILDRNKKQIYLTLTGELLLDYADRILNLCEEADKAIIYLKKLKRVSLTIGTNETVGTYILPKIINLFCTRYPYTRIKLEINCANCISWNIVNGKIDLGIVEEDEIPKELYNSLSCRPYFQEEMVLILPKYHELKDVRNISREKLYNLNFITLK 204          
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: A0A8F0F9M1_9PHAE (Probable RuBisCO transcriptional regulator n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9M1_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 7.400e-67
Identity = 112/212 (52.83%), Postives = 156/212 (73.58%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIV-EEEVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQKSSKIRQL 211
            M++ PF+LEQL+ ++ I+ E + K AA KLYLSQPA+SLQI++LE  +   I +R K++I FTRTG+L+LDY+ KIL LC EA++A L   N+K+  L +GS+   G Y+LPKII LFCKRYSYA+IKLEI+ T+ I+W + NG+IDIGIV EEE+P +LY  L   P+  +E+VLILP+ Y+L  S+ I K N+Y+L FI L+   + R+L
Sbjct:    1 MKYLPFSLEQLRTIQTIKNEGTVKQAAKKLYLSQPALSLQIKKLESGIKSPILDRKKRKIYFTRTGELILDYADKILNLCEEADKAILYFKNLKRISLNIGSNYTIGKYILPKIINLFCKRYSYAHIKLEISDTNTIAWDIINGKIDIGIVIEEELPKELYSSLYGTPFFLEEIVLILPKSYKLKGSRNITKTNLYNLNFITLKPHLRRRKL 212          
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: B2XTB6_HETAK (Probable RuBisCO transcriptional regulator n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTB6_HETAK)

HSP 1 Score: 214 bits (546), Expect = 3.600e-66
Identity = 107/211 (50.71%), Postives = 149/211 (70.62%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIVEEEVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQKSSKIRQL 211
            M   PF L+QL+I++AI  E SFK AA+ LYLSQPA+SLQI+ LE KL F +FER K  +  T +G+LLL Y  +IL LC E   A L+  N++   LIVG+SQ  GTYL+P++IGLF +RY    I+L+++ST R++W VANG+IDIGI+   +P +L  +LKI PY EDEL LILP+ +  +   +I K+++Y L+FI L K+S IR++
Sbjct:    1 MSDLPFTLDQLRILRAIAIEGSFKKAAESLYLSQPALSLQIKNLEKKLNFALFERQKNTVKLTDSGQLLLRYGNRILGLCEETYRALLDLRNLQSGTLIVGASQTTGTYLVPRLIGLFRQRYPQVTIQLQVHSTRRVAWAVANGQIDIGIIGGAIPYELNDILKITPYAEDELALILPKSHSFSEVTKIKKDDLYSLQFITLDKNSTIRRV 211          
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: A0A3G3MH43_9FLOR (Probable RuBisCO transcriptional regulator n=1 Tax=Neogoniolithon spectabile TaxID=231755 RepID=A0A3G3MH43_9FLOR)

HSP 1 Score: 210 bits (535), Expect = 2.960e-64
Identity = 107/211 (50.71%), Postives = 147/211 (69.67%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIVEEEVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQKSSKIRQL 211
            M+  PF+L+QL+I+KAI  E SFK AAD LY+SQPAISLQ++ LE +L   IFER  K+ C T  G LLL YST+IL LC E   A  +  N++   LI+G+SQ  GTYL+P++IGLF +RY   N++L+++ST  ISW VANG++D+ I+  EVPN+L  +L++  Y EDEL LI+P  +    S  I KE++Y L+FIAL   S IR++
Sbjct:    1 MRDLPFSLDQLRILKAIVKEGSFKKAADSLYVSQPAISLQVQNLEKQLNLPIFERRHKKACLTEGGHLLLHYSTRILALCEETCRALEDLQNLQGGTLIIGASQTTGTYLMPRLIGLFRQRYPQVNVQLQVHSTRLISWCVANGQVDLAIIGGEVPNELKNILEVTSYAEDELALIIPTCHSFANSYNIQKEDLYRLRFIALDTQSTIRKV 211          
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Match: A0A1C9CAL1_9FLOR (Probable RuBisCO transcriptional regulator n=1 Tax=Thorea hispida TaxID=202687 RepID=A0A1C9CAL1_9FLOR)

HSP 1 Score: 206 bits (525), Expect = 8.720e-63
Identity = 107/211 (50.71%), Postives = 143/211 (67.77%), Query Frame = 0
Query:    1 MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGFLIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIVGSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGIVEEEVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFIALQKSSKIRQL 211
            MQ  PF+L+QLKI+KAI  E SF+ AAD LY+SQPAISLQI+ LE +L   IFER  K+   T  G LLL Y  +IL LC E   A  +  N+K  RLI+G+SQ  GTYL+PK+IGLF +RY    ++L+++ST  ISW VANG++DI I+  E+P++L  +L++  Y EDEL LILP  +       I KE++Y L+FIAL   S IR++
Sbjct:    1 MQDLPFSLDQLKILKAIIKEGSFRKAADNLYVSQPAISLQIQNLEKQLNLPIFERDNKRTRLTEAGSLLLRYGNRILALCEETCRALEDLQNLKGGRLIIGASQTTGTYLMPKLIGLFRQRYPQVTVQLQVHSTRLISWSVANGQVDIAIIGGEIPSELEDILQVTSYAEDELALILPTSHIFTKMAHIQKEDLYRLRFIALDTQSTIRKV 211          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig79784.16171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F772_9PHAE2.920e-8963.81Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0JZN2_9PHAE1.900e-8058.77Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0F6V8_AKKLU2.880e-7254.90Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A7U3S1F0_9STRA8.030e-7154.50Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A0R6LUS1_UNDPI2.430e-6852.45Probable RuBisCO transcriptional regulator n=29 Ta... [more]
A0A8F0F7X1_9PHAE3.440e-6852.45Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A8F0F9M1_9PHAE7.400e-6752.83Probable RuBisCO transcriptional regulator n=1 Tax... [more]
B2XTB6_HETAK3.600e-6650.71Probable RuBisCO transcriptional regulator n=2 Tax... [more]
A0A3G3MH43_9FLOR2.960e-6450.71Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A1C9CAL1_9FLOR8.720e-6350.71Probable RuBisCO transcriptional regulator n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000847Transcription regulator HTH, LysRPRINTSPR00039HTHLYSRcoord: 23..34
score: 42.93
coord: 44..55
score: 39.67
coord: 34..44
score: 52.9
IPR000847Transcription regulator HTH, LysRPFAMPF00126HTH_1coord: 8..66
e-value: 5.1E-15
score: 55.2
IPR000847Transcription regulator HTH, LysRPROSITEPS50931HTH_LYSRcoord: 6..63
score: 22.184
NoneNo IPR availableGENE3D3.40.190.290coord: 97..212
e-value: 3.9E-18
score: 67.6
NoneNo IPR availablePANTHERPTHR30126UNCHARACTERIZED HTH-TYPE TRANSCRIPTIONAL REGULATOR YEIE-RELATEDcoord: 7..212
NoneNo IPR availablePANTHERPTHR30126:SF39coord: 7..212
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 96..211
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 6..96
e-value: 1.1E-20
score: 75.2
IPR005119LysR, substrate-bindingPFAMPF03466LysR_substratecoord: 96..211
e-value: 1.9E-12
score: 47.0
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 4..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig79784contigS-dermatodea_contig79784:1..636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig79784.16171.1mRNA_S-dermatodea_contig79784.16171.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig79784 1..636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig79784.16171.1 ID=prot_S-dermatodea_contig79784.16171.1|Name=mRNA_S-dermatodea_contig79784.16171.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=212bp
MQHFPFNLEQLKIVKAIETEKSFKGAADKLYLSQPAISLQIRRLEYKLGF
LIFERSKKQICFTRTGKLLLDYSTKILLLCAEAEEAFLNANNIKKNRLIV
GSSQVAGTYLLPKIIGLFCKRYSYANIKLEINSTSRISWGVANGEIDIGI
VEEEVPNQLYGVLKIIPYVEDELVLILPRFYRLNISKRILKENIYDLKFI
ALQKSSKIRQLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000847Tscrpt_reg_HTH_LysR
IPR036388WH-like_DNA-bd_sf
IPR005119LysR_subst-bd
IPR036390WH_DNA-bd_sf