prot_S-dermatodea_contig7977.16169.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig7977.16169.1
Unique Nameprot_S-dermatodea_contig7977.16169.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length295
Homology
BLAST of mRNA_S-dermatodea_contig7977.16169.1 vs. uniprot
Match: A0A6H5K8F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F0_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 6.820e-134
Identity = 206/274 (75.18%), Postives = 239/274 (87.23%), Query Frame = 0
Query:   21 NPLLGSFLCWFFARMITKRARVVEGLEVHVDARSNRDAMSGLLQEVGITFNHLELENIRISGGTVMTIRGLDLKVMTLLWRRFRSFKKPFEVSGSYVFTSEDLASSPMVRRLVDSMMNATLRKLETLATDSPSLSKSIITISQVTAKRSRLVIDGDMMYDNVRVPFTYRTSIGVKGKGHVVYLKDPEVFWENVGGSLSLPLLPLQTFDIDIGDGARIESIRIVDGQVAVRARFVLSPFPPLVVASMFKRAAFRYDVGEKLSVIFGNLVQNMKII 294
            +PL    L W   R IT RA +VEGLEV VDARSNR+AMSGLLQ VGITFNHLELEN++ISGG  M I  LDLKVMTLLW+RF SFKKPFE+ GSYV TSEDL++S +VRRLV +MMN+TLRKLETLAT+   L KS ITI+QV+AKRSRLVI+G+M YD+ +VPFTYRTSIGVKGKGHVVYLKD EVFWEN+GGSLSLPLLPL+TFD+D+G+GARIESIRIV+GQVA++AR V+SPFPPL+VAS+ KRAAFR+DV E+LSV FGNLVQNMKI+
Sbjct:  495 DPLWSKILVWVLERAITNRAMLVEGLEVSVDARSNREAMSGLLQSVGITFNHLELENLQISGGARMNITNLDLKVMTLLWKRFGSFKKPFEIEGSYVLTSEDLSTSSIVRRLVTNMMNSTLRKLETLATEP--LRKSSITITQVSAKRSRLVIEGEMAYDSAKVPFTYRTSIGVKGKGHVVYLKDAEVFWENIGGSLSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASVRKRAAFRFDVAERLSVTFGNLVQNMKIL 766          
BLAST of mRNA_S-dermatodea_contig7977.16169.1 vs. uniprot
Match: D7G8F0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F0_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 1.350e-110
Identity = 181/273 (66.30%), Postives = 208/273 (76.19%), Query Frame = 0
Query:   21 NPLLGSFLCWFFARMITKRARVVEGLEVHVDARSNRDAMSGLLQEVGITFNHLELENIRISGGTVMTIRGLDLKVMTLLWRRFRSFKKPFEVSGSYVFTSEDLASSPMVRRLVDSMMNATLRKLETLATDSPSLSKSIITISQVTAKRSRLVIDGDMMYDNVRVPFTYRTSIGVKGKGHVVYLKDPEVFWENVGGSLSLPLLPLQTFDIDIGDGARIESIRIVDGQVAVRARFVLSPFPPLVVASMFKRAAFRYDVGEKLSVIFGNLVQNMKI 293
            +PL    L W F R IT RA +VEGLE                                ISGG  M I  LDLKVMTLLW+RF SFKKPFE+ GSYV TSEDL++S MVRRLV +MMN+TLRKLETLAT+   L KS ITI+QV AKRSRLVI+G+M YD+ +VPFTYRTSIGVKGKGHVVYLKD EVFWENVGGSLSLPLLPL+TFD+D+G+GARIESIRIV+GQVA++AR V+SPFPPL+VAS+ KRAAFR+DV E+LSV FGNLVQN+KI
Sbjct:  268 DPLWSKILVWVFERAITNRAMLVEGLE--------------------------------ISGGARMNITNLDLKVMTLLWKRFGSFKKPFEIEGSYVLTSEDLSTSSMVRRLVTNMMNSTLRKLETLATEP--LRKSSITITQVLAKRSRLVIEGEMAYDSAKVPFTYRTSIGVKGKGHVVYLKDAEVFWENVGGSLSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASLRKRAAFRFDVAERLSVTFGNLVQNIKI 506          
BLAST of mRNA_S-dermatodea_contig7977.16169.1 vs. uniprot
Match: A0A835YIN5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN5_9STRA)

HSP 1 Score: 171 bits (432), Expect = 5.190e-47
Identity = 106/297 (35.69%), Postives = 162/297 (54.55%), Query Frame = 0
Query:    4 ATAAKTAGSFKDGKGDDN---PLLGSFLCWFFARMITKRARVVEGLEVHVDARSNRDAMSGLLQEVGITFNHLELENIRISGGTVMTIRGLDLKVMTLLWRRFRSFKKPFEVSGSYVFTSEDLASSPMVRRLVDSMMNATLRKLETLATDSPSLSKSIITISQVTAKRSRLVIDGDMMYDNVRVPFTYRTSIGVKGKGHVVYLKDPEVFWENVGGSLSLPL-------LPLQTFDIDIGDGARIESIRIVDGQVAVRARFVLSPFPPLVVASMFKRAAFRYDVGEKLSVIFGNLVQN 290
            A   + AG   D +  D+   P+ G  L W  A++I KRA  VEGL++ V A SNR A+SG L+ V   F  L L  I+I+GG  M + G+DLK++ L+ RR  +FKKPF+V G +VFTS D  +S  +R +V +++ A+            +LS   + +++V+ K  R+VID      +V   F+   ++     GHVV L+   + + N  G             LP      D+GD  RIE++ I +G+  +R  FV++P PPL+VA + KR   RYDVGE++S I  +++ N
Sbjct:   82 ADLIEEAGPKLDERPSDDAPIPVTGKALSWMLAQIIYKRALRVEGLDLLVQAASNRKALSGNLKTVWCKFRTLALPAIQITGGANMVVTGVDLKMLLLMHRRLGAFKKPFQVRGEWVFTSNDFVASNAIRNMVQAILTASFN----------ALSLGAVRVTRVSIKGDRIVIDAR---SSVLQRFSCSANLATSSDGHVVSLRS--LRYSNQAGEFLFQTPWQLAATLPRDLVSCDMGDNTRIEALTIRNGRATLRGCFVVTPTPPLIVADVGKRGMVRYDVGERISAIVSDVLDN 363          
BLAST of mRNA_S-dermatodea_contig7977.16169.1 vs. uniprot
Match: A0A6H5K9J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J0_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.950e-23
Identity = 73/237 (30.80%), Postives = 106/237 (44.73%), Query Frame = 0
Query:   91 LDLKVMTLLWRRFRSFKKPFEVSGSYVFTSEDLASSPMVRRLVDSMMNATLRKLETLA--------------------------------------TDSPSLSKSIITISQVTAKRSRLVIDGDMMYDN--VRVPFTYRTSIGVKGKGHVVYLKDPEVFWENVGGSLSLPLLPLQTFDIDIGDGARIESIRIVDGQVAVRARFVLSPFPPLVVASM-FKRAAFRYDVGEKLSVIFGN 286
            L L ++   WRR R  ++P E  G   FT  D+A SP +RRL   ++N  L+     A                                             +  +++  V    ++L I+G+M      +RVPF Y  S+     GHV+Y K   V+W   GG + LP++PLQ+F ID+GD ARIE +RI  G ++V  RF+L+  P   VA    KR    YD+ E LS +  N
Sbjct:  186 LTLGLLPGPWRRLRRLRRPCEAIGRSTFTDVDVAYSPAIRRLAQRVVNHALQPRAKRAGVVAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAQQQGRLEPSVSVLGVRVHGNKLAIEGEMTNGGTFLRVPFRYHFSLSASQDGHVLYFKGSSVYWGTPGGHVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSVGGRFILTNTPGFTVALPGLKRGDINYDLAEGLSRLVSN 422          
BLAST of mRNA_S-dermatodea_contig7977.16169.1 vs. uniprot
Match: D8LB91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB91_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.530e-19
Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 0
Query:  159 ITISQVTAKRSRLVIDGDMMYDN--VRVPFTYRTSIGVKGKGHVVYLKDPEVFWENVGGSLSLPLLPLQTFDIDIGDGARIESIRIVDGQVAVRARFVLSPFPPLVVASM-FKRAAFRYDVGEKLSVIFGN 286
            +++  V    ++L I+G+M      +RVPF Y  S+     GHV+Y K   V+W   GG + LP++PLQ+F ID+GD ARIE +RI  G +++  RF+L+  P   VA    KR    YD+ E LS +  N
Sbjct:  201 VSVLGVRVHGNKLAIEGEMTNGGTFLRVPFRYHFSLSASADGHVLYFKGSSVYWGTPGGHVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSLGGRFILTNTPGFTVALPGLKRGDINYDLAESLSRLVSN 331          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig7977.16169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K8F0_9PHAE6.820e-13475.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8F0_ECTSI1.350e-11066.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIN5_9STRA5.190e-4735.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K9J0_9PHAE2.950e-2330.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB91_ECTSI1.530e-1938.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig7977contigS-dermatodea_contig7977:1815..5473 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig7977.16169.1mRNA_S-dermatodea_contig7977.16169.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig7977 1794..5756 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig7977.16169.1 ID=prot_S-dermatodea_contig7977.16169.1|Name=mRNA_S-dermatodea_contig7977.16169.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=295bp
MTVATAAKTAGSFKDGKGDDNPLLGSFLCWFFARMITKRARVVEGLEVHV
DARSNRDAMSGLLQEVGITFNHLELENIRISGGTVMTIRGLDLKVMTLLW
RRFRSFKKPFEVSGSYVFTSEDLASSPMVRRLVDSMMNATLRKLETLATD
SPSLSKSIITISQVTAKRSRLVIDGDMMYDNVRVPFTYRTSIGVKGKGHV
VYLKDPEVFWENVGGSLSLPLLPLQTFDIDIGDGARIESIRIVDGQVAVR
ARFVLSPFPPLVVASMFKRAAFRYDVGEKLSVIFGNLVQNMKII*
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