prot_S-dermatodea_contig7974.16163.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig7974.16163.1
Unique Nameprot_S-dermatodea_contig7974.16163.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length345
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig7974.16163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 164..343
e-value: 1.8E-8
score: 35.2
IPR008615FNIPPFAMPF05725FNIPcoord: 250..293
e-value: 9.2E-6
score: 25.7
coord: 74..116
e-value: 5.6E-8
score: 32.8
coord: 206..248
e-value: 1.0E-8
score: 35.2
coord: 118..158
e-value: 5.4E-6
score: 26.5
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 192..337
coord: 39..254
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 17..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig7974contigS-dermatodea_contig7974:732..1766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig7974.16163.1mRNA_S-dermatodea_contig7974.16163.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig7974 480..2498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig7974.16163.1 ID=prot_S-dermatodea_contig7974.16163.1|Name=mRNA_S-dermatodea_contig7974.16163.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=345bp
MVTWHLPTLALADARDRFTGLEQLFLVGDLDTRVDRILWPRGLQQLSFVT
KFNQPIENVDWLPSLQQLTFSREFNQPIERVVWPANLQELTFGGVFNQPI
ENVVWPCSLLRLTFGEDFNQPIGRAAWPANLKELLFGYAFNQPIEHVVWP
YSLLQLAFWAEFNQPIENVAWPCALQLLNVGSHFDHPIDGVTWPASLQYL
HFGDDFNQPIDGVTWPASLQELTFGDAFNQQIDGVSWPASLQQLTFSDAF
NYPIDGITWPASLRRLEFGHAFNQPIDGVTWPASLQDLEFGCCFNQPLDR
VTWPASLKNLGFDGCFKQPIDEVAWPVSLHHLRIGHRSFSLANI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP