mRNA_S-dermatodea_contig123.1444.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: D7FRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA0_ECTSI) HSP 1 Score: 912 bits (2358), Expect = 0.000e+0 Identity = 579/941 (61.53%), Postives = 638/941 (67.80%), Query Frame = 1
Query: 454 EKSDGLISELNLFEASGA-AVGAACGDGAGDEELAAMAWPTTRLVRSASMSSTGSAEAEESEEWLASLVEKSKAAGXXXXXXXGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQTQPSASGSQGLSDESGTDNDSKEPSMRGPASQHHRRRDSTPVAFGDLSLLHPGGERLTSPPQPMHARRHSAAGALTGLLNESPATEQSRRRRI-QEDMDAVRSARNQVMQAGQTIFGVDNGAHARGEHEMAHMTRAPPGTTRGQTSIARDGTHESESRVNSLPVVNELQAVKAEELEQTKIGEDHSEGQGRPHTRLQGSRPPH-SAEGQGGGRSHSHMPHRMPPPQHPLPRPPGHPPRPFVGASGRGGXXXXXXXXXXXXXMGALLGVASQLRPPRIDTNSSVKRESATGNASLSQLLLTSPFGSNDHARFTAS-DALSQPSANNVDMDAPAPSTGQSYSSAPPESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSISKRGTATTSTAPGSTPAPSSASSPEGLAFMRSPMFAKGMSPLVPASSTATAASSSGNGPSSPPFPGMDDMMVVDQHAAASGDGSRGASAAGTSSVSXXXXXXVATAPAHASG-HDMTSLQMHRVLSAPLLSPPANSDGARSREGRHSAGPDQNQARLPPLRQVSDFMSASATAGDGXXXXXXXXRGSTSXVDLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTEPMEMEVSRRNEWSGGVHGRHRPPSR 3261
E DGLI+E NLF+A+G + G G DE+LA MAW +RLVRS SMSSTGSA+AEESEEWL SLVEKSKAAG GPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGT RSDVQCLHRWNKVLRPGLHKGPWTEEED+IVRECVE SGAQK VKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQ QP ASGSQG+SDESGTDND+KEPS R A DSTP AFGD LLHPGGE+LTSPPQPMHARRHSAAGALTG+L++SP +E+ RRR+ QED++A RSA+ Q G R + + ESE +SL VVNELQ VK EELEQ ++ SE Q H PH SAE GGR SHM HRM PPQHP R PGHPPRPF G S R MGALLGVASQLRPPRIDTNS+VKRES G ASLSQLLLTSPFGSND ARF A+ DA+ QP+ + +M+ G+SYSSA ESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSI KRG A+TS+A +T SSASSP GLAFMRSP FAKG++P+ +TA+A GNG SSP F D M+VD H G GAS + VA AHAS HDM +RVL AP +S ANS+ A Q+RLPPLRQ D + G G + +S +DLAG XXXXX A++TEPM+ + RR++W+ + GRHRPPSR
Sbjct: 9 ENDDGLIAEANLFDAAGGGSEGDLVGVAPADEDLA-MAWSGSRLVRSTSMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQK-VKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQP-ASGSQGMSDESGTDNDTKEPSTRAAAXXXXXXHDSTPSAFGDDDLLHPGGEQLTSPPQPMHARRHSAAGALTGMLSDSPESERRFRRRMGQEDVEA-RSAQAQ-------------------------------GAVRARAGASERAGRESEKHTSSLAVVNELQTVKTEELEQPATTKERSEKQDHSHLLA-----PHGSAEAPAGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFAGPS-RSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNSTVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAEMETSTAPAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSSASAAT---SSASSPGGLAFMRSP-FAKGLAPVGSGGATASA----GNGSSSPAF--EVDAMMVDHHRV----GGTGASISAA----------VAAVEAHASSDHDM-----NRVLPAPGVSTAANSEAA------------MEQSRLPPLRQ--DPSDGRNSGGFGRVNGSSMGKNGSS-LDLAGPNPPAVPASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXX---AMQTEPMD-DGGRRSDWNQRM-GRHRPPSR 859
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA) HSP 1 Score: 273 bits (699), Expect = 4.060e-82 Identity = 127/162 (78.40%), Postives = 139/162 (85.80%), Query Frame = 1
Query: 700 GPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 1185
GP GGKWTKEED LR IVE HGA+NWR VAE LG R+DVQCLHRWNKVLRPGLHKGPWTEEED IVR+ V + GA K VKWS +A++L GRIGKQCRERWFNHLDP+I KGEW+PEEDRIVF AQ GNRW +IAKLLPGRTEN+VKNR+NSSARKKWL
Sbjct: 4 GP-GGKWTKEEDASLRVIVEQHGAKNWRKVAELLGDTRTDVQCLHRWNKVLRPGLHKGPWTEEEDGIVRDMVLMYGAGK-VKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKKWL 163
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: A0A7S2R561_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R561_9STRA) HSP 1 Score: 277 bits (709), Expect = 3.070e-77 Identity = 123/164 (75.00%), Postives = 141/164 (85.98%), Query Frame = 1
Query: 703 PKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQN 1194
P GGKW++EED +LR IVE HGA+NW+ VAE LG RSDVQCLHRWNKVLRPGLHKGPWTE+ED IV + V G +KWSV+A+ LPGRIGKQCRERWFNHLDPSIKKGEW+PEED+++F AQ +GNRWCEIAKLLPGRTENAVKNR+NSSARK+WL +N
Sbjct: 144 PIGGKWSREEDDKLRAIVEQHGAKNWKKVAELLGPVRSDVQCLHRWNKVLRPGLHKGPWTEDEDRIVSDMVLAHGVGN-IKWSVIAAELPGRIGKQCRERWFNHLDPSIKKGEWTPEEDKVLFEAQLVVGNRWCEIAKLLPGRTENAVKNRWNSSARKRWLQEN 306
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: A0A835YLN0_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN0_9STRA) HSP 1 Score: 264 bits (675), Expect = 7.930e-77 Identity = 119/192 (61.98%), Postives = 147/192 (76.56%), Query Frame = 1
Query: 718 WTKEEDTRLREIVEHHGARNWRMVAEQLGT-------PRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQ-LTPDLLNKLKEAYEQMQTQ 1269
WT EED RLR +V+ HG+RNW++VA++L PR+DVQCL+RW K LRPGLHKG WTE ED +VRE VE G K VKWS +A+RLPGRIGKQCRERWFNHLDP++K+ W+PEED ++F AQA +GNRWCEIAKLLPGRTENAVKNRFNSSA+KKW+ +N + +T LL+ ++ YE Q +
Sbjct: 36 WTSEEDARLRAVVDKHGSRNWKLVADELAQAQPHAQPPRTDVQCLNRWKKTLRPGLHKGAWTEAEDRVVRESVEECGIAK-VKWSTIAARLPGRIGKQCRERWFNHLDPALKRSTWTPEEDTVIFEAQARLGNRWCEIAKLLPGRTENAVKNRFNSSAQKKWVSKNGAATGEGITQQLLDAVQRVYEAEQAE 226
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: A0A836C844_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA) HSP 1 Score: 256 bits (654), Expect = 6.900e-76 Identity = 113/156 (72.44%), Postives = 130/156 (83.33%), Query Frame = 1
Query: 712 GKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 1179
G W +ED RLR+ V+ HG R+WR +AE +G R+D+QCLHRWNKVLRPGLHKGPWTE ED +VRE VE G K VKWS VA++LPGRIGKQCRERWFNHLDP+IK+ W+PEED +VF AQ +GNRWCEIAKLLPGRTENAVKNRFNSSA+KK
Sbjct: 2 GTWAPDEDARLRDAVDRHGPRSWRAIAEDVGGARTDMQCLHRWNKVLRPGLHKGPWTETEDRVVRESVEAVGIAK-VKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAKLLPGRTENAVKNRFNSSAQKK 156
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: A0A7S1GEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA) HSP 1 Score: 251 bits (641), Expect = 2.480e-73 Identity = 114/182 (62.64%), Postives = 139/182 (76.37%), Query Frame = 1
Query: 709 GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQ--LTPDLLNKLKEA 1248
GG WT ED LR VE HG RNW+ +AE LG R+DVQCLHRWNKVL+PGL KGPW +EED++VR+ V G QV+WSV+AS+LPGRIGKQCRERWFNHLDP+IKKG W EED ++F AQ +GN+WCEIA++LPGRTENAVKNR+NSSAR++W + Q P L+ ++KEA
Sbjct: 11 GGNWTAAEDAELRVAVEAHGGRNWKRIAETLGHGRTDVQCLHRWNKVLKPGLVKGPWLKEEDDVVRDMVMKYGVG-QVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIARMLPGRTENAVKNRWNSSARRRWFKETGSKMEQDARVPMLVEEIKEA 191
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: F0Y9B4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9B4_AURAN) HSP 1 Score: 248 bits (632), Expect = 7.790e-73 Identity = 113/155 (72.90%), Postives = 129/155 (83.23%), Query Frame = 1
Query: 715 KWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 1179
KWT+EED RLREIVE GA+NW+ +A LG RSDVQCLHRWNKVLRPGL KGPWT +ED IV++ V GA +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+PEED I+F Q GNRW EIAKLLPGRTENAVKNR+NSSARK+
Sbjct: 1 KWTEEEDNRLREIVETFGAKNWKRLAMLLGNVRSDVQCLHRWNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGN-IKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: A0A8J2X3E5_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3E5_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.550e-71 Identity = 117/161 (72.67%), Postives = 134/161 (83.23%), Query Frame = 1
Query: 703 PKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 1185
P GGKWT+EED RLREIVE GA+NW+ +A LGT RSDVQCLHRWNKVLRPGL KGPWT ED +VR+ V GA +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+P+ED ++F Q GNRW EIAKLLPGRTENAVKNR+NSSARK+WL
Sbjct: 93 PVGGKWTEEEDRRLREIVETFGAKNWKRLAMLLGTVRSDVQCLHRWNKVLRPGLSKGPWTAAEDRVVRDMVLRHGAGN-IKWSVIAAQLPGRIGKQCRERWFNHLDPDIKKGDWTPDEDAVLFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKRWL 252
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: A0A6U4HUA2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HUA2_9STRA) HSP 1 Score: 256 bits (654), Expect = 8.450e-70 Identity = 145/283 (51.24%), Postives = 166/283 (58.66%), Query Frame = 1
Query: 709 GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL-DQNPGGASQ--------------LTPDLLNKLKEAYEQMQTQPSASGSQGLSDESGTDNDSKEPSMRGPASQHHRRRDSTPVAFGDLSLLHPGGERLTSPPQPMHARRHSAAGALTGLLNESP 1512
GGKW+KEED RL+ IV+ HGA+NW+ +AE LG RSDVQCLHRWNKVL+PGLHKGPW ED +VR+ V G K VKWS +A+ LPGRIGKQCRERWFNHLDPSI K W+ EED I+F AQ GNRWCEIAKLLPGRTEN VKNR+NSSARKKW D+ G + L PDL +K A Q T + G Q S E+ D E P S A L L PG SP Q RH + +L L P
Sbjct: 241 GGKWSKEEDARLKGIVQEHGAKNWKKIAELLGHTRSDVQCLHRWNKVLKPGLHKGPWQAAEDEVVRDMVIRHGVGK-VKWSDIAALLPGRIGKQCRERWFNHLDPSISKAPWTEEEDTIIFEAQQIFGNRWCEIAKLLPGRTENMVKNRWNSSARKKWFADRKAEGGNLAKMLATRSDANLTGLPPDLAAAVK-AARQTATNGGSQGDQKKSGETRIKPDVVEDG-NSPTETSRSLPGSETAAAAALPLQQPGMHAGRSPLQ-----RHESLSSLPKYLVPPP 515
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Match: A0A7S3HPT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPT5_9STRA) HSP 1 Score: 244 bits (624), Expect = 8.290e-68 Identity = 108/161 (67.08%), Postives = 131/161 (81.37%), Query Frame = 1
Query: 709 GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVELSGAQKQVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQ 1191
GGKW+ EEDT L+EIV+ HGA++W+ VA LG R+DVQCLHRWNKVLRPGL KG W++EED IVR V G K V+WS +A +LPGRIGKQCRERWFNHLDP+IKKG+W+ +E+ I++ AQ + GNRWCEI+KLLPGRTENAVKNR+NS KKWL +
Sbjct: 72 GGKWSTEEDTLLKEIVQVHGAKSWKKVAGLLGKTRTDVQCLHRWNKVLRPGLQKGAWSKEEDQIVRNMVAQVGVVK-VRWSTIAEQLPGRIGKQCRERWFNHLDPTIKKGDWTRDEEIIIYEAQRHFGNRWCEISKLLPGRTENAVKNRWNSCTMKKWLKE 231 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig123.1444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig123.1444.1 >prot_S-dermatodea_contig123.1444.1 ID=prot_S-dermatodea_contig123.1444.1|Name=mRNA_S-dermatodea_contig123.1444.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=1048bp MEGRESLLPQSSASLPSPRNPPEKRTSEGTTASAQKTPGTLRPPSLRVQNback to top mRNA from alignment at S-dermatodea_contig123:13488..29361- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig123.1444.1 ID=mRNA_S-dermatodea_contig123.1444.1|Name=mRNA_S-dermatodea_contig123.1444.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=15874bp|location=Sequence derived from alignment at S-dermatodea_contig123:13488..29361- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig123:13488..29361- >mRNA_S-dermatodea_contig123.1444.1 ID=mRNA_S-dermatodea_contig123.1444.1|Name=mRNA_S-dermatodea_contig123.1444.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=6288bp|location=Sequence derived from alignment at S-dermatodea_contig123:13488..29361- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |