mRNA_S-dermatodea_contig12263.1422.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12263.1422.1
Unique NamemRNA_S-dermatodea_contig12263.1422.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: D7FP20_ECTSI (Glutamate--cysteine ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP20_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 5.080e-115
Identity = 182/221 (82.35%), Postives = 195/221 (88.24%), Query Frame = 1 
Query:    1 HRGRLADTDVRWDTISASVDDRTEEERQPRGKIMQ-EFEVVEFLGEGAAEEAQPR-QHHPKSRYDSISTFIYNCRTGTDRCRVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSKVGIRMR 657
            HRGRLADTDVRWDTISASVDDRTEEE +P  + +  E +V   + +   +E  PR Q  PKSRYDSISTFIYNCRTGTDRCRVVNKYNDIDCPVDEPSR+AL  +GIDSALSKHIAHLFSRDPLVIFEGRIEEVDD+ EVDHFENLQSTNWQTVRWKPPPPR+SPNDPH+GWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLN Y+PLSKV   MR
Sbjct:  308 HRGRLADTDVRWDTISASVDDRTEEEMRPAEEPLSGELDVGGLMKD---DENAPRPQRQPKSRYDSISTFIYNCRTGTDRCRVVNKYNDIDCPVDEPSRKALRKEGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDDTEVDHFENLQSTNWQTVRWKPPPPRLSPNDPHVGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNLYIPLSKVDENMR 525
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: A0A835ZCQ8_9STRA (Glutamate--cysteine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCQ8_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.160e-83
Identity = 146/226 (64.60%), Postives = 167/226 (73.89%), Query Frame = 1 
Query:    4 RGRLADTDVRWDTISASVDDRTEEERQPRGKIMQEFEVVEFLGEGAAEEA-QPRQHHPKSRYDSISTFIYNC-RTGTD------RCRVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSKVGIRMR 657
            RGRLADTDVRWD ISASVDDRT  ER            +   G+G    A +  +  PKSRY SISTFI+ C R G        R +V+ +YNDI+CPVD  S  AL+  G+D  L++H+AHLF+RDPLV+FEGRI E+DD  EV+HFEN+QSTNWQTVRWKPPPPR SPNDPHIGWRTEFRSLE+QLTDFENAA+ VFIVLVTRVILA DLN YMPLSKV   MR
Sbjct:  310 RGRLADTDVRWDVISASVDDRTPAERG-----------IATGGDGDERMAGRGVRQQPKSRYASISTFIHQCQRKGAAAAESGCRAQVLKQYNDIECPVDAASFDALVAAGVDEPLARHVAHLFTRDPLVVFEGRIAELDDAAEVEHFENIQSTNWQTVRWKPPPPRTSPNDPHIGWRTEFRSLEVQLTDFENAAFVVFIVLVTRVILAFDLNLYMPLSKVDANMR 524
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: A0A7S2WRG5_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WRG5_9STRA)

HSP 1 Score: 246 bits (629), Expect = 3.890e-77
Identity = 133/223 (59.64%), Postives = 160/223 (71.75%), Query Frame = 1 
Query:    4 RGRLADTDVRWDTISASVDDRTEEERQPRGKIMQEFEVVEFLGEGAAEEAQPRQHHPKSRYDSISTFIYNCRTGTDRC-----RVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSKVGIRMR 657
            +GRLAD D RW  IS SVD RT  E+   G    +    + +G G       ++   KSRYDSIST+I+    G D       RV+N YNDI  P+DE S Q L D G+D ALS+HIAHLF RDPLVIFEG +EEVDD+ + +HFE++QSTNWQTVRWKPPPPR SPNDPHIGWRTEFRS+EIQLTDFENAA+T+F VL+TRVIL+ DLN Y+PLS+V   M+
Sbjct:   85 KGRLADIDCRWGVISESVDCRTPTEQ---GSKENKDGQTKLVGNG-------QRRIQKSRYDSISTYIFQ---GPDVLPGMGNRVLNMYNDIPVPIDEESYQLLRDAGVDPALSQHIAHLFIRDPLVIFEGAVEEVDDDTQTEHFESIQSTNWQTVRWKPPPPRNSPNDPHIGWRTEFRSMEIQLTDFENAAFTIFTVLLTRVILSFDLNLYIPLSRVDANMQ 294
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: A0A7S2SFD3_9STRA (Glutamate--cysteine ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFD3_9STRA)

HSP 1 Score: 254 bits (648), Expect = 1.660e-76
Identity = 134/216 (62.04%), Postives = 155/216 (71.76%), Query Frame = 1 
Query:    4 RGRLADTDVRWDTISASVDDRTEEER---QPRGKIMQEFEVVEFLGEGAAEEAQPRQHHPKSRYDSISTFIYNCRTGTDRCRVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSKV 642
            +GRLADTDVRWDTI+ASVDDRT  ER    P     +     E  G G       R+   KSRY S+S +IY+C         V++YND+D  +DE S   L+D  +D  L+ HI+HLF RDPLVIFEGRIEE+DDE + DHFENLQSTNWQTVRWKPPPPR  PN PHIGWRTEFR +E+QLTDFENAA+ VFIVLVTRVILA DLN Y+PLSKV
Sbjct:  300 KGRLADTDVRWDTIAASVDDRTPMERGEDAPTAADDERLGRAEMAGGG-------RRRLRKSRYGSVSGYIYHCSANPG---YVDRYNDLDRAIDEWSFDTLIDHDVDPVLAAHISHLFVRDPLVIFEGRIEELDDEQDTDHFENLQSTNWQTVRWKPPPPRTDPNAPHIGWRTEFRPMEVQLTDFENAAFAVFIVLVTRVILAFDLNLYIPLSKV 505
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: A0A7S4D5D2_HETAK (Glutamate--cysteine ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5D2_HETAK)

HSP 1 Score: 239 bits (610), Expect = 1.670e-75
Identity = 125/218 (57.34%), Postives = 150/218 (68.81%), Query Frame = 1 
Query:    4 RGRLADTDVRWDTISASVDDRTEEERQPRGKIMQEFEVVEFLGEGAAEEAQPRQHHPKSRYDSISTFIYNCRTGTDRCRVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSKVGIRMR 657
            +GRL DTDVRW  I+ASVDDRT  E                  + A      R+ H KSRYDS+S +I+ C       R + KY D+  P D      L+ +G+D+AL++HIAHLF+RDPLVIF+G + EVDDE   +HFEN+QSTNWQTVRWKPPPPR  PN PHIGWR EFRS+E+QLTDFENAA+TVF+VLVTRVILA DLN Y+PLSKV   MR
Sbjct:   67 KGRLVDTDVRWAAIAASVDDRTPAEAGEXXXXXXXXXXXXXRPDMAG--GGVRRLH-KSRYDSVSNYIFQCPRHPPGARSLEKYCDVPAPADPEHVARLMARGLDAALAQHIAHLFTRDPLVIFQGAVAEVDDERSTEHFENVQSTNWQTVRWKPPPPREGPNAPHIGWRVEFRSMEVQLTDFENAAFTVFVVLVTRVILAFDLNLYLPLSKVDENMR 281
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: B8LE49_THAPS (Glutamate--cysteine ligase (Fragment) n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LE49_THAPS)

HSP 1 Score: 246 bits (627), Expect = 4.240e-74
Identity = 129/221 (58.37%), Postives = 157/221 (71.04%), Query Frame = 1 
Query:    4 RGRLADTDVRWDTISASVDDRTEEERQPRGKIMQEFEVVEFLGEGAAEEAQPRQHHPKSRYDSISTFIYNCRTGTD---RCRVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSKVGIRMR 657
            +GRLADTD RW  IS  VDDRT  ER   G      ++ E  G+G       R+   KSRYDSIST++Y   +  D   + R++N YNDI  P+DE   + L + GID  LS+HIAH+F RDPLVIF+G +EEVDDE + +HFE++QSTNWQTVRWKPPPPR  PNDPHIGWRTEFRS+EIQLTDFENAA+T F  L+TRVIL  DLN Y+PLS+V   M+
Sbjct:  282 KGRLADTDCRWGIISEGVDDRTPAERGREGGPDPPGDI-EMAGKG-------RRRLYKSRYDSISTYLYQGASTEDSHMKNRILNMYNDIPVPIDEDKYRDLREAGIDPLLSQHIAHIFVRDPLVIFDGAVEEVDDETQTEHFESIQSTNWQTVRWKPPPPRSGPNDPHIGWRTEFRSMEIQLTDFENAAFTTFTTLLTRVILTFDLNLYIPLSRVDANMQ 494
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: A0A836CE91_9STRA (Glutamate--cysteine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE91_9STRA)

HSP 1 Score: 246 bits (627), Expect = 6.640e-74
Identity = 132/220 (60.00%), Postives = 156/220 (70.91%), Query Frame = 1 
Query:    4 RGRLADTDVRWDTISASVDDRTEEERQPRGKIMQEFEVVEFLGEG-AAEEAQPR------QHHPKSRYDSISTFIYNCRTGTDR-CRVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSK 639
            +GRL DTDVRW+ ISASVDDRT  E                LGE  AA    P       +   KSRYDSIST+++ CR  +D    V+ +YNDI CPVD  +   L   G+D AL+ H+AHLF+RDPLVIFE  + EV+DE E DHFEN+QSTNWQTVRWKPPPPR SP+DP+IGWRTEFRS+E+QLTD ENAA+TVF+VLVTRVILA DL+ YMPLSK
Sbjct:  262 KGRLVDTDVRWNVISASVDDRTPAE----------------LGEATAAVTPDPTLVGGGIRRLLKSRYDSISTYLHYCRRRSDNPMYVLERYNDIPCPVDPAAFNTLTQNGVDPALATHVAHLFTRDPLVIFERGVSEVNDEEETDHFENIQSTNWQTVRWKPPPPRTSPSDPNIGWRTEFRSMEVQLTDLENAAFTVFVVLVTRVILAFDLSLYMPLSK 465
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: A0A7S1ZWD3_TRICV (Glutamate--cysteine ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWD3_TRICV)

HSP 1 Score: 249 bits (635), Expect = 1.870e-73
Identity = 133/225 (59.11%), Postives = 162/225 (72.00%), Query Frame = 1 
Query:    4 RGRLADTDVRWDTISASVDDRTEEERQPRGKIMQEFEVVEFLGEGAAEEAQPRQHHPKSRYDSISTFIY-------NCRTGTDRCRVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSKVGIRMR 657
            +GRLADTD RW  IS SVDDRT  ER  +  +  + E+    G+G       +++  KSRYD IS +IY       + +TG    RV+N YNDI  P+DE S Q L   GID ALS+HIAHLF RDPLV+FEG +EEVDDE + +HFE++QSTNWQ+VRWKPPPPR  PNDPH+GWRTEFRS+EIQLTDFENAA+TVF VL+TRVIL  DLN Y+PLS+V   M+
Sbjct:  517 KGRLADTDCRWGIISESVDDRTVAERGKQDGVEPQTELA---GKG-------QRYINKSRYDCISAYIYQGVDEITDSKTGMAN-RVLNMYNDIHIPIDEESYQLLRKAGIDPALSQHIAHLFIRDPLVVFEGAVEEVDDETQTEHFESIQSTNWQSVRWKPPPPRNDPNDPHVGWRTEFRSMEIQLTDFENAAFTVFTVLLTRVILTFDLNLYIPLSRVDANMQ 730
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: A0A1Z5KPV7_FISSO (Glutamate--cysteine ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPV7_FISSO)

HSP 1 Score: 248 bits (634), Expect = 2.390e-73
Identity = 132/218 (60.55%), Postives = 158/218 (72.48%), Query Frame = 1 
Query:    4 RGRLADTDVRWDTISASVDDRTEEERQPRGKIMQEFEVVEFLGEGAAEEAQPRQHHPKSRYDSISTFIYNCRTGTDRCRVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSKVGIRMR 657
            RGRLADTD RW  IS SVDDRT  ER  R      +E +   G       Q R +  KSRYDSIST+IY      D  RV N YNDI  PVD    Q LL+ G+D+AL++H++HLF RDPLV+F+G + EVDDE + +H+E++QSTNWQTVRWKPPPPR SPNDPHIGWRTEFRS+E+QLTDFENAA+T FIVL+TRVIL  DLN Y+PLS+V   M+
Sbjct:  495 RGRLADTDARWGVISESVDDRTPAERG-RPDPNAPYEALNANG-------QRRIY--KSRYDSISTYIYQGGPCKDDRRVRNSYNDIPVPVDGDCYQLLLENGVDAALAQHVSHLFIRDPLVVFDGAVTEVDDETQTEHWESIQSTNWQTVRWKPPPPRNSPNDPHIGWRTEFRSMELQLTDFENAAFTAFIVLLTRVILTFDLNLYIPLSRVDANMQ 702
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BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Match: A0A7S2K593_9STRA (Glutamate--cysteine ligase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K593_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.440e-71
Identity = 125/221 (56.56%), Postives = 159/221 (71.95%), Query Frame = 1 
Query:    4 RGRLADTDVRWDTISASVDDRTEEER---QPRGKIMQEFEVVEFLGEGAAEEAQPRQHHPKSRYDSISTFIYNCRTGTDRCRVVNKYNDIDCPVDEPSRQALLDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQTVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVILALDLNFYMPLSKVGIRMR 657
            +GR+ DTD RW  IS +VDDRT  ER   +  G +  + E+           A  ++   KSRYDSIST+IY    G    +V+NKYNDI  P++E   + L D  ID ALS+H++HLF+RDPLVIF+G +EEVDDE   +HFE++QSTNWQ+VRWKPPPPR +PNDPHIGWRTEFRS+E+QLTDFENAA+T F+VL+TRVIL  DLN Y+PLS+V   M+
Sbjct:  416 KGRIVDTDCRWGIISEAVDDRTPAERGLAEQDGSMPTQSELA----------ANGKRRLYKSRYDSISTYIYQGTCGNAN-QVLNKYNDIPVPLEEEFYKTLRDNDIDPALSQHVSHLFARDPLVIFDGAVEEVDDETNTEHFESIQSTNWQSVRWKPPPPRHTPNDPHIGWRTEFRSMEMQLTDFENAAFTSFVVLLTRVILTFDLNLYLPLSRVDANMQ 625
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12263.1422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP20_ECTSI5.080e-11582.35Glutamate--cysteine ligase n=2 Tax=Ectocarpus TaxI... [more]
A0A835ZCQ8_9STRA2.160e-8364.60Glutamate--cysteine ligase n=1 Tax=Tribonema minus... [more]
A0A7S2WRG5_9STRA3.890e-7759.64Glutamate--cysteine ligase (Fragment) n=1 Tax=Euca... [more]
A0A7S2SFD3_9STRA1.660e-7662.04Glutamate--cysteine ligase n=1 Tax=Rhizochromulina... [more]
A0A7S4D5D2_HETAK1.670e-7557.34Glutamate--cysteine ligase (Fragment) n=1 Tax=Hete... [more]
B8LE49_THAPS4.240e-7458.37Glutamate--cysteine ligase (Fragment) n=2 Tax=Thal... [more]
A0A836CE91_9STRA6.640e-7460.00Glutamate--cysteine ligase n=1 Tax=Tribonema minus... [more]
A0A7S1ZWD3_TRICV1.870e-7359.11Glutamate--cysteine ligase n=1 Tax=Trieres chinens... [more]
A0A1Z5KPV7_FISSO2.390e-7360.55Glutamate--cysteine ligase n=2 Tax=Fistulifera sol... [more]
A0A7S2K593_9STRA1.440e-7156.56Glutamate--cysteine ligase n=1 Tax=Leptocylindrus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12263contigS-dermatodea_contig12263:1545..6553 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score249.2
Seed ortholog evalue1.8e-63
Seed eggNOG ortholog35128.Thapsdraft1155
Preferred nameGCLC
KEGG rclassRC00064,RC00090
KEGG koko:K11204
KEGG ReactionR00894,R10993
KEGG Pathwayko00270,ko00480,ko01100,ko04212,ko04216,map00270,map00480,map01100,map04212,map04216
KEGG ModuleM00118
GOsGO:0000096,GO:0000166,GO:0000287,GO:0000302,GO:0000303,GO:0000305,GO:0000902,GO:0000904,GO:0001101,GO:0001678,GO:0002009,GO:0002165,GO:0003008,GO:0003013,GO:0003018,GO:0003254,GO:0003674,GO:0003824,GO:0004357,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006082,GO:0006355,GO:0006518,GO:0006520,GO:0006534,GO:0006536,GO:0006575,GO:0006732,GO:0006749,GO:0006750,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006915,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007275,GO:0007346,GO:0007399,GO:0007409,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007568,GO:0007584,GO:0008015,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009058,GO:0009064,GO:0009069,GO:0009266,GO:0009408,GO:0009410,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010941,GO:0012501,GO:0014070,GO:0014823,GO:0015711,GO:0015833,GO:0016043,GO:0016595,GO:0016597,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0017109,GO:0019184,GO:0019219,GO:0019222,GO:0019725,GO:0019748,GO:0019752,GO:0019852,GO:0022008,GO:0023051,GO:0023057,GO:0030030,GO:0030154,GO:0030162,GO:0030182,GO:0030435,GO:0030554,GO:0030587,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031406,GO:0031667,GO:0032268,GO:0032269,GO:0032270,GO:0032354,GO:0032434,GO:0032436,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032868,GO:0032869,GO:0032870,GO:0032989,GO:0032990,GO:0032991,GO:0033500,GO:0034097,GO:0034284,GO:0034635,GO:0034641,GO:0034698,GO:0035107,GO:0035114,GO:0035120,GO:0035150,GO:0035220,GO:0035239,GO:0035295,GO:0035690,GO:0035728,GO:0035729,GO:0036094,GO:0042176,GO:0042221,GO:0042391,GO:0042398,GO:0042493,GO:0042542,GO:0042592,GO:0042593,GO:0042886,GO:0042939,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043436,GO:0043523,GO:0043524,GO:0043531,GO:0043603,GO:0043604,GO:0043648,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044344,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0044752,GO:0045454,GO:0045732,GO:0045862,GO:0045892,GO:0045934,GO:0046677,GO:0046685,GO:0046686,GO:0046688,GO:0046872,GO:0046937,GO:0046938,GO:0046982,GO:0046983,GO:0048037,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050662,GO:0050789,GO:0050794,GO:0050801,GO:0050865,GO:0050866,GO:0050880,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051409,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051881,GO:0051900,GO:0055082,GO:0060255,GO:0060429,GO:0060548,GO:0060562,GO:0061136,GO:0061564,GO:0061687,GO:0065007,GO:0065008,GO:0070555,GO:0070848,GO:0070887,GO:0071214,GO:0071229,GO:0071230,GO:0071241,GO:0071248,GO:0071260,GO:0071276,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071363,GO:0071371,GO:0071372,GO:0071375,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071585,GO:0071702,GO:0071704,GO:0071705,GO:0071774,GO:0071840,GO:0072337,GO:0072348,GO:0080090,GO:0090066,GO:0090702,GO:0097066,GO:0097067,GO:0097068,GO:0097069,GO:0097159,GO:0097237,GO:0097367,GO:0097501,GO:0098754,GO:0098849,GO:0099120,GO:0104004,GO:0120036,GO:0120039,GO:1901214,GO:1901215,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901800,GO:1902494,GO:1902679,GO:1903050,GO:1903052,GO:1903320,GO:1903321,GO:1903362,GO:1903364,GO:1903506,GO:1903507,GO:1904386,GO:1904387,GO:1990170,GO:1990748,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000489,GO:2000490,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237
EggNOG free text desc.Glutamate-cysteine ligase
EggNOG OGs2XBFY@2836,KOG3754@1,KOG3754@2759
EC6.3.2.2
COG Functional cat.H
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlutamate cysteine ligase
Ec32 orthologEc-05_001730.1
Exons5
Model size657
Cds size657
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12263.1422.1prot_S-dermatodea_contig12263.1422.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12263 1545..6553 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924240.4955564-CDS-S-dermatodea_contig12263:1544..16581622924240.4955564-CDS-S-dermatodea_contig12263:1544..1658Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 1545..1658 -
1694079117.7736182-CDS-S-dermatodea_contig12263:1544..16581694079117.7736182-CDS-S-dermatodea_contig12263:1544..1658Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 1545..1658 -
1622924240.5082505-CDS-S-dermatodea_contig12263:2890..30221622924240.5082505-CDS-S-dermatodea_contig12263:2890..3022Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 2891..3022 -
1694079117.7875538-CDS-S-dermatodea_contig12263:2890..30221694079117.7875538-CDS-S-dermatodea_contig12263:2890..3022Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 2891..3022 -
1622924240.5187464-CDS-S-dermatodea_contig12263:3777..38671622924240.5187464-CDS-S-dermatodea_contig12263:3777..3867Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 3778..3867 -
1694079117.806841-CDS-S-dermatodea_contig12263:3777..38671694079117.806841-CDS-S-dermatodea_contig12263:3777..3867Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 3778..3867 -
1622924240.5332606-CDS-S-dermatodea_contig12263:5058..51971622924240.5332606-CDS-S-dermatodea_contig12263:5058..5197Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 5059..5197 -
1694079117.817265-CDS-S-dermatodea_contig12263:5058..51971694079117.817265-CDS-S-dermatodea_contig12263:5058..5197Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 5059..5197 -
1622924240.5434186-CDS-S-dermatodea_contig12263:6371..65531622924240.5434186-CDS-S-dermatodea_contig12263:6371..6553Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 6372..6553 -
1694079117.8263726-CDS-S-dermatodea_contig12263:6371..65531694079117.8263726-CDS-S-dermatodea_contig12263:6371..6553Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12263 6372..6553 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12263.1422.1

>prot_S-dermatodea_contig12263.1422.1 ID=prot_S-dermatodea_contig12263.1422.1|Name=mRNA_S-dermatodea_contig12263.1422.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=219bp
HRGRLADTDVRWDTISASVDDRTEEERQPRGKIMQEFEVVEFLGEGAAEE
AQPRQHHPKSRYDSISTFIYNCRTGTDRCRVVNKYNDIDCPVDEPSRQAL
LDQGIDSALSKHIAHLFSRDPLVIFEGRIEEVDDENEVDHFENLQSTNWQ
TVRWKPPPPRVSPNDPHIGWRTEFRSLEIQLTDFENAAYTVFIVLVTRVI
LALDLNFYMPLSKVGIRMR
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mRNA from alignment at S-dermatodea_contig12263:1545..6553-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12263.1422.1 ID=mRNA_S-dermatodea_contig12263.1422.1|Name=mRNA_S-dermatodea_contig12263.1422.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5009bp|location=Sequence derived from alignment at S-dermatodea_contig12263:1545..6553- (Saccorhiza dermatodea SderLu1190fm monoicous)
CACAGGGGTCGGCTTGCCGACACGGACGTGCGATGGGACACCATCTCTGC
GTCCGTCGACGACCGCACCGAAGAGGAGAGACAGCCGCGAGGCAAGATAA
TGCAAGAGTTCGAGGTGGTGGAGTTCCTGGGGGAAGGGGCCGCAGAAGAA
GCCCAGCCGCGGCAGCACCACCCGAAGAGCCGGTAAGCTTCGCGGGAATG
CTGCCGGCGCGTGTTGTCTGCGGGCGGTACCACCACAGGATGTGATACAT
GGGAAGGGGTGCCGATTGATGCCGATTCTGTCGAGATATTTGCAAAGGCT
GGTTGCGCGCCCTTGGGTTATGGTGTGTTCGTCCCAGCGCGGGCTTCGCG
GGGTGTGTGGGAGGCGTTCGAAGGACCGGTGTGATGGGCGACGAGGCGAT
TGGGCTCGTGTTTGCGTTTGCGCTTGCGTTTGTGCGCGCTTCCCACCCGT
TGATGGGTTGGGTTTCGTGGCGGACGGGGGTGGCGAGGTTGTGGCGAGGA
AGGAGTTGGCAAGGTTTGCACGTGAGGGTGTATACCCAGCGGAAAGCTGT
GCTGCTGTCTCCCATGTGTTACGCTTCACGCTGTTGCAGCGGGTGGGCTC
AGGCGTAGCACATGCGACCGATGGCCTGGTACAACTGTAGTCGCCTGTTG
TGTGTGGGTGTGGGGCCGCATGTTTGCGAAGCCGAGTCTCTCTTATGCTG
TTACGTGTATTTTCAGCGTGTACTTGTAGTCTGACGAACCGAACGCATAG
GTACAGCGCCGAACTACCGGGTCACCTAGGTCCCACGAAAGGTGTTGGTT
CCAGTCGTTAGTACGGTAATGCTGGAGGCGTGAAGGAGACACGGTAGTAG
AGAGCGCCTCGATTTGGCGATTTAAAAGTGCAATAGCGCTATCATAGGCA
GGTGGATCTACGCGCAGCACACGGGAGTCGGAGACCTCGTATACGGTGCG
GTGCAGCAGTGGTGGTTTTAGCTCTGTCGAGGCGCCATGCGGGAACGTTC
CAGCATGAGCCTTGCTCCTGCTGTCCTCGCCGCTGCTTTCACGCTGCGGC
GGGAGCGTCTGTCTTTGCTGACGAACTGTGCAGTTGTAACTGTAACCTGC
GCAGCTGAATATGCTTCCTGTGTGGGTGGGCATCGTCGTCCTCGCAGGTG
CTCTGCCCACCTCTCAGGCAGCAGAGGTGGCGATCGATCACCTCCTGTGC
CCTTCCCTTTGCCGCGAAGTGCGTGCTGTACGGTCCGGTCTTGGCCGTGA
GCGAGACTGCTGGAGGGTATGCATAGGGACCCACCCGTGCCACACACAAT
ACTTCGAGCGTCTTATCTTTTCAGGGATCGTAACGCTTGTCCGAAACGGC
CGGCAGGTATGATTCGATCAGCACGTTCATCTACAACTGCCGCACGGGCA
CCGACCGCTGCCGAGTGGTGAACAAATACAACGACATCGACTGCCCCGTT
GACGAGCCGTCGCGTCAGGCGTTGCTGGACCAGGGGATAGACTCGGTAGG
TCCCCCCCTTTTGTTTTGGAGCGGTACCGTGTGTGTGTGATTGCAATTGT
TTCTGAGCCTGGCGACGTGTTATCCGGCCTTGACGTGTTATCCGGCCTTG
TCCAGGTCCAGCTGGGCTGGGAGTCGACGCTGCTACTTGTTTAGGTTGTA
TGCGTGATGTGTAGATATTGCGGGGGACCGTAGTTAACAGGTCCAATTTT
TTCCACAAGTCTCACCCTAGAAAAATCAAAATAGGTTGGAATTTTATCGA
GAGATTTCGAGGTCGATGTTCCTGTGTATGGCCATACCTCGTGTCTTTTT
ATTACTTTCTCATGAGATTTTTGGTGTTTGGGTATTCGTGGTGGAGATAT
TTTGGTCCTGATTACTTGATTATAGTGTACATTACTTGATTATAGTGTAC
CTCCGTAATAGTGTAAAATCAAGAGTATACAGTATATGCGGAATCAAACC
GCTTGGTATCCGTGGGTGGGTGACATGCGACCGCAACTATTGTGTAGAGG
ACACCAGCGTCTTGTCGGGCCGCTCGGGACCTCTATTGGCCGTGACCATA
TTTTTGCTATTTGCTGGTGTAGTTACAAGCCTTGCTTTTGTCCTATCACC
GCTTTTCGCCAGATTCAGTACACAAAAATACACAAAAAGTAGCGCGAATC
GTTTTGATTTTCAAGTCTGGTGTTTTTGCTTGTGGTTTGGCTAGGCTATC
ATAGTGTTTCCGTTTTTGGTTATGGCGAGCGGTCCGGTCCGTTTGGTCTT
GCTTTTCATTTTATTTTTTATCTTGTCGCCGATCACGGCATGCGGAATCT
TGAGATGTGTGTCGATCAGGTATTTAGTGTGAATGAAGCCATCATCAGCA
TTGTCATCATCACCACCTAGTCGGTGGGTTTGACACGAAATACCGTCTGC
CTCGCAAGTGCCACACGCCCGCAGCCCTCCTTGAAGGGGTTTGTAAGACG
TCCGTCCATCCTTCCCGTAGACGTAATTCACCCCTTTTCATCGCAATCAC
GATACTCCTAGTCTTTGTTGGTCGAAACGCATCTATTAATAGTGCACACC
GCAGTGTATCAACATATGTATGTTAAATTTGTTTTACACTCCCTGTGGTT
CTGATTCCCAATGTGACGCATCCGCAACCACGTTCAAAATTCCTCTTGCT
GCCGCCTTCGATGCGGGATCCGGTTCGTTTCTTCAGGCCCTTTCGAAGCA
CATCGCGCACCTCTTCTCCAGGGATCCCCTCGTGATATTCGAGGGCAGAA
TAGAAGAAGTTGACGACGAGAACGAGGTGGGTTCGTTTTTTTTGTTTTTT
GTTGCCCGATTTGTGCGATTTTTTTACTTGTCGAGATATCTTGATGGCGT
CGCCTTGGGGTACTTCCACGTTAACTTTAGCTTTTGATTTCTTTTTGAGT
TTTTATTTTTTCAATTTTGTTCGTTGTTGGGCACTACTAAACTGTATAAT
AGCAAATCCCGTTTGCACCGCCAGCGGAAACTTGTCCGTTAGTTTTTTTT
TTTCCCGTCTGTATTTCTTCATCGAGGTTTTTTATTTTTTTATTTTGCGG
GCACTTTTTATTTCTTGTGTAGTAGCTGTTGTTGTGATTACGCTGACGAA
AAAGCTGCGGTGTTTGAAGGTTTTCTTCGTGAAAGGGATTGGAGGAATGT
TTAGACACACGACGGCGACAACAGGATCTCGCCTCTGTTTCGTACCAATC
CAAGTCCTGTCGTGTCTCTAGCATAGAGCGACCGGCATTGAAAACACGCG
CGATTTTTGCTTGGAAGGCCAAGTTGTTCTAGGGCTCGCCATGTCGTAGT
GACCTACCTCGCTAGAGCTATAATAGCGCGCCTGTAGAGCTTACAACACC
TGGCGCTCCTTGAGCGGTCTTGCTGAAATCGATACCACGGAGAACGGTGT
TCCACGCGCCGATGTGTCCCATTGTGGAATCCCGGAATGTTCTGCAACGC
CTTGTTTTGTGTGTTCCGCATCTTCCATATGCCGTCACTTTTACAAGCCG
CGTCTTTCCCCGTTTTGTTTCGTTACCGTAGGTGGACCACTTCGAAAACC
TGCAGTCGACGAACTGGCAGACCGTTCGCTGGAAGCCCCCGCCGCCCAGG
GTCAGCCCCAACGACCCGCACATCGGCTGGAGGACGGAGTTCCGAAGCTT
GGAGATACAGCTGGTGAGGCTAGGCCGTGTGTCTACAACTCGTGTTACAT
ACACGCTTCGTTGGAGCCGTGAACTCGCTTAGGTTATTTTGCTGTCGTTT
CCGTAACTCACGCGTGCGCGTTTCCCCGCAGGTTTTGCCAATCAAATGGT
GAGACCCCAGGTCATCACGCCCGGCTTCATTTGTGTGCAACGTATACGTC
TGAGCTCGATGGAAAATCTGAGAGTGCCTCGTGGAACGAGAACCCCGTCA
CAGAAGAGGAGCCTACAGTAGTGTGTTCATGTATGTACTTGATTGGATAT
ATGTCTGCCTTGCGTAGTAGGACACGAGCGCGAAGCTATTCTCTGCTTTG
GGATGCAGTGTTGGCGGCAATGCTTGCGACAAACATATCTTCCCCGTTGT
GCATTTTTTCGCATTTCCCTGCTTGCTTCGGGACGCAGCAACATATTGGG
TAGTTTTACGCCCGTGTTGAGTGCCCCCCCCTCCTGAAAAACTAAAGATT
TCAGAAACATAGAGCGAGCGTTGGGGTCCCACCTTTTCAAGAGGGAAGAT
GGTCCAAGCTACACTACACCTATGGAGGCTCAGTTGTTACATATATGATG
CTATGGTGTCTCATCATGTACTTCGAAGTATGATGTTATATGGTTCTGTT
ATCATACAGGACATGAGTCTTTGTCCTGAACTATGTCCTGGTGATGTATC
TTTGCAGCGTTTTTATGAGCCAATAATATTAAATGTTATTTTCCTATCAT
ACCACATATTTATATTTAGTGCCCCCCCCCGCCCCCCCCCGAGGTCTATG
GTCTAACGACTACGGTATGCACGATCAATGAGTACAATGAGTACACCCCC
GCTCCCCCCCCGCCCCCCCCCCATGCAAAGCATCCGTTCCGTAAAGTTTC
GGCGTGCGCGATTCGAATCACATTGGCTGTACATGTTGGGAACGGCACGG
TCTGAGCATCGCGCGCGGCGAAGCCCTTGCGAGGTTAGACCCGGTCAATT
CATCAATGCCACCGCAAATTTTATGGATTCAAAGATTCGCGAGCAACACT
GGGCCATGCCCCCCCCCGTTCGTCCCAGTTCTTCATGAATGGTTGGTTGA
TACGGTATCTCGCGGTTTTGTGTCATCCAGGGCGCGAAGCAAGCTGAATC
CTTGCAAGACTGGGCCCGCCTTTTGTCGCGGTGCTTTGACCGAGCCCGCC
TCCCACTCCCCCCCGTCTCCCGTGCCTCCTGCTTTCAAACGCCAGACGGA
CTTCGAGAACGCCGCGTACACGGTGTTCATAGTGCTCGTGACAAGAGTTA
TCCTTGCTCTGGACTTGAACTTCTACATGCCTCTTTCGAAGGTGGGCATT
CGGATGCGT
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Coding sequence (CDS) from alignment at S-dermatodea_contig12263:1545..6553-

>mRNA_S-dermatodea_contig12263.1422.1 ID=mRNA_S-dermatodea_contig12263.1422.1|Name=mRNA_S-dermatodea_contig12263.1422.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at S-dermatodea_contig12263:1545..6553- (Saccorhiza dermatodea SderLu1190fm monoicous)
CACAGGGGTCGGCTTGCCGACACGGACGTGCGATGGGACACCATCTCTGC
GTCCGTCGACGACCGCACCGAAGAGGAGAGACAGCCGCGAGGCAAGATAA
TGCAAGAGTTCGAGGTGGTGGAGTTCCTGGGGGAAGGGGCCGCAGAAGAA
GCCCAGCCGCGGCAGCACCACCCGAAGAGCCGCACAGGGGTCGGCTTGCC
GACACGGACGTGCGATGGGACACCATCTCTGCGTCCGTCGACGACCGCAC
CGAAGAGGAGAGACAGCCGCGAGGCAAGATAATGCAAGAGTTCGAGGTGG
TGGAGTTCCTGGGGGAAGGGGCCGCAGAAGAAGCCCAGCCGCGGCAGCAC
CACCCGAAGAGCCGGTATGATTCGATCAGCACGTTCATCTACAACTGCCG
CACGGGCACCGACCGCTGCCGAGTGGTGAACAAATACAACGACATCGACT
GCCCCGTTGACGAGCCGTCGCGTCAGGCGTTGCTGGACCAGGGGATAGAC
TCGGTATGATTCGATCAGCACGTTCATCTACAACTGCCGCACGGGCACCG
ACCGCTGCCGAGTGGTGAACAAATACAACGACATCGACTGCCCCGTTGAC
GAGCCGTCGCGTCAGGCGTTGCTGGACCAGGGGATAGACTCGGCCCTTTC
GAAGCACATCGCGCACCTCTTCTCCAGGGATCCCCTCGTGATATTCGAGG
GCAGAATAGAAGAAGTTGACGACGAGAACGAGGCCCTTTCGAAGCACATC
GCGCACCTCTTCTCCAGGGATCCCCTCGTGATATTCGAGGGCAGAATAGA
AGAAGTTGACGACGAGAACGAGGTGGACCACTTCGAAAACCTGCAGTCGA
CGAACTGGCAGACCGTTCGCTGGAAGCCCCCGCCGCCCAGGGTCAGCCCC
AACGACCCGCACATCGGCTGGAGGACGGAGTTCCGAAGCTTGGAGATACA
GCTGGTGGACCACTTCGAAAACCTGCAGTCGACGAACTGGCAGACCGTTC
GCTGGAAGCCCCCGCCGCCCAGGGTCAGCCCCAACGACCCGCACATCGGC
TGGAGGACGGAGTTCCGAAGCTTGGAGATACAGCTGACGGACTTCGAGAA
CGCCGCGTACACGGTGTTCATAGTGCTCGTGACAAGAGTTATCCTTGCTC
TGGACTTGAACTTCTACATGCCTCTTTCGAAGGTGGGCATTCGGATGCGT
ACGGACTTCGAGAACGCCGCGTACACGGTGTTCATAGTGCTCGTGACAAG
AGTTATCCTTGCTCTGGACTTGAACTTCTACATGCCTCTTTCGAAGGTGG
GCATTCGGATGCGT
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