prot_S-dermatodea_contig1222.1389.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1222.1389.1
Unique Nameprot_S-dermatodea_contig1222.1389.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length405
Homology
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BLAST of mRNA_S-dermatodea_contig1222.1389.1 vs. uniprot
Match: A0A6H5JHG4_9PHAE (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHG4_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 8.300e-43
Identity = 111/230 (48.26%), Postives = 142/230 (61.74%), Query Frame = 0 
Query:   18 SISCEVFLESGKAYTCSVVCLTGQKGS-LRSHTPPLSSTTETTAAGVSTTAAFCGFLLTVYGARPIQVVAGEKRPAAVGYFPVGPSLHQAVSHLWLEGHQSSSAIADDDGGQR-------LQAFALCRGAALAVVAAGDSAALFVLINTSSSEIGVALTLTSLEGATVSAASPLSETS-------NVVRCPPESQRVVLLLARTADHGTFRHAFFYRLLTPPSSAPASAS 232
            S+SCEVFLESGKAYT SVVCL G+    + S  P  S+ +   A        F GF +TVY ARP+Q+V GE+RPA+ GYF    S+HQA+S        S   +A    G+R       LQ+FAL  GAAL+VV    SA  F+LIN SSSE+ + LTLTSLEGATVS  +P S+ S       +   CP  SQ++ L+LARTADHG+F H F+YR+L P  +APA+ +
Sbjct:  259 SLSCEVFLESGKAYTASVVCLGGEDSDKILSGRPKFSAASTLLAESTG----FRGFRVTVYSARPLQIVPGEQRPASPGYFRAESSIHQALSR-----RSSEEILAKGIVGRRAVSVRNPLQSFALGGGAALSVVPMEGSALFFLLINVSSSEVVLRLTLTSLEGATVS--TPDSQASPDGKGMMSSTMCPARSQKIALVLARTADHGSFSHEFYYRVLRPAPTAPATTA 477
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1222.1389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHG4_9PHAE8.300e-4348.26Calpain catalytic domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1222contigS-dermatodea_contig1222:15170..19250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1222.1389.1mRNA_S-dermatodea_contig1222.1389.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1222 15168..19250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1222.1389.1 ID=prot_S-dermatodea_contig1222.1389.1|Name=mRNA_S-dermatodea_contig1222.1389.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=405bp
SNGGGTLVAACLGGAKRSISCEVFLESGKAYTCSVVCLTGQKGSLRSHTP
PLSSTTETTAAGVSTTAAFCGFLLTVYGARPIQVVAGEKRPAAVGYFPVG
PSLHQAVSHLWLEGHQSSSAIADDDGGQRLQAFALCRGAALAVVAAGDSA
ALFVLINTSSSEIGVALTLTSLEGATVSAASPLSETSNVVRCPPESQRVV
LLLARTADHGTFRHAFFYRLLTPPSSAPASASRPPGAKAAAAAQGAGCGK
EPSGDCHNHTTTTLSSSAATGCISSRSSTAGQRQRQAAVVDLCSSQDEDE
DEDEGRAEGREATVEAKPATKRPLPAPLETGATTINAAAIAPTLQCDSAT
PQITLAATARSTGGRPCERRCSKDTASITDDADSGFNGKKHLQERGGGRT
GLGGG
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