prot_S-dermatodea_contig12200.1381.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12200.1381.1
Unique Nameprot_S-dermatodea_contig12200.1381.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length77
Homology
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BLAST of mRNA_S-dermatodea_contig12200.1381.1 vs. uniprot
Match: D8LSB6_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB6_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.080e-12
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 0 
Query:    1 MVATAVEPYPLLKTLIADPAFQLFFAQLAAAGSSNQRFVP 40
            +V TAVEPYPLLK+L+AD AFQLFFAQLAAAG+SNQRFVP
Sbjct:  629 IVPTAVEPYPLLKSLVADQAFQLFFAQLAAAGNSNQRFVP 668
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BLAST of mRNA_S-dermatodea_contig12200.1381.1 vs. uniprot
Match: A0A6H5KXJ7_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ7_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.090e-12
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 0 
Query:    1 MVATAVEPYPLLKTLIADPAFQLFFAQLAAAGSSNQRFVP 40
            +V TAVEPYPLLK+L+AD AFQLFFAQLAAAG+SNQRFVP
Sbjct:  912 IVPTAVEPYPLLKSLVADQAFQLFFAQLAAAGNSNQRFVP 951
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12200.1381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSB6_ECTSI1.080e-1285.00Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A6H5KXJ7_9PHAE1.090e-1285.00Nudix hydrolase domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12200contigS-dermatodea_contig12200:6850..7080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12200.1381.1mRNA_S-dermatodea_contig12200.1381.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12200 6831..7081 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12200.1381.1 ID=prot_S-dermatodea_contig12200.1381.1|Name=mRNA_S-dermatodea_contig12200.1381.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=77bp
MVATAVEPYPLLKTLIADPAFQLFFAQLAAAGSSNQRFVPPPSVMTRRAE
HGAGAGTGNGEVARGAGGKGAGAPGY*
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